RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 KLRG1Q96E93 195 aa8.28□□□□□ -1.08
HMGB1P36-201ENST00000487709 CFHR5Q9BXR6 569 aa8.28□□□□□ -1.08
HMGB1P36-201ENST00000487709 MKL2Q9ULH7 1088 aa8.28□□□□□ -1.08
HMGB1P36-201ENST00000487709 PHF24Q9UPV7 400 aa8.28□□□□□ -1.08
HMGB1P36-201ENST00000487709 MCCD1P59942 119 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P36-201ENST00000487709 CENPCQ03188 943 aa8.27□□□□□ -1.09
HMGB1P36-201ENST00000487709 ESYT1Q9BSJ8 1104 aa8.27□□□□□ -1.09
HMGB1P36-201ENST00000487709 RUBCNLQ9H714 662 aa8.27□□□□□ -1.09
HMGB1P36-201ENST00000487709 ZNF330Q9Y3S2 320 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P36-201ENST00000487709 A0A1B0GTH6 734 aa8.26□□□□□ -1.09
HMGB1P36-201ENST00000487709 GNRH1P01148 92 aa8.26□□□□□ -1.09
HMGB1P36-201ENST00000487709 BAG6P46379 1132 aa8.26□□□□□ -1.09
HMGB1P36-201ENST00000487709 ZSCAN10Q96SZ4 725 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P36-201ENST00000487709 GOPCQ9HD26 462 aa8.26□□□□□ -1.09
HMGB1P36-201ENST00000487709 MYCP01106 439 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P36-201ENST00000487709 CSB-PGBD3P0DP91 1061 aa8.25□□□□□ -1.09
HMGB1P36-201ENST00000487709 AMPD1P23109 780 aa8.25□□□□□ -1.09
HMGB1P36-201ENST00000487709 COL8A1P27658 744 aa8.25□□□□□ -1.09
HMGB1P36-201ENST00000487709 GTF2E1P29083 439 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P36-201ENST00000487709 GNASQ5JWF2 1037 aa8.25□□□□□ -1.09
HMGB1P36-201ENST00000487709 TMEM214Q6NUQ4 689 aaKnown RBP8.25□□□□□ -1.09
HMGB1P36-201ENST00000487709 PGBD3Q8N328 593 aa8.25□□□□□ -1.09
HMGB1P36-201ENST00000487709 EDARADDQ8WWZ3 215 aa8.25□□□□□ -1.09
HMGB1P36-201ENST00000487709 ZNF592Q92610 1267 aa8.25□□□□□ -1.09
HMGB1P36-201ENST00000487709 CDCA7Q9BWT1 371 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P36-201ENST00000487709 GDF2Q9UK05 429 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P36-201ENST00000487709 GRIN2CQ14957 1233 aa8.24□□□□□ -1.09
HMGB1P36-201ENST00000487709 FURINP09958 794 aa8.23□□□□□ -1.09
HMGB1P36-201ENST00000487709 BMP4P12644 408 aa8.23□□□□□ -1.09
HMGB1P36-201ENST00000487709 C4orf17Q53FE4 359 aa8.23□□□□□ -1.09
HMGB1P36-201ENST00000487709 GOLGA6L1Q8N7Z2 621 aa8.23□□□□□ -1.09
HMGB1P36-201ENST00000487709 IL27Q8NEV9 243 aa8.23□□□□□ -1.09
HMGB1P36-201ENST00000487709 ABHD17AQ96GS6 310 aa8.23□□□□□ -1.09
HMGB1P36-201ENST00000487709 CCDC85AQ96PX6 553 aaPredicted RBP8.23□□□□□ -1.09
HMGB1P36-201ENST00000487709 GPR37L1O60883 481 aa8.22□□□□□ -1.09
HMGB1P36-201ENST00000487709 MSX1P28360 303 aa8.22□□□□□ -1.09
HMGB1P36-201ENST00000487709 UBAP2LQ14157 1087 aaKnown RBP8.22□□□□□ -1.09
HMGB1P36-201ENST00000487709 EFHC2Q5JST6 749 aa8.22□□□□□ -1.09
HMGB1P36-201ENST00000487709 SUV39H2Q9H5I1 410 aa8.22□□□□□ -1.09
HMGB1P36-201ENST00000487709 HRH3Q9Y5N1 445 aa8.22□□□□□ -1.09
HMGB1P36-201ENST00000487709 NDUFB9Q9Y6M9 179 aa8.22□□□□□ -1.09
HMGB1P36-201ENST00000487709 C2CD2LO14523 706 aa8.21□□□□□ -1.1
HMGB1P36-201ENST00000487709 STAU1O95793 577 aaKnown RBP8.21□□□□□ -1.1
HMGB1P36-201ENST00000487709 FHDC1Q9C0D6 1143 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P36-201ENST00000487709 GGA1Q9UJY5 639 aa8.21□□□□□ -1.1
HMGB1P36-201ENST00000487709 ATXN7L1Q9ULK2 861 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P36-201ENST00000487709 FGFR3P22607 806 aa8.2□□□□□ -1.1
HMGB1P36-201ENST00000487709 LBRQ14739 615 aaKnown RBP8.2□□□□□ -1.1
HMGB1P36-201ENST00000487709 MTMR14Q8NCE2 650 aa8.2□□□□□ -1.1
HMGB1P36-201ENST00000487709 XAGE2Q96GT9 111 aa8.2□□□□□ -1.1
HMGB1P36-201ENST00000487709 BNIP3LO60238 219 aa8.19□□□□□ -1.1
HMGB1P36-201ENST00000487709 PRKCSHP14314 528 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P36-201ENST00000487709 CTBSQ01459 385 aa8.19□□□□□ -1.1
HMGB1P36-201ENST00000487709 SLCO4C1Q6ZQN7 724 aa8.19□□□□□ -1.1
HMGB1P36-201ENST00000487709 ALYREFQ86V81 257 aaKnown RBP8.19□□□□□ -1.1
HMGB1P36-201ENST00000487709 CEP126Q9P2H0 1117 aa8.19□□□□□ -1.1
HMGB1P36-201ENST00000487709 NEUROD2Q15784 382 aa8.18□□□□□ -1.1
HMGB1P36-201ENST00000487709 ESCO1Q5FWF5 840 aa8.18□□□□□ -1.1
HMGB1P36-201ENST00000487709 RHBDD1Q8TEB9 315 aa8.18□□□□□ -1.1
HMGB1P36-201ENST00000487709 HOXB4P17483 251 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P36-201ENST00000487709 PLA2G4AP47712 749 aa8.17□□□□□ -1.1
HMGB1P36-201ENST00000487709 TLR1Q15399 786 aa8.17□□□□□ -1.1
HMGB1P36-201ENST00000487709 LINC00114Q6XXX2 140 aa8.17□□□□□ -1.1
HMGB1P36-201ENST00000487709 Q8N3U1 123 aa8.17□□□□□ -1.1
HMGB1P36-201ENST00000487709 ETNK1Q9HBU6 452 aa8.17□□□□□ -1.1
HMGB1P36-201ENST00000487709 GNB5O14775 395 aa8.16□□□□□ -1.1
HMGB1P36-201ENST00000487709 SNRKQ9NRH2 765 aa8.16□□□□□ -1.1
HMGB1P36-201ENST00000487709 NDFIP2Q9NV92 336 aa8.16□□□□□ -1.1
HMGB1P36-201ENST00000487709 DOLKQ9UPQ8 538 aa8.16□□□□□ -1.1
HMGB1P36-201ENST00000487709 NEURL1BA8MQ27 555 aa8.15□□□□□ -1.1
HMGB1P36-201ENST00000487709 C1QTNF9BB2RNN3 333 aa8.15□□□□□ -1.1
HMGB1P36-201ENST00000487709 TSGA10IPQ3SY00 556 aa8.15□□□□□ -1.1
HMGB1P36-201ENST00000487709 TBC1D9Q6ZT07 1266 aa8.15□□□□□ -1.1
HMGB1P36-201ENST00000487709 BANK1Q8NDB2 785 aa8.15□□□□□ -1.1
HMGB1P36-201ENST00000487709 APBB1O00213 710 aa8.14□□□□□ -1.11
HMGB1P36-201ENST00000487709 EPXP11678 715 aa8.14□□□□□ -1.11
HMGB1P36-201ENST00000487709 OXLD1Q5BKU9 147 aa8.14□□□□□ -1.11
HMGB1P36-201ENST00000487709 PPARGC1BQ86YN6 1023 aaKnown RBP8.14□□□□□ -1.11
HMGB1P36-201ENST00000487709 RNF135Q8IUD6 432 aa8.14□□□□□ -1.11
HMGB1P36-201ENST00000487709 BTBD6Q96KE9 485 aa8.14□□□□□ -1.11
HMGB1P36-201ENST00000487709 CRISPLD1Q9H336 500 aa8.14□□□□□ -1.11
HMGB1P36-201ENST00000487709 PIK3R2O00459 728 aa8.13□□□□□ -1.11
HMGB1P36-201ENST00000487709 CHRNA4P43681 627 aa8.13□□□□□ -1.11
HMGB1P36-201ENST00000487709 DGKGP49619 791 aa8.13□□□□□ -1.11
HMGB1P36-201ENST00000487709 USP4Q13107 963 aa8.13□□□□□ -1.11
HMGB1P36-201ENST00000487709 CD163Q86VB7 1156 aa8.13□□□□□ -1.11
HMGB1P36-201ENST00000487709 DCDC2BA2VCK2 349 aa8.12□□□□□ -1.11
HMGB1P36-201ENST00000487709 SOCS7O14512 581 aa8.12□□□□□ -1.11
HMGB1P36-201ENST00000487709 ARAFP10398 606 aa8.12□□□□□ -1.11
HMGB1P36-201ENST00000487709 FIGNL1Q6PIW4 674 aa8.12□□□□□ -1.11
HMGB1P36-201ENST00000487709 AIDAQ96BJ3 306 aa8.12□□□□□ -1.11
HMGB1P36-201ENST00000487709 ZCCHC2Q9C0B9 1178 aaKnown RBP8.12□□□□□ -1.11
HMGB1P36-201ENST00000487709 ATP4AP20648 1035 aa8.11□□□□□ -1.11
HMGB1P36-201ENST00000487709 SLFNL1Q499Z3 407 aa8.11□□□□□ -1.11
HMGB1P36-201ENST00000487709 DNAAF2Q9NVR5 837 aaKnown RBP8.11□□□□□ -1.11
HMGB1P36-201ENST00000487709 NOP53Q9NZM5 478 aaKnown RBP8.11□□□□□ -1.11
HMGB1P36-201ENST00000487709 PCDHGC4Q9Y5F7 938 aa8.11□□□□□ -1.11
HMGB1P36-201ENST00000487709 CD33P20138 364 aa8.1□□□□□ -1.11
HMGB1P36-201ENST00000487709 CHSY3Q70JA7 882 aa8.1□□□□□ -1.11
HMGB1P36-201ENST00000487709 TBC1D2BQ9UPU7 963 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms