RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 DNAAF2Q9NVR5 837 aaKnown RBP9.72□□□□□ -0.85
VPS8-224ENST00000488255 KIAA1024Q9UPX6 916 aa9.72□□□□□ -0.85
VPS8-224ENST00000488255 RASA1P20936 1047 aa9.71□□□□□ -0.86
VPS8-224ENST00000488255 ATP1A2P50993 1020 aa9.71□□□□□ -0.86
VPS8-224ENST00000488255 CLDN10P78369 228 aa9.71□□□□□ -0.86
VPS8-224ENST00000488255 FHDC1Q9C0D6 1143 aaPredicted RBP9.71□□□□□ -0.86
VPS8-224ENST00000488255 HRH3Q9Y5N1 445 aa9.71□□□□□ -0.86
VPS8-224ENST00000488255 SENP3-EIF4A1A0A087X0R7 540 aa9.7□□□□□ -0.86
VPS8-224ENST00000488255 SLC35F4A4IF30 521 aa9.7□□□□□ -0.86
VPS8-224ENST00000488255 H3BM21 787 aa9.7□□□□□ -0.86
VPS8-224ENST00000488255 GNASQ5JWF2 1037 aa9.7□□□□□ -0.86
VPS8-224ENST00000488255 CCDC102BQ68D86 513 aa9.7□□□□□ -0.86
VPS8-224ENST00000488255 NBPF10Q6P3W6 841 aaKnown RBP9.7□□□□□ -0.86
VPS8-224ENST00000488255 TAS1R3Q7RTX0 852 aa9.7□□□□□ -0.86
VPS8-224ENST00000488255 NBPF15Q8N660 670 aa9.7□□□□□ -0.86
VPS8-224ENST00000488255 GAS2L1Q99501 681 aaPredicted RBP9.7□□□□□ -0.86
VPS8-224ENST00000488255 CDC14CA4D256 554 aa9.69□□□□□ -0.86
VPS8-224ENST00000488255 WASLO00401 505 aaPredicted RBP9.69□□□□□ -0.86
VPS8-224ENST00000488255 ZBTB7BO15156 539 aaPredicted RBP9.69□□□□□ -0.86
VPS8-224ENST00000488255 RIPOR1Q6ZS17 1223 aa9.69□□□□□ -0.86
VPS8-224ENST00000488255 ZNF358Q9NW07 568 aa9.69□□□□□ -0.86
VPS8-224ENST00000488255 SMTNP53814 917 aa9.68□□□□□ -0.86
VPS8-224ENST00000488255 CFAP70Q5T0N1 1121 aa9.68□□□□□ -0.86
VPS8-224ENST00000488255 LARP1Q6PKG0 1096 aaKnown RBP9.68□□□□□ -0.86
VPS8-224ENST00000488255 VRTNQ9H8Y1 702 aa9.68□□□□□ -0.86
VPS8-224ENST00000488255 TIMMDC1Q9NPL8 285 aa9.68□□□□□ -0.86
VPS8-224ENST00000488255 RBM19Q9Y4C8 960 aaKnown RBP9.68□□□□□ -0.86
VPS8-224ENST00000488255 ERBB4Q15303 1308 aa9.67□□□□□ -0.86
VPS8-224ENST00000488255 SPATA31C2B4DYI2 1134 aa9.67□□□□□ -0.86
VPS8-224ENST00000488255 C4orf17Q53FE4 359 aa9.67□□□□□ -0.86
VPS8-224ENST00000488255 NPAS3Q8IXF0 933 aa9.67□□□□□ -0.86
VPS8-224ENST00000488255 IRF7Q92985 503 aa9.67□□□□□ -0.86
VPS8-224ENST00000488255 CCDC97Q96F63 343 aaPredicted RBP9.67□□□□□ -0.86
VPS8-224ENST00000488255 A6NJY4 79 aa9.66□□□□□ -0.86
VPS8-224ENST00000488255 SFI1A8K8P3 1242 aa9.66□□□□□ -0.86
VPS8-224ENST00000488255 BACH1O14867 736 aa9.66□□□□□ -0.86
VPS8-224ENST00000488255 ITGA6P23229 1130 aa9.66□□□□□ -0.86
VPS8-224ENST00000488255 KANK4Q5T7N3 995 aaPredicted RBP9.66□□□□□ -0.86
VPS8-224ENST00000488255 LCE2CQ5TA81 110 aa9.66□□□□□ -0.86
VPS8-224ENST00000488255 VWA5B2Q8N398 1253 aa9.66□□□□□ -0.86
VPS8-224ENST00000488255 PLA2G4AP47712 749 aa9.65□□□□□ -0.86
VPS8-224ENST00000488255 CRTC2Q53ET0 693 aaPredicted RBP9.65□□□□□ -0.86
VPS8-224ENST00000488255 TBCELQ5QJ74 424 aa9.65□□□□□ -0.86
VPS8-224ENST00000488255 PPARGC1BQ86YN6 1023 aaKnown RBP9.65□□□□□ -0.86
VPS8-224ENST00000488255 TNS4Q8IZW8 715 aa9.65□□□□□ -0.86
VPS8-224ENST00000488255 LARGE2Q8N3Y3 721 aa9.65□□□□□ -0.86
VPS8-224ENST00000488255 RHBDD1Q8TEB9 315 aa9.65□□□□□ -0.86
VPS8-224ENST00000488255 GPAMQ9HCL2 828 aa9.65□□□□□ -0.86
VPS8-224ENST00000488255 CUEDC1Q9NWM3 386 aaPredicted RBP9.65□□□□□ -0.86
VPS8-224ENST00000488255 USP3Q9Y6I4 520 aa9.65□□□□□ -0.86
VPS8-224ENST00000488255 LGR5O75473 907 aa9.64□□□□□ -0.87
VPS8-224ENST00000488255 AIDAQ96BJ3 306 aa9.64□□□□□ -0.87
VPS8-224ENST00000488255 SLC4A9Q96Q91 983 aa9.64□□□□□ -0.87
VPS8-224ENST00000488255 CABP1Q9NZU7 370 aa9.64□□□□□ -0.87
VPS8-224ENST00000488255 GMPRP36959 345 aa9.63□□□□□ -0.87
VPS8-224ENST00000488255 DYRK1BQ9Y463 629 aa9.63□□□□□ -0.87
VPS8-224ENST00000488255 PARP3Q9Y6F1 533 aa9.63□□□□□ -0.87
VPS8-224ENST00000488255 DPYDQ12882 1025 aa9.62□□□□□ -0.87
VPS8-224ENST00000488255 LCE2AQ5TA79 106 aaPredicted RBP9.62□□□□□ -0.87
VPS8-224ENST00000488255 TSEN2Q8NCE0 465 aaKnown RBP9.62□□□□□ -0.87
VPS8-224ENST00000488255 NIFKQ9BYG3 293 aaKnown RBP9.62□□□□□ -0.87
VPS8-224ENST00000488255 USP17L15C9J2P7 530 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 USP17L10C9JJH3 530 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 USP17L13C9JLJ4 530 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 USP17L12C9JPN9 530 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 USP17L11C9JVI0 530 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 USP17L21D6R901 530 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 USP17L18D6R9N7 530 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 USP17L22D6RA61 530 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 USP17L17D6RBQ6 530 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 USP17L19D6RCP7 530 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 USP17L20D6RJB6 530 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 SUPT5HO00267 1087 aaKnown RBP9.61□□□□□ -0.87
VPS8-224ENST00000488255 CDK2AP1O14519 115 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 USP17L24Q0WX57 530 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 PTK7Q13308 1070 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 WDR44Q5JSH3 913 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 SV2AQ7L0J3 742 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 SIX5Q8N196 739 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 GPR161Q8N6U8 529 aaKnown RBP9.61□□□□□ -0.87
VPS8-224ENST00000488255 SERPINA10Q9UK55 444 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 TIMELESSQ9UNS1 1208 aa9.61□□□□□ -0.87
VPS8-224ENST00000488255 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.6□□□□□ -0.87
VPS8-224ENST00000488255 F11P03951 625 aa9.6□□□□□ -0.87
VPS8-224ENST00000488255 SEC13P55735 322 aa9.6□□□□□ -0.87
VPS8-224ENST00000488255 MTFR1Q15390 333 aa9.6□□□□□ -0.87
VPS8-224ENST00000488255 SLC9A9Q8IVB4 645 aa9.6□□□□□ -0.87
VPS8-224ENST00000488255 CCDC82Q8N4S0 544 aa9.6□□□□□ -0.87
VPS8-224ENST00000488255 HINFPQ9BQA5 517 aa9.6□□□□□ -0.87
VPS8-224ENST00000488255 SCHIP1Q9P0W5 487 aaPredicted RBP9.6□□□□□ -0.87
VPS8-224ENST00000488255 MSX1P28360 303 aa9.59□□□□□ -0.87
VPS8-224ENST00000488255 DBN1Q16643 649 aa9.59□□□□□ -0.87
VPS8-224ENST00000488255 ANKMY2Q8IV38 441 aa9.59□□□□□ -0.87
VPS8-224ENST00000488255 RUBCNLQ9H714 662 aa9.59□□□□□ -0.87
VPS8-224ENST00000488255 C1orf115Q9H7X2 142 aa9.59□□□□□ -0.87
VPS8-224ENST00000488255 ZNF232Q9UNY5 417 aa9.59□□□□□ -0.87
VPS8-224ENST00000488255 IQSEC3Q9UPP2 1182 aaPredicted RBP9.59□□□□□ -0.87
VPS8-224ENST00000488255 A0A1B0GTH6 734 aa9.58□□□□□ -0.88
VPS8-224ENST00000488255 FAM196BA6NMK8 535 aa9.58□□□□□ -0.88
VPS8-224ENST00000488255 GPR25O00155 361 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms