RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 ADAMTS2O95450 1211 aa10.17□□□□□ -0.78
CUL3-211ENST00000487558 BRD1O95696 1058 aa10.17□□□□□ -0.78
CUL3-211ENST00000487558 RHOQP17081 205 aa10.17□□□□□ -0.78
CUL3-211ENST00000487558 GPC1P35052 558 aa10.17□□□□□ -0.78
CUL3-211ENST00000487558 SRSF11Q05519 484 aaKnown RBP10.17□□□□□ -0.78
CUL3-211ENST00000487558 SLFNL1Q499Z3 407 aa10.17□□□□□ -0.78
CUL3-211ENST00000487558 A0A1W2PRU2 124 aa10.16□□□□□ -0.78
CUL3-211ENST00000487558 PIK3CDO00329 1044 aa10.16□□□□□ -0.78
CUL3-211ENST00000487558 KANK4Q5T7N3 995 aaPredicted RBP10.16□□□□□ -0.78
CUL3-211ENST00000487558 LOC100996750A0A140TA64 210 aa10.15□□□□□ -0.78
CUL3-211ENST00000487558 RNF20Q5VTR2 975 aa10.15□□□□□ -0.78
CUL3-211ENST00000487558 CC2D2BQ6DHV5 1058 aa10.15□□□□□ -0.78
CUL3-211ENST00000487558 LYPD4Q6UWN0 246 aa10.15□□□□□ -0.78
CUL3-211ENST00000487558 PLEKHM2Q8IWE5 1019 aa10.15□□□□□ -0.78
CUL3-211ENST00000487558 TRIM22Q8IYM9 498 aa10.15□□□□□ -0.78
CUL3-211ENST00000487558 GMCL1Q96IK5 515 aa10.15□□□□□ -0.78
CUL3-211ENST00000487558 KRTAP4-6Q9BYQ5 205 aa10.15□□□□□ -0.78
CUL3-211ENST00000487558 USP17L3A6NCW0 530 aa10.14□□□□□ -0.79
CUL3-211ENST00000487558 USP17L4A6NCW7 530 aa10.14□□□□□ -0.79
CUL3-211ENST00000487558 USP17L5A8MUK1 530 aa10.14□□□□□ -0.79
CUL3-211ENST00000487558 MEN1O00255 615 aa10.14□□□□□ -0.79
CUL3-211ENST00000487558 LZTS3O60299 673 aaPredicted RBP10.14□□□□□ -0.79
CUL3-211ENST00000487558 KCNA1Q09470 495 aa10.14□□□□□ -0.79
CUL3-211ENST00000487558 USP17L2Q6R6M4 530 aa10.14□□□□□ -0.79
CUL3-211ENST00000487558 USP17L1Q7RTZ2 530 aa10.14□□□□□ -0.79
CUL3-211ENST00000487558 ZNF837Q96EG3 531 aaPredicted RBP10.14□□□□□ -0.79
CUL3-211ENST00000487558 ELOAQ14241 798 aaKnown RBP10.13□□□□□ -0.79
CUL3-211ENST00000487558 DBN1Q16643 649 aa10.13□□□□□ -0.79
CUL3-211ENST00000487558 RNF135Q8IUD6 432 aa10.13□□□□□ -0.79
CUL3-211ENST00000487558 SCTRP47872 440 aa10.12□□□□□ -0.79
CUL3-211ENST00000487558 GRIP2Q9C0E4 1043 aa10.12□□□□□ -0.79
CUL3-211ENST00000487558 DYRK1BQ9Y463 629 aa10.12□□□□□ -0.79
CUL3-211ENST00000487558 CELA2BP08218 269 aaPredicted RBP10.11□□□□□ -0.79
CUL3-211ENST00000487558 IRS1P35568 1242 aa10.11□□□□□ -0.79
CUL3-211ENST00000487558 POU4F2Q12837 409 aa10.11□□□□□ -0.79
CUL3-211ENST00000487558 CLN3Q13286 438 aa10.11□□□□□ -0.79
CUL3-211ENST00000487558 SUZ12Q15022 739 aaKnown RBP10.11□□□□□ -0.79
CUL3-211ENST00000487558 MAP7D1Q3KQU3 841 aa10.11□□□□□ -0.79
CUL3-211ENST00000487558 PHTF2Q8N3S3 785 aa10.11□□□□□ -0.79
CUL3-211ENST00000487558 GZF1Q9H116 711 aaPredicted RBP10.11□□□□□ -0.79
CUL3-211ENST00000487558 TMEM88BA6NKF7 163 aa10.1□□□□□ -0.79
CUL3-211ENST00000487558 MARSP56192 900 aaKnown RBP10.1□□□□□ -0.79
CUL3-211ENST00000487558 CYP2U1Q7Z449 544 aa10.1□□□□□ -0.79
CUL3-211ENST00000487558 OSBPL3Q9H4L5 887 aa10.1□□□□□ -0.79
CUL3-211ENST00000487558 MKRN1Q9UHC7 482 aaKnown RBP10.1□□□□□ -0.79
CUL3-211ENST00000487558 NBPF10Q6P3W6 841 aaKnown RBP10.09□□□□□ -0.79
CUL3-211ENST00000487558 LARP1Q6PKG0 1096 aaKnown RBP10.09□□□□□ -0.79
CUL3-211ENST00000487558 RIPOR1Q6ZS17 1223 aa10.09□□□□□ -0.79
CUL3-211ENST00000487558 DEPDC4Q8N2C3 294 aa10.09□□□□□ -0.79
CUL3-211ENST00000487558 NBPF15Q8N660 670 aa10.09□□□□□ -0.79
CUL3-211ENST00000487558 PLPP7Q8NBV4 271 aa10.09□□□□□ -0.79
CUL3-211ENST00000487558 NLRP3Q96P20 1036 aa10.09□□□□□ -0.79
CUL3-211ENST00000487558 MBIPQ9NS73 344 aa10.09□□□□□ -0.79
CUL3-211ENST00000487558 PCDHB11Q9Y5F2 797 aa10.09□□□□□ -0.79
CUL3-211ENST00000487558 CARNS1A5YM72 827 aa10.08□□□□□ -0.8
CUL3-211ENST00000487558 SPATA31C2B4DYI2 1134 aa10.08□□□□□ -0.8
CUL3-211ENST00000487558 GPR25O00155 361 aa10.08□□□□□ -0.8
CUL3-211ENST00000487558 NCOA4Q13772 614 aa10.08□□□□□ -0.8
CUL3-211ENST00000487558 WDR44Q5JSH3 913 aa10.08□□□□□ -0.8
CUL3-211ENST00000487558 SLC27A3Q5K4L6 730 aa10.08□□□□□ -0.8
CUL3-211ENST00000487558 TMCO4Q5TGY1 634 aa10.08□□□□□ -0.8
CUL3-211ENST00000487558 B4GALNT3Q6L9W6 998 aa10.08□□□□□ -0.8
CUL3-211ENST00000487558 KANK3Q6NY19 840 aa10.08□□□□□ -0.8
CUL3-211ENST00000487558 FOXR1Q6PIV2 292 aa10.08□□□□□ -0.8
CUL3-211ENST00000487558 SCARF2Q96GP6 870 aaPredicted RBP10.08□□□□□ -0.8
CUL3-211ENST00000487558 NOVA2Q9UNW9 492 aaKnown RBP10.08□□□□□ -0.8
CUL3-211ENST00000487558 FAM196BA6NMK8 535 aa10.07□□□□□ -0.8
CUL3-211ENST00000487558 MAP3K10Q02779 954 aa10.07□□□□□ -0.8
CUL3-211ENST00000487558 EML3Q32P44 896 aa10.07□□□□□ -0.8
CUL3-211ENST00000487558 DNMT3AQ9Y6K1 912 aaPredicted RBP10.07□□□□□ -0.8
CUL3-211ENST00000487558 RASA1P20936 1047 aa10.06□□□□□ -0.8
CUL3-211ENST00000487558 GTPBP3Q969Y2 492 aaKnown RBP10.06□□□□□ -0.8
CUL3-211ENST00000487558 CHIC2Q9UKJ5 165 aa10.06□□□□□ -0.8
CUL3-211ENST00000487558 IGF1RP08069 1367 aa10.05□□□□□ -0.8
CUL3-211ENST00000487558 H7C1W4 665 aa10.05□□□□□ -0.8
CUL3-211ENST00000487558 TRIM50Q86XT4 487 aa10.05□□□□□ -0.8
CUL3-211ENST00000487558 GAS2L1Q99501 681 aaPredicted RBP10.05□□□□□ -0.8
CUL3-211ENST00000487558 ARHGEF10LQ9HCE6 1279 aa10.05□□□□□ -0.8
CUL3-211ENST00000487558 USP17L15C9J2P7 530 aa10.04□□□□□ -0.8
CUL3-211ENST00000487558 USP17L10C9JJH3 530 aa10.04□□□□□ -0.8
CUL3-211ENST00000487558 USP17L13C9JLJ4 530 aa10.04□□□□□ -0.8
CUL3-211ENST00000487558 USP17L12C9JPN9 530 aa10.04□□□□□ -0.8
CUL3-211ENST00000487558 USP17L11C9JVI0 530 aa10.04□□□□□ -0.8
CUL3-211ENST00000487558 USP17L21D6R901 530 aa10.04□□□□□ -0.8
CUL3-211ENST00000487558 USP17L18D6R9N7 530 aa10.04□□□□□ -0.8
CUL3-211ENST00000487558 USP17L22D6RA61 530 aa10.04□□□□□ -0.8
CUL3-211ENST00000487558 USP17L17D6RBQ6 530 aa10.04□□□□□ -0.8
CUL3-211ENST00000487558 USP17L19D6RCP7 530 aa10.04□□□□□ -0.8
CUL3-211ENST00000487558 USP17L20D6RJB6 530 aa10.04□□□□□ -0.8
CUL3-211ENST00000487558 USP17L24Q0WX57 530 aa10.04□□□□□ -0.8
CUL3-211ENST00000487558 FAM200AQ8TCP9 573 aa10.04□□□□□ -0.8
CUL3-211ENST00000487558 ZMIZ1Q9ULJ6 1067 aa10.04□□□□□ -0.8
CUL3-211ENST00000487558 GNRH1P01148 92 aa10.03□□□□□ -0.8
CUL3-211ENST00000487558 RANGAP1P46060 587 aaPredicted RBP10.03□□□□□ -0.8
CUL3-211ENST00000487558 ATP1A2P50993 1020 aa10.03□□□□□ -0.8
CUL3-211ENST00000487558 PTK7Q13308 1070 aa10.03□□□□□ -0.8
CUL3-211ENST00000487558 CRTC2Q53ET0 693 aaPredicted RBP10.03□□□□□ -0.8
CUL3-211ENST00000487558 TMEM164Q5U3C3 297 aa10.03□□□□□ -0.8
CUL3-211ENST00000487558 CDCA7Q9BWT1 371 aaPredicted RBP10.03□□□□□ -0.8
CUL3-211ENST00000487558 TIMMDC1Q9NPL8 285 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms