RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 PLVAPQ9BX97 442 aa8.05□□□□□ -1.12
USP9X-208ENST00000487625 NEURL1BA8MQ27 555 aa8.04□□□□□ -1.12
USP9X-208ENST00000487625 TAS1R3Q7RTX0 852 aa8.04□□□□□ -1.12
USP9X-208ENST00000487625 ABHD17AQ96GS6 310 aa8.04□□□□□ -1.12
USP9X-208ENST00000487625 ATXN7L1Q9ULK2 861 aaPredicted RBP8.04□□□□□ -1.12
USP9X-208ENST00000487625 ZC3H4Q9UPT8 1303 aaKnown RBP8.03□□□□□ -1.12
USP9X-208ENST00000487625 ARAFP10398 606 aa8.03□□□□□ -1.12
USP9X-208ENST00000487625 FGFR3P22607 806 aa8.03□□□□□ -1.12
USP9X-208ENST00000487625 PTK2Q05397 1052 aa8.03□□□□□ -1.12
USP9X-208ENST00000487625 TUSC1Q2TAM9 212 aa8.03□□□□□ -1.12
USP9X-208ENST00000487625 NDFIP2Q9NV92 336 aa8.03□□□□□ -1.12
USP9X-208ENST00000487625 NLRP3Q96P20 1036 aa8.01□□□□□ -1.13
USP9X-208ENST00000487625 GPSM3Q9Y4H4 160 aa8.01□□□□□ -1.13
USP9X-208ENST00000487625 TXKP42681 527 aa8□□□□□ -1.13
USP9X-208ENST00000487625 CTDSPL2Q05D32 466 aa8□□□□□ -1.13
USP9X-208ENST00000487625 FMNL2Q96PY5 1086 aa8□□□□□ -1.13
USP9X-208ENST00000487625 BNIP3LO60238 219 aa7.99□□□□□ -1.13
USP9X-208ENST00000487625 CLN3Q13286 438 aa7.99□□□□□ -1.13
USP9X-208ENST00000487625 LBRQ14739 615 aaKnown RBP7.99□□□□□ -1.13
USP9X-208ENST00000487625 MYSM1Q5VVJ2 828 aa7.99□□□□□ -1.13
USP9X-208ENST00000487625 PAX4O43316 350 aa7.98□□□□□ -1.13
USP9X-208ENST00000487625 PPP2R2DQ66LE6 453 aa7.98□□□□□ -1.13
USP9X-208ENST00000487625 DZIP3Q86Y13 1208 aaKnown RBP7.98□□□□□ -1.13
USP9X-208ENST00000487625 LRRN4Q8WUT4 740 aa7.98□□□□□ -1.13
USP9X-208ENST00000487625 KLF15Q9UIH9 416 aa7.98□□□□□ -1.13
USP9X-208ENST00000487625 NR6A1Q15406 480 aa7.97□□□□□ -1.13
USP9X-208ENST00000487625 SEPT12Q8IYM1 358 aa7.97□□□□□ -1.13
USP9X-208ENST00000487625 RUBCNLQ9H714 662 aa7.97□□□□□ -1.13
USP9X-208ENST00000487625 COL17A1Q9UMD9 1497 aaPredicted RBP7.97□□□□□ -1.13
USP9X-208ENST00000487625 A0A1B0GTH6 734 aa7.96□□□□□ -1.14
USP9X-208ENST00000487625 FCHSD1Q86WN1 690 aa7.96□□□□□ -1.14
USP9X-208ENST00000487625 PARP9Q8IXQ6 854 aa7.96□□□□□ -1.14
USP9X-208ENST00000487625 APBA3O96018 575 aa7.95□□□□□ -1.14
USP9X-208ENST00000487625 H2AFB1P0C5Y9 115 aa7.95□□□□□ -1.14
USP9X-208ENST00000487625 H2AFB2P0C5Z0 115 aa7.95□□□□□ -1.14
USP9X-208ENST00000487625 PHKA2P46019 1235 aa7.95□□□□□ -1.14
USP9X-208ENST00000487625 FZD5Q13467 585 aa7.95□□□□□ -1.14
USP9X-208ENST00000487625 ERVK-9P63128 1117 aa7.94□□□□□ -1.14
USP9X-208ENST00000487625 TULP1O00294 542 aaPredicted RBP7.92□□□□□ -1.14
USP9X-208ENST00000487625 CSB-PGBD3P0DP91 1061 aa7.92□□□□□ -1.14
USP9X-208ENST00000487625 ADH6P28332 368 aa7.92□□□□□ -1.14
USP9X-208ENST00000487625 PRRT3Q5FWE3 981 aa7.92□□□□□ -1.14
USP9X-208ENST00000487625 PGBD3Q8N328 593 aa7.92□□□□□ -1.14
USP9X-208ENST00000487625 TRIM52Q96A61 297 aa7.92□□□□□ -1.14
USP9X-208ENST00000487625 ARHGEF10LQ9HCE6 1279 aa7.92□□□□□ -1.14
USP9X-208ENST00000487625 FAM229AH3BQW9 127 aa7.91□□□□□ -1.14
USP9X-208ENST00000487625 MSX1P28360 303 aa7.91□□□□□ -1.14
USP9X-208ENST00000487625 EFHC2Q5JST6 749 aa7.91□□□□□ -1.14
USP9X-208ENST00000487625 CC2D2BQ6DHV5 1058 aa7.91□□□□□ -1.14
USP9X-208ENST00000487625 HCN2Q9UL51 889 aa7.91□□□□□ -1.14
USP9X-208ENST00000487625 SPDYE3A6NKU9 549 aa7.89□□□□□ -1.15
USP9X-208ENST00000487625 CYP2U1Q7Z449 544 aa7.89□□□□□ -1.15
USP9X-208ENST00000487625 ELNP15502 786 aa7.88□□□□□ -1.15
USP9X-208ENST00000487625 SCTRP47872 440 aa7.88□□□□□ -1.15
USP9X-208ENST00000487625 DNAAF2Q9NVR5 837 aaKnown RBP7.88□□□□□ -1.15
USP9X-208ENST00000487625 GIGYF1O75420 1035 aaPredicted RBP7.87□□□□□ -1.15
USP9X-208ENST00000487625 AVENQ9NQS1 362 aaPredicted RBP7.87□□□□□ -1.15
USP9X-208ENST00000487625 RAB6BQ9NRW1 208 aa7.87□□□□□ -1.15
USP9X-208ENST00000487625 CLK2P49760 499 aaKnown RBP7.86□□□□□ -1.15
USP9X-208ENST00000487625 CENPCQ03188 943 aa7.86□□□□□ -1.15
USP9X-208ENST00000487625 C4orf17Q53FE4 359 aa7.86□□□□□ -1.15
USP9X-208ENST00000487625 EPS8L1Q8TE68 723 aa7.86□□□□□ -1.15
USP9X-208ENST00000487625 NACC1Q96RE7 527 aa7.86□□□□□ -1.15
USP9X-208ENST00000487625 CRISPLD1Q9H336 500 aa7.86□□□□□ -1.15
USP9X-208ENST00000487625 TRAK2O60296 914 aa7.85□□□□□ -1.15
USP9X-208ENST00000487625 IL2RAP01589 272 aa7.85□□□□□ -1.15
USP9X-208ENST00000487625 LAMC2Q13753 1193 aa7.85□□□□□ -1.15
USP9X-208ENST00000487625 COL9A3Q14050 684 aaPredicted RBP7.85□□□□□ -1.15
USP9X-208ENST00000487625 GRIK4Q16099 956 aa7.85□□□□□ -1.15
USP9X-208ENST00000487625 BARGINQ6ZT62 677 aa7.85□□□□□ -1.15
USP9X-208ENST00000487625 OSBPL3Q9H4L5 887 aa7.85□□□□□ -1.15
USP9X-208ENST00000487625 CNKSR1Q969H4 720 aa7.84□□□□□ -1.15
USP9X-208ENST00000487625 ESYT1Q9BSJ8 1104 aa7.84□□□□□ -1.15
USP9X-208ENST00000487625 KRTAP17-1Q9BYP8 105 aa7.84□□□□□ -1.15
USP9X-208ENST00000487625 KRTAP4-11Q9BYQ6 195 aa7.84□□□□□ -1.15
USP9X-208ENST00000487625 HRH3Q9Y5N1 445 aa7.84□□□□□ -1.15
USP9X-208ENST00000487625 PCBP4P57723 403 aaKnown RBP7.83□□□□□ -1.16
USP9X-208ENST00000487625 ADGRE1Q14246 886 aa7.83□□□□□ -1.16
USP9X-208ENST00000487625 FAM182BQ5T319 152 aa7.83□□□□□ -1.16
USP9X-208ENST00000487625 ZSCAN10Q96SZ4 725 aaPredicted RBP7.83□□□□□ -1.16
USP9X-208ENST00000487625 ZCCHC2Q9C0B9 1178 aaKnown RBP7.83□□□□□ -1.16
USP9X-208ENST00000487625 RNF112Q9ULX5 631 aa7.83□□□□□ -1.16
USP9X-208ENST00000487625 PCDHGC4Q9Y5F7 938 aa7.83□□□□□ -1.16
USP9X-208ENST00000487625 CD33P20138 364 aa7.82□□□□□ -1.16
USP9X-208ENST00000487625 MBTPS1Q14703 1052 aa7.82□□□□□ -1.16
USP9X-208ENST00000487625 FHDC1Q9C0D6 1143 aaPredicted RBP7.82□□□□□ -1.16
USP9X-208ENST00000487625 GNASQ5JWF2 1037 aa7.81□□□□□ -1.16
USP9X-208ENST00000487625 ZNF468Q5VIY5 522 aaPredicted RBP7.81□□□□□ -1.16
USP9X-208ENST00000487625 FBXO31Q5XUX0 539 aaPredicted RBP7.81□□□□□ -1.16
USP9X-208ENST00000487625 FIGNL1Q6PIW4 674 aa7.81□□□□□ -1.16
USP9X-208ENST00000487625 MDFIQ99750 246 aa7.8□□□□□ -1.16
USP9X-208ENST00000487625 DCDC2BA2VCK2 349 aa7.79□□□□□ -1.16
USP9X-208ENST00000487625 MAPTP10636 758 aaKnown RBP7.79□□□□□ -1.16
USP9X-208ENST00000487625 TNP2Q05952 138 aa7.79□□□□□ -1.16
USP9X-208ENST00000487625 TRIM28Q13263 835 aaKnown RBP7.79□□□□□ -1.16
USP9X-208ENST00000487625 TXNRD3Q86VQ6 643 aa7.79□□□□□ -1.16
USP9X-208ENST00000487625 ELOA3CA0A087WX78 387 aaPredicted RBP7.78□□□□□ -1.16
USP9X-208ENST00000487625 ELOA3DA6NLF2 546 aaPredicted RBP7.78□□□□□ -1.16
USP9X-208ENST00000487625 ATXN7O15265 892 aaPredicted RBP7.78□□□□□ -1.16
USP9X-208ENST00000487625 ZMYND10O75800 440 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms