RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 BRCA1P38398 1863 aaKnown RBP15.31■□□□□ 0.04
RAB11FIP3-210ENST00000487899 LOC102724428A0A0B4J2F2 783 aa15.3■□□□□ 0.04
RAB11FIP3-210ENST00000487899 SIK1P57059 783 aa15.3■□□□□ 0.04
RAB11FIP3-210ENST00000487899 ZNF530Q6P9A1 599 aaPredicted RBP15.3■□□□□ 0.04
RAB11FIP3-210ENST00000487899 LINC00116Q8NCU8 138 aa15.3■□□□□ 0.04
RAB11FIP3-210ENST00000487899 ITPK1Q13572 414 aa15.29■□□□□ 0.04
RAB11FIP3-210ENST00000487899 SULT6B1Q6IMI4 303 aa15.29■□□□□ 0.04
RAB11FIP3-210ENST00000487899 KCPQ6ZWJ8 1503 aa15.28■□□□□ 0.04
RAB11FIP3-210ENST00000487899 MTHFSP49914 203 aa15.28■□□□□ 0.04
RAB11FIP3-210ENST00000487899 CC2D1BQ5T0F9 858 aaKnown RBP15.28■□□□□ 0.04
RAB11FIP3-210ENST00000487899 DCAF5Q96JK2 942 aa15.28■□□□□ 0.04
RAB11FIP3-210ENST00000487899 ATG3Q9NT62 314 aa15.28■□□□□ 0.04
RAB11FIP3-210ENST00000487899 N4BP2Q86UW6 1770 aaPredicted RBP15.27■□□□□ 0.04
RAB11FIP3-210ENST00000487899 ERVV-2B6SEH9 535 aa15.27■□□□□ 0.04
RAB11FIP3-210ENST00000487899 POLD1P28340 1107 aa15.27■□□□□ 0.04
RAB11FIP3-210ENST00000487899 AMOTQ4VCS5 1084 aa15.27■□□□□ 0.04
RAB11FIP3-210ENST00000487899 PLEKHO1Q53GL0 409 aaPredicted RBP15.27■□□□□ 0.04
RAB11FIP3-210ENST00000487899 MSL1Q68DK7 614 aa15.27■□□□□ 0.04
RAB11FIP3-210ENST00000487899 AK7Q96M32 723 aa15.27■□□□□ 0.04
RAB11FIP3-210ENST00000487899 SLC4A9Q96Q91 983 aa15.27■□□□□ 0.04
RAB11FIP3-210ENST00000487899 DLG5Q8TDM6 1919 aa15.26■□□□□ 0.03
RAB11FIP3-210ENST00000487899 SMIM5Q71RC9 77 aa15.26■□□□□ 0.03
RAB11FIP3-210ENST00000487899 HSP90AB1P08238 724 aaKnown RBP15.25■□□□□ 0.03
RAB11FIP3-210ENST00000487899 NLGN2Q8NFZ4 835 aa15.25■□□□□ 0.03
RAB11FIP3-210ENST00000487899 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.24■□□□□ 0.03
RAB11FIP3-210ENST00000487899 MSH5O43196 834 aa15.24■□□□□ 0.03
RAB11FIP3-210ENST00000487899 SSFA2P28290 1259 aa15.24■□□□□ 0.03
RAB11FIP3-210ENST00000487899 SCN7AQ01118 1682 aa15.24■□□□□ 0.03
RAB11FIP3-210ENST00000487899 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
RAB11FIP3-210ENST00000487899 PHF14O94880 888 aa15.23■□□□□ 0.03
RAB11FIP3-210ENST00000487899 ATP6V1AP38606 617 aa15.23■□□□□ 0.03
RAB11FIP3-210ENST00000487899 FLAD1Q8NFF5 587 aa15.23■□□□□ 0.03
RAB11FIP3-210ENST00000487899 AFDNP55196 1824 aaKnown RBP15.22■□□□□ 0.03
RAB11FIP3-210ENST00000487899 GNPATO15228 680 aa15.22■□□□□ 0.03
RAB11FIP3-210ENST00000487899 HMOX1P09601 288 aa15.22■□□□□ 0.03
RAB11FIP3-210ENST00000487899 HMGB2P26583 209 aaKnown RBP15.22■□□□□ 0.03
RAB11FIP3-210ENST00000487899 C1orf141Q5JVX7 400 aa15.22■□□□□ 0.03
RAB11FIP3-210ENST00000487899 KLHL34Q8N239 644 aa15.22■□□□□ 0.03
RAB11FIP3-210ENST00000487899 CNTNAP4Q9C0A0 1308 aa15.21■□□□□ 0.03
RAB11FIP3-210ENST00000487899 DIAPH1O60610 1272 aaKnown RBP15.21■□□□□ 0.03
RAB11FIP3-210ENST00000487899 ARFGEF1Q9Y6D6 1849 aa15.21■□□□□ 0.03
RAB11FIP3-210ENST00000487899 DLEC1Q9Y238 1755 aa15.21■□□□□ 0.02
RAB11FIP3-210ENST00000487899 NRXN2Q9P2S2 1712 aa15.2■□□□□ 0.02
RAB11FIP3-210ENST00000487899 CABP4P57796 275 aa15.2■□□□□ 0.02
RAB11FIP3-210ENST00000487899 AKAP4Q5JQC9 854 aa15.2■□□□□ 0.02
RAB11FIP3-210ENST00000487899 BCORQ6W2J9 1755 aa15.2■□□□□ 0.02
RAB11FIP3-210ENST00000487899 LAMB4A4D0S4 1761 aa15.19■□□□□ 0.02
RAB11FIP3-210ENST00000487899 ZNF784Q8NCA9 323 aaPredicted RBP15.19■□□□□ 0.02
RAB11FIP3-210ENST00000487899 C10orf71Q711Q0 1435 aa15.18■□□□□ 0.02
RAB11FIP3-210ENST00000487899 CNGB1Q14028 1251 aaPredicted RBP15.18■□□□□ 0.02
RAB11FIP3-210ENST00000487899 MTHFSDQ2M296 383 aaKnown RBP15.18■□□□□ 0.02
RAB11FIP3-210ENST00000487899 NFATC2IPQ8NCF5 419 aa15.18■□□□□ 0.02
RAB11FIP3-210ENST00000487899 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
RAB11FIP3-210ENST00000487899 PXDNLA1KZ92 1463 aa15.17■□□□□ 0.02
RAB11FIP3-210ENST00000487899 YBX3P16989 372 aaKnown RBP eCLIP15.17■□□□□ 0.02
RAB11FIP3-210ENST00000487899 KDM3BQ7LBC6 1761 aa15.16■□□□□ 0.02
RAB11FIP3-210ENST00000487899 PTCD1O75127 700 aaKnown RBP15.16■□□□□ 0.02
RAB11FIP3-210ENST00000487899 SLC52A2Q9HAB3 445 aa15.16■□□□□ 0.02
RAB11FIP3-210ENST00000487899 LGR6Q9HBX8 967 aa15.16■□□□□ 0.02
RAB11FIP3-210ENST00000487899 RC3H1Q5TC82 1133 aaKnown RBP15.15■□□□□ 0.02
RAB11FIP3-210ENST00000487899 CD2APQ9Y5K6 639 aa15.15■□□□□ 0.02
RAB11FIP3-210ENST00000487899 RNMTO43148 476 aaKnown RBP15.14■□□□□ 0.01
RAB11FIP3-210ENST00000487899 ADRA2BP18089 450 aa15.14■□□□□ 0.01
RAB11FIP3-210ENST00000487899 GPR162Q16538 588 aa15.14■□□□□ 0.01
RAB11FIP3-210ENST00000487899 RTCBQ9Y3I0 505 aaKnown RBP15.14■□□□□ 0.01
RAB11FIP3-210ENST00000487899 ANKRD31Q8N7Z5 1873 aa15.14■□□□□ 0.01
RAB11FIP3-210ENST00000487899 CEMIPQ8WUJ3 1361 aa15.13■□□□□ 0.01
RAB11FIP3-210ENST00000487899 U2SURPO15042 1029 aaKnown RBP15.13■□□□□ 0.01
RAB11FIP3-210ENST00000487899 CRKLP46109 303 aaKnown RBP15.13■□□□□ 0.01
RAB11FIP3-210ENST00000487899 COL11A2P13942 1736 aaPredicted RBP15.12■□□□□ 0.01
RAB11FIP3-210ENST00000487899 RPS6KA4O75676 772 aa15.12■□□□□ 0.01
RAB11FIP3-210ENST00000487899 PPP2R1AP30153 589 aa15.12■□□□□ 0.01
RAB11FIP3-210ENST00000487899 PELP1Q8IZL8 1130 aaKnown RBP15.12■□□□□ 0.01
RAB11FIP3-210ENST00000487899 ARHGEF1Q92888 912 aaKnown RBP15.12■□□□□ 0.01
RAB11FIP3-210ENST00000487899 RSPH6AQ9H0K4 717 aa15.12■□□□□ 0.01
RAB11FIP3-210ENST00000487899 MMP10P09238 476 aa15.11■□□□□ 0.01
RAB11FIP3-210ENST00000487899 GYS1P13807 737 aa15.11■□□□□ 0.01
RAB11FIP3-210ENST00000487899 SLC39A6Q13433 755 aa15.11■□□□□ 0.01
RAB11FIP3-210ENST00000487899 USP42Q9H9J4 1324 aaKnown RBP15.11■□□□□ 0.01
RAB11FIP3-210ENST00000487899 ADCY9O60503 1353 aa15.11■□□□□ 0.01
RAB11FIP3-210ENST00000487899 TRAPPC3LQ5T215 181 aa15.1■□□□□ 0.01
RAB11FIP3-210ENST00000487899 INTS5Q6P9B9 1019 aaKnown RBP15.1■□□□□ 0.01
RAB11FIP3-210ENST00000487899 DNAJC10Q8IXB1 793 aa15.1■□□□□ 0.01
RAB11FIP3-210ENST00000487899 SOS1Q07889 1333 aaPredicted RBP15.1■□□□□ 0.01
RAB11FIP3-210ENST00000487899 COL15A1P39059 1388 aa15.1■□□□□ 0.01
RAB11FIP3-210ENST00000487899 CACNA1SQ13698 1873 aa15.1■□□□□ 0.01
RAB11FIP3-210ENST00000487899 GAS2L2Q8NHY3 880 aa15.09■□□□□ 0.01
RAB11FIP3-210ENST00000487899 SBF1O95248 1867 aa15.08■□□□□ 0.01
RAB11FIP3-210ENST00000487899 PRKAR2BP31323 418 aa15.08■□□□□ 0
RAB11FIP3-210ENST00000487899 IL17REQ8NFR9 667 aa15.08■□□□□ 0
RAB11FIP3-210ENST00000487899 PHACTR3Q96KR7 559 aa15.08■□□□□ 0
RAB11FIP3-210ENST00000487899 CFAP53Q96M91 514 aa15.08■□□□□ 0
RAB11FIP3-210ENST00000487899 CCDC87Q9NVE4 849 aa15.08■□□□□ 0
RAB11FIP3-210ENST00000487899 SRP68Q9UHB9 627 aaKnown RBP15.08■□□□□ 0
RAB11FIP3-210ENST00000487899 ARFGEF2Q9Y6D5 1785 aa15.08■□□□□ 0
RAB11FIP3-210ENST00000487899 CYP19A1P11511 503 aaPredicted RBP15.07■□□□□ 0
RAB11FIP3-210ENST00000487899 RFC4P35249 363 aa15.07■□□□□ 0
RAB11FIP3-210ENST00000487899 C1QTNF8P60827 252 aa15.07■□□□□ 0
RAB11FIP3-210ENST00000487899 ZBTB1Q9Y2K1 713 aa15.07■□□□□ 0
RAB11FIP3-210ENST00000487899 GNAT3A8MTJ3 354 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms