RNA–Protein interactions for RNA: ENST00000487704.5

RTCB-205, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-205ENST00000487704 GNPATO15228 680 aa11.2□□□□□ -0.62
RTCB-205ENST00000487704 DPY19L2Q6NUT2 758 aa11.2□□□□□ -0.62
RTCB-205ENST00000487704 MPRIPQ6WCQ1 1025 aa11.2□□□□□ -0.62
RTCB-205ENST00000487704 LINC00116Q8NCU8 138 aa11.2□□□□□ -0.62
RTCB-205ENST00000487704 PARP3Q9Y6F1 533 aa11.19□□□□□ -0.62
RTCB-205ENST00000487704 LOC102724428A0A0B4J2F2 783 aa11.18□□□□□ -0.62
RTCB-205ENST00000487704 RASSF10A6NK89 507 aa11.18□□□□□ -0.62
RTCB-205ENST00000487704 SIK1P57059 783 aa11.18□□□□□ -0.62
RTCB-205ENST00000487704 TRAPPC3LQ5T215 181 aa11.18□□□□□ -0.62
RTCB-205ENST00000487704 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
RTCB-205ENST00000487704 FAM208AQ9UK61 1670 aaKnown RBP11.17□□□□□ -0.62
RTCB-205ENST00000487704 KTN1Q86UP2 1357 aaKnown RBP11.17□□□□□ -0.62
RTCB-205ENST00000487704 GYS1P13807 737 aa11.17□□□□□ -0.62
RTCB-205ENST00000487704 RASSF7Q02833 373 aa11.17□□□□□ -0.62
RTCB-205ENST00000487704 DEFB115Q30KQ5 88 aa11.17□□□□□ -0.62
RTCB-205ENST00000487704 MEGF6O75095 1541 aa11.17□□□□□ -0.62
RTCB-205ENST00000487704 LTN1O94822 1766 aa11.17□□□□□ -0.62
RTCB-205ENST00000487704 C4AP0C0L4 1744 aa11.17□□□□□ -0.62
RTCB-205ENST00000487704 ITGBL1O95965 494 aaPredicted RBP11.16□□□□□ -0.62
RTCB-205ENST00000487704 ADRA2BP18089 450 aa11.16□□□□□ -0.62
RTCB-205ENST00000487704 PPARGC1BQ86YN6 1023 aaKnown RBP11.16□□□□□ -0.62
RTCB-205ENST00000487704 LTV1Q96GA3 475 aaPredicted RBP11.16□□□□□ -0.62
RTCB-205ENST00000487704 MCOLN1Q9GZU1 580 aa11.16□□□□□ -0.62
RTCB-205ENST00000487704 EVC2Q86UK5 1308 aa11.15□□□□□ -0.62
RTCB-205ENST00000487704 WDR33Q9C0J8 1336 aaKnown RBP11.15□□□□□ -0.62
RTCB-205ENST00000487704 POTEIP0CG38 1075 aa11.15□□□□□ -0.62
RTCB-205ENST00000487704 POTEJP0CG39 1038 aa11.15□□□□□ -0.62
RTCB-205ENST00000487704 ITPK1Q13572 414 aa11.15□□□□□ -0.62
RTCB-205ENST00000487704 PIGBQ92521 554 aa11.15□□□□□ -0.62
RTCB-205ENST00000487704 RTCBQ9Y3I0 505 aaKnown RBP11.15□□□□□ -0.62
RTCB-205ENST00000487704 MAP2P11137 1827 aaKnown RBP11.14□□□□□ -0.63
RTCB-205ENST00000487704 CHRNA5P30532 468 aa11.14□□□□□ -0.63
RTCB-205ENST00000487704 NBPF1Q3BBV0 1214 aa11.14□□□□□ -0.63
RTCB-205ENST00000487704 LDHDQ86WU2 507 aa11.14□□□□□ -0.63
RTCB-205ENST00000487704 NME9Q86XW9 330 aa11.14□□□□□ -0.63
RTCB-205ENST00000487704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.14□□□□□ -0.63
RTCB-205ENST00000487704 ARHGEF1Q92888 912 aaKnown RBP11.14□□□□□ -0.63
RTCB-205ENST00000487704 BEGAINQ9BUH8 593 aa11.14□□□□□ -0.63
RTCB-205ENST00000487704 PCDH11XQ9BZA7 1347 aa11.13□□□□□ -0.63
RTCB-205ENST00000487704 PCDH11YQ9BZA8 1340 aa11.13□□□□□ -0.63
RTCB-205ENST00000487704 CD163L1Q9NR16 1453 aa11.12□□□□□ -0.63
RTCB-205ENST00000487704 ATP6V1AP38606 617 aa11.12□□□□□ -0.63
RTCB-205ENST00000487704 RC3H1Q5TC82 1133 aaKnown RBP11.12□□□□□ -0.63
RTCB-205ENST00000487704 RAPGEF4Q8WZA2 1011 aa11.12□□□□□ -0.63
RTCB-205ENST00000487704 MAP3K19Q56UN5 1328 aa11.11□□□□□ -0.63
RTCB-205ENST00000487704 CYP27B1O15528 508 aa11.11□□□□□ -0.63
RTCB-205ENST00000487704 RFC4P35249 363 aa11.11□□□□□ -0.63
RTCB-205ENST00000487704 GCC1Q96CN9 775 aa11.11□□□□□ -0.63
RTCB-205ENST00000487704 NFKBIEO00221 500 aa11.1□□□□□ -0.63
RTCB-205ENST00000487704 HOXC9P31274 260 aa11.1□□□□□ -0.63
RTCB-205ENST00000487704 NKX1-1Q15270 411 aaPredicted RBP11.1□□□□□ -0.63
RTCB-205ENST00000487704 NBPF6Q5VWK0 638 aa11.1□□□□□ -0.63
RTCB-205ENST00000487704 NBPF4Q96M43 638 aa11.1□□□□□ -0.63
RTCB-205ENST00000487704 SBNO2Q9Y2G9 1366 aa11.1□□□□□ -0.63
RTCB-205ENST00000487704 IQCA1LA6NCM1 817 aa11.09□□□□□ -0.63
RTCB-205ENST00000487704 CA12O43570 354 aa11.09□□□□□ -0.63
RTCB-205ENST00000487704 RPS6KA4O75676 772 aa11.09□□□□□ -0.63
RTCB-205ENST00000487704 TATP17735 454 aaPredicted RBP11.09□□□□□ -0.63
RTCB-205ENST00000487704 ERFEQ4G0M1 354 aa11.09□□□□□ -0.63
RTCB-205ENST00000487704 ASAP1Q9ULH1 1129 aa11.09□□□□□ -0.63
RTCB-205ENST00000487704 ITGB4P16144 1822 aa11.09□□□□□ -0.63
RTCB-205ENST00000487704 TIAM2Q8IVF5 1701 aa11.09□□□□□ -0.63
RTCB-205ENST00000487704 DDNO94850 711 aaPredicted RBP11.08□□□□□ -0.64
RTCB-205ENST00000487704 DDR1Q08345 913 aa11.08□□□□□ -0.64
RTCB-205ENST00000487704 DGKZQ13574 1117 aa11.08□□□□□ -0.64
RTCB-205ENST00000487704 TTLL6Q8N841 843 aa11.08□□□□□ -0.64
RTCB-205ENST00000487704 TAF1DQ9H5J8 278 aaPredicted RBP11.08□□□□□ -0.64
RTCB-205ENST00000487704 MON2Q7Z3U7 1717 aa11.08□□□□□ -0.64
RTCB-205ENST00000487704 CCDC88AQ3V6T2 1871 aa11.07□□□□□ -0.64
RTCB-205ENST00000487704 ECE1P42892 770 aa11.07□□□□□ -0.64
RTCB-205ENST00000487704 L3MBTL3Q96JM7 780 aaPredicted RBP11.07□□□□□ -0.64
RTCB-205ENST00000487704 GPR101Q96P66 508 aaPredicted RBP11.07□□□□□ -0.64
RTCB-205ENST00000487704 SMG6Q86US8 1419 aaKnown RBP11.07□□□□□ -0.64
RTCB-205ENST00000487704 THSD7BQ9C0I4 1608 aa11.06□□□□□ -0.64
RTCB-205ENST00000487704 TM4SF1P30408 202 aa11.06□□□□□ -0.64
RTCB-205ENST00000487704 MAP2K2P36507 400 aa11.06□□□□□ -0.64
RTCB-205ENST00000487704 AMPHP49418 695 aa11.06□□□□□ -0.64
RTCB-205ENST00000487704 FKBP8Q14318 412 aa11.06□□□□□ -0.64
RTCB-205ENST00000487704 CAPNS2Q96L46 248 aa11.06□□□□□ -0.64
RTCB-205ENST00000487704 ABT1Q9ULW3 272 aaKnown RBP11.06□□□□□ -0.64
RTCB-205ENST00000487704 CNTNAP4Q9C0A0 1308 aa11.06□□□□□ -0.64
RTCB-205ENST00000487704 RGPD2P0DJD1 1756 aa11.05□□□□□ -0.64
RTCB-205ENST00000487704 POLRMTO00411 1230 aaKnown RBP11.05□□□□□ -0.64
RTCB-205ENST00000487704 CNTROBQ8N137 903 aa11.05□□□□□ -0.64
RTCB-205ENST00000487704 ATG3Q9NT62 314 aa11.05□□□□□ -0.64
RTCB-205ENST00000487704 TMOD3Q9NYL9 352 aa11.05□□□□□ -0.64
RTCB-205ENST00000487704 TSKSQ9UJT2 592 aa11.05□□□□□ -0.64
RTCB-205ENST00000487704 HABP4Q5JVS0 413 aaKnown RBP11.04□□□□□ -0.64
RTCB-205ENST00000487704 USHBP1Q8N6Y0 703 aa11.04□□□□□ -0.64
RTCB-205ENST00000487704 LTBP3Q9NS15 1303 aa11.04□□□□□ -0.64
RTCB-205ENST00000487704 KDRP35968 1356 aa11.03□□□□□ -0.64
RTCB-205ENST00000487704 DICER1Q9UPY3 1922 aaKnown RBP11.03□□□□□ -0.64
RTCB-205ENST00000487704 EDC4Q6P2E9 1401 aaKnown RBP11.03□□□□□ -0.64
RTCB-205ENST00000487704 SCN4AP35499 1836 aa11.03□□□□□ -0.64
RTCB-205ENST00000487704 SOX10P56693 466 aa11.03□□□□□ -0.64
RTCB-205ENST00000487704 SLC4A9Q96Q91 983 aa11.03□□□□□ -0.64
RTCB-205ENST00000487704 USP42Q9H9J4 1324 aaKnown RBP11.03□□□□□ -0.64
RTCB-205ENST00000487704 CASP8AP2Q9UKL3 1982 aa11.03□□□□□ -0.64
RTCB-205ENST00000487704 ZNF831Q5JPB2 1677 aa11.02□□□□□ -0.64
RTCB-205ENST00000487704 HDGFL2Q7Z4V5 671 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms