RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 FMN1Q68DA7 1419 aa6.13□□□□□ -1.43
CDC42BPA-213ENST00000488131 KIF27Q86VH2 1401 aa6.13□□□□□ -1.43
CDC42BPA-213ENST00000488131 RFX1P22670 979 aa6.13□□□□□ -1.43
CDC42BPA-213ENST00000488131 RETREG2Q8NC44 543 aa6.13□□□□□ -1.43
CDC42BPA-213ENST00000488131 EXOC6Q8TAG9 804 aa6.13□□□□□ -1.43
CDC42BPA-213ENST00000488131 TEX14Q8IWB6 1497 aa6.12□□□□□ -1.43
CDC42BPA-213ENST00000488131 INSRP06213 1382 aa6.12□□□□□ -1.43
CDC42BPA-213ENST00000488131 KTN1Q86UP2 1357 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-213ENST00000488131 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-213ENST00000488131 PALM3A6NDB9 673 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-213ENST00000488131 CCNYL3P0C7X3 344 aa6.12□□□□□ -1.43
CDC42BPA-213ENST00000488131 CTHP32929 405 aa6.12□□□□□ -1.43
CDC42BPA-213ENST00000488131 NR1H3Q13133 447 aa6.12□□□□□ -1.43
CDC42BPA-213ENST00000488131 PTCRAQ6ISU1 281 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-213ENST00000488131 TFIP11Q9UBB9 837 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-213ENST00000488131 KDM2BQ8NHM5 1336 aa6.12□□□□□ -1.43
CDC42BPA-213ENST00000488131 CAPN5O15484 640 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-213ENST00000488131 FOXK2Q01167 660 aa6.11□□□□□ -1.43
CDC42BPA-213ENST00000488131 KCNH2Q12809 1159 aa6.11□□□□□ -1.43
CDC42BPA-213ENST00000488131 TBC1D9Q6ZT07 1266 aa6.11□□□□□ -1.43
CDC42BPA-213ENST00000488131 EHBP1Q8NDI1 1231 aa6.11□□□□□ -1.43
CDC42BPA-213ENST00000488131 NUDT12Q9BQG2 462 aa6.11□□□□□ -1.43
CDC42BPA-213ENST00000488131 POGKQ9P215 609 aa6.11□□□□□ -1.43
CDC42BPA-213ENST00000488131 KIF7Q2M1P5 1343 aa6.11□□□□□ -1.43
CDC42BPA-213ENST00000488131 ZBBXA8MT70 800 aa6.11□□□□□ -1.43
CDC42BPA-213ENST00000488131 VSIG8P0DPA2 414 aa6.11□□□□□ -1.43
CDC42BPA-213ENST00000488131 PDIA4P13667 645 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-213ENST00000488131 RANGAP1P46060 587 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-213ENST00000488131 PDE3BQ13370 1112 aa6.11□□□□□ -1.43
CDC42BPA-213ENST00000488131 FAM50AQ14320 339 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-213ENST00000488131 E9PCH4 1651 aa6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 PTPRKQ15262 1439 aa6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 UNC13AQ9UPW8 1703 aa6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 EFCAB5A4FU69 1503 aa6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 PIK3CDO00329 1044 aa6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 VEGFBP49765 207 aa6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 SKOR1P84550 965 aa6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 PDE4CQ08493 712 aa6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 SEMA3FQ13275 785 aa6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 C8orf34Q49A92 452 aa6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 PNISRQ8TF01 805 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 RCAN3Q9UKA8 241 aa6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 ISY1Q9ULR0 285 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 DNMT3AQ9Y6K1 912 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 ARID4BQ4LE39 1312 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 CCDC144AA2RUR9 1427 aa6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 PLEKHH2Q8IVE3 1493 aa6.1□□□□□ -1.43
CDC42BPA-213ENST00000488131 XRCC6P12956 609 aaKnown RBP eCLIP6.09□□□□□ -1.43
CDC42BPA-213ENST00000488131 SOX11P35716 441 aa6.09□□□□□ -1.43
CDC42BPA-213ENST00000488131 TERF1P54274 439 aa6.09□□□□□ -1.43
CDC42BPA-213ENST00000488131 MAP7D2Q96T17 732 aa6.09□□□□□ -1.43
CDC42BPA-213ENST00000488131 CTTNBP2Q8WZ74 1663 aa6.09□□□□□ -1.43
CDC42BPA-213ENST00000488131 BRD4O60885 1362 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-213ENST00000488131 ROCK2O75116 1388 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-213ENST00000488131 CASKIN1Q8WXD9 1431 aa6.09□□□□□ -1.43
CDC42BPA-213ENST00000488131 RPRD2Q5VT52 1461 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-213ENST00000488131 THOC2Q8NI27 1593 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-213ENST00000488131 BCORL1Q5H9F3 1711 aa6.09□□□□□ -1.44
CDC42BPA-213ENST00000488131 LMOD1P29536 600 aaPredicted RBP6.09□□□□□ -1.44
CDC42BPA-213ENST00000488131 PBXIP1Q96AQ6 731 aa6.09□□□□□ -1.44
CDC42BPA-213ENST00000488131 PSMG3-AS1Q96PY0 264 aa6.09□□□□□ -1.44
CDC42BPA-213ENST00000488131 TRAIPQ9BWF2 469 aa6.09□□□□□ -1.44
CDC42BPA-213ENST00000488131 NLRP1Q9C000 1473 aa6.08□□□□□ -1.44
CDC42BPA-213ENST00000488131 A0A0U1RQG5 324 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-213ENST00000488131 SCARF1Q14162 830 aa6.08□□□□□ -1.44
CDC42BPA-213ENST00000488131 MAFBQ9Y5Q3 323 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-213ENST00000488131 ZC3H4Q9UPT8 1303 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-213ENST00000488131 MBD5Q9P267 1494 aa6.08□□□□□ -1.44
CDC42BPA-213ENST00000488131 CARNS1A5YM72 827 aa6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 GOLGA6L3A6NEY3 463 aa6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 ESPNB1AK53 854 aa6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 SIAH2O43255 324 aa6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 CDCA8Q53HL2 280 aa6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 PDXDC2PQ6P474 469 aa6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 CENPQQ7L2Z9 268 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 SMAP1Q8IYB5 467 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 PNMA1Q8ND90 353 aa6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 FAM174AQ8TBP5 190 aa6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 UNC93B1Q9H1C4 597 aa6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 KIF14Q15058 1648 aa6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 KDM5CP41229 1560 aa6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 FGD5Q6ZNL6 1462 aa6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 MRE11P49959 708 aa6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 KRTAP9-2Q9BYQ4 174 aa6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 ANTXR1Q9H6X2 564 aa6.07□□□□□ -1.44
CDC42BPA-213ENST00000488131 ARHGEF11O15085 1522 aa6.06□□□□□ -1.44
CDC42BPA-213ENST00000488131 TCOF1Q13428 1488 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-213ENST00000488131 SCAPERQ9BY12 1400 aa6.06□□□□□ -1.44
CDC42BPA-213ENST00000488131 GPAT2Q6NUI2 795 aa6.06□□□□□ -1.44
CDC42BPA-213ENST00000488131 BLMP54132 1417 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-213ENST00000488131 ZMYM3Q14202 1370 aa6.05□□□□□ -1.44
CDC42BPA-213ENST00000488131 USP19O94966 1318 aa6.05□□□□□ -1.44
CDC42BPA-213ENST00000488131 ATP9BO43861 1147 aa6.05□□□□□ -1.44
CDC42BPA-213ENST00000488131 UTP14CQ5TAP6 766 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-213ENST00000488131 SH3BP5LQ7L8J4 393 aa6.05□□□□□ -1.44
CDC42BPA-213ENST00000488131 TRIM46Q7Z4K8 759 aa6.05□□□□□ -1.44
CDC42BPA-213ENST00000488131 PHTF2Q8N3S3 785 aa6.05□□□□□ -1.44
CDC42BPA-213ENST00000488131 KIF15Q9NS87 1388 aa6.05□□□□□ -1.44
CDC42BPA-213ENST00000488131 MTERF4Q7Z6M4 381 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms