RNA–Protein interactions for RNA: ENST00000487431.1

RPL35-203, Transcript of ribosomal protein L35, humanhuman

TSL 1 (best)

Gene RPL35, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-203ENST00000487431 DCAF5Q96JK2 942 aa29.32■■■□□ 2.28
RPL35-203ENST00000487431 KDM6AO15550 1401 aaPredicted RBP29.31■■■□□ 2.28
RPL35-203ENST00000487431 YBX3P16989 372 aaKnown RBP eCLIP29.31■■■□□ 2.285e-39■■□□□ 12.3
RPL35-203ENST00000487431 PLEKHO1Q53GL0 409 aaPredicted RBP29.31■■■□□ 2.28
RPL35-203ENST00000487431 ATP6V1AP38606 617 aa29.3■■■□□ 2.28
RPL35-203ENST00000487431 AMOTQ4VCS5 1084 aa29.3■■■□□ 2.28
RPL35-203ENST00000487431 PELP1Q8IZL8 1130 aaKnown RBP29.3■■■□□ 2.28
RPL35-203ENST00000487431 KNSTRNQ9Y448 316 aa29.3■■■□□ 2.28
RPL35-203ENST00000487431 SCN11AQ9UI33 1791 aa29.3■■■□□ 2.28
RPL35-203ENST00000487431 GRIN3BO60391 1043 aa29.29■■■□□ 2.28
RPL35-203ENST00000487431 PHF14O94880 888 aa29.29■■■□□ 2.28
RPL35-203ENST00000487431 SMIM5Q71RC9 77 aa29.29■■■□□ 2.28
RPL35-203ENST00000487431 KIF13BQ9NQT8 1826 aa29.28■■■□□ 2.28
RPL35-203ENST00000487431 CICQ96RK0 1608 aaPredicted RBP29.27■■■□□ 2.28
RPL35-203ENST00000487431 VIRMAQ69YN4 1812 aaKnown RBP29.27■■■□□ 2.28
RPL35-203ENST00000487431 AMER1Q5JTC6 1135 aaPredicted RBP29.27■■■□□ 2.28
RPL35-203ENST00000487431 GNPATO15228 680 aa29.26■■■□□ 2.27
RPL35-203ENST00000487431 ZNF530Q6P9A1 599 aaPredicted RBP29.26■■■□□ 2.27
RPL35-203ENST00000487431 AEBP1Q8IUX7 1158 aa29.26■■■□□ 2.27
RPL35-203ENST00000487431 MYH14Q7Z406 1995 aaKnown RBP29.26■■■□□ 2.27
RPL35-203ENST00000487431 SLC4A9Q96Q91 983 aa29.25■■■□□ 2.27
RPL35-203ENST00000487431 KIF7Q2M1P5 1343 aa29.24■■■□□ 2.27
RPL35-203ENST00000487431 IL13P35225 146 aa29.24■■■□□ 2.27
RPL35-203ENST00000487431 C4AP0C0L4 1744 aa29.23■■■□□ 2.27
RPL35-203ENST00000487431 KIAA1551Q9HCM1 1747 aa29.21■■■□□ 2.27
RPL35-203ENST00000487431 RC3H1Q5TC82 1133 aaKnown RBP29.21■■■□□ 2.27
RPL35-203ENST00000487431 SULT6B1Q6IMI4 303 aa29.21■■■□□ 2.27
RPL35-203ENST00000487431 TJP1Q07157 1748 aa29.2■■■□□ 2.27
RPL35-203ENST00000487431 CNTNAP4Q9C0A0 1308 aa29.2■■■□□ 2.26
RPL35-203ENST00000487431 MTHFSP49914 203 aa29.19■■■□□ 2.26
RPL35-203ENST00000487431 CABP4P57796 275 aa29.19■■■□□ 2.26
RPL35-203ENST00000487431 C1orf141Q5JVX7 400 aa29.19■■■□□ 2.26
RPL35-203ENST00000487431 RBM42Q9BTD8 480 aaKnown RBP29.18■■■□□ 2.26
RPL35-203ENST00000487431 PER1O15534 1290 aaPredicted RBP29.17■■■□□ 2.26
RPL35-203ENST00000487431 ADRA2BP18089 450 aa29.17■■■□□ 2.26
RPL35-203ENST00000487431 RTCBQ9Y3I0 505 aaKnown RBP29.17■■■□□ 2.26
RPL35-203ENST00000487431 ADAMTS7Q9UKP4 1686 aa29.15■■■□□ 2.26
RPL35-203ENST00000487431 C1QTNF8P60827 252 aa29.15■■■□□ 2.26
RPL35-203ENST00000487431 TRAPPC3LQ5T215 181 aa29.15■■■□□ 2.26
RPL35-203ENST00000487431 MRC1P22897 1456 aa29.13■■■□□ 2.25
RPL35-203ENST00000487431 NFATC2IPQ8NCF5 419 aa29.13■■■□□ 2.25
RPL35-203ENST00000487431 N4BP2Q86UW6 1770 aaPredicted RBP29.13■■■□□ 2.25
RPL35-203ENST00000487431 RPS6KA4O75676 772 aa29.12■■■□□ 2.25
RPL35-203ENST00000487431 BRCA1P38398 1863 aaKnown RBP29.11■■■□□ 2.25
RPL35-203ENST00000487431 MMP10P09238 476 aa29.11■■■□□ 2.25
RPL35-203ENST00000487431 AKAP4Q5JQC9 854 aa29.11■■■□□ 2.25
RPL35-203ENST00000487431 NLGN1Q8N2Q7 840 aa29.11■■■□□ 2.25
RPL35-203ENST00000487431 ARHGEF1Q92888 912 aaKnown RBP29.11■■■□□ 2.25
RPL35-203ENST00000487431 ADCY9O60503 1353 aa29.1■■■□□ 2.25
RPL35-203ENST00000487431 GIGYF1O75420 1035 aaPredicted RBP29.08■■■□□ 2.25
RPL35-203ENST00000487431 NPC1L1Q9UHC9 1359 aa29.08■■■□□ 2.25
RPL35-203ENST00000487431 C10orf71Q711Q0 1435 aa29.08■■■□□ 2.25
RPL35-203ENST00000487431 PXDNLA1KZ92 1463 aa29.08■■■□□ 2.25
RPL35-203ENST00000487431 PTCD1O75127 700 aaKnown RBP29.07■■■□□ 2.24
RPL35-203ENST00000487431 GYS1P13807 737 aa29.07■■■□□ 2.24
RPL35-203ENST00000487431 ATP10DQ9P241 1426 aa29.07■■■□□ 2.24
RPL35-203ENST00000487431 RFC4P35249 363 aa29.05■■■□□ 2.24
RPL35-203ENST00000487431 UBR2Q8IWV8 1755 aa29.05■■■□□ 2.24
RPL35-203ENST00000487431 COL3A1P02461 1466 aaPredicted RBP29.04■■■□□ 2.24
RPL35-203ENST00000487431 CRKLP46109 303 aaKnown RBP29.04■■■□□ 2.24
RPL35-203ENST00000487431 SLC52A2Q9HAB3 445 aa29.04■■■□□ 2.24
RPL35-203ENST00000487431 TGFB2P61812 414 aa29.03■■■□□ 2.24
RPL35-203ENST00000487431 CC2D1BQ5T0F9 858 aaKnown RBP29.03■■■□□ 2.24
RPL35-203ENST00000487431 DIAPH1O60610 1272 aaKnown RBP29.02■■■□□ 2.24
RPL35-203ENST00000487431 HMOX1P09601 288 aa29.02■■■□□ 2.24
RPL35-203ENST00000487431 LGR6Q9HBX8 967 aa29.02■■■□□ 2.24
RPL35-203ENST00000487431 KCPQ6ZWJ8 1503 aa29.01■■■□□ 2.23
RPL35-203ENST00000487431 ARFGEF1Q9Y6D6 1849 aa29.01■■■□□ 2.23
RPL35-203ENST00000487431 RNMTO43148 476 aaKnown RBP29■■■□□ 2.23
RPL35-203ENST00000487431 INTS5Q6P9B9 1019 aaKnown RBP28.99■■■□□ 2.23
RPL35-203ENST00000487431 WWC3Q9ULE0 1092 aa28.99■■■□□ 2.23
RPL35-203ENST00000487431 SIPA1L3O60292 1781 aaPredicted RBP28.98■■■□□ 2.23
RPL35-203ENST00000487431 USP42Q9H9J4 1324 aaKnown RBP28.98■■■□□ 2.23
RPL35-203ENST00000487431 SENP3-EIF4A1A0A087X0R7 540 aa28.98■■■□□ 2.23
RPL35-203ENST00000487431 MTHFSDQ2M296 383 aaKnown RBP28.98■■■□□ 2.23
RPL35-203ENST00000487431 CCDC87Q9NVE4 849 aa28.98■■■□□ 2.23
RPL35-203ENST00000487431 PARP3Q9Y6F1 533 aa28.97■■■□□ 2.23
RPL35-203ENST00000487431 DNAJC10Q8IXB1 793 aa28.94■■■□□ 2.22
RPL35-203ENST00000487431 SRP68Q9UHB9 627 aaKnown RBP28.94■■■□□ 2.22
RPL35-203ENST00000487431 AFDNP55196 1824 aaKnown RBP28.93■■■□□ 2.22
RPL35-203ENST00000487431 A0A0G2JLW4 131 aa28.93■■■□□ 2.22
RPL35-203ENST00000487431 FKBP8Q14318 412 aa28.93■■■□□ 2.22
RPL35-203ENST00000487431 GPBP1L1Q9HC44 474 aaPredicted RBP28.93■■■□□ 2.22
RPL35-203ENST00000487431 CYP19A1P11511 503 aaPredicted RBP28.92■■■□□ 2.22
RPL35-203ENST00000487431 SLC39A6Q13433 755 aa28.92■■■□□ 2.22
RPL35-203ENST00000487431 SOS1Q07889 1333 aaPredicted RBP28.92■■■□□ 2.22
RPL35-203ENST00000487431 NRXN2Q9P2S2 1712 aa28.91■■■□□ 2.22
RPL35-203ENST00000487431 DPEP1P16444 411 aa28.91■■■□□ 2.22
RPL35-203ENST00000487431 VSIG10Q8N0Z9 540 aa28.91■■■□□ 2.22
RPL35-203ENST00000487431 DDR1Q08345 913 aa28.9■■■□□ 2.22
RPL35-203ENST00000487431 KCNA3P22001 575 aa28.89■■■□□ 2.22
RPL35-203ENST00000487431 TM4SF1P30408 202 aa28.88■■■□□ 2.21
RPL35-203ENST00000487431 BCS1LQ9Y276 419 aa28.88■■■□□ 2.21
RPL35-203ENST00000487431 CEP350Q5VT06 3117 aa28.86■■■□□ 2.21
RPL35-203ENST00000487431 COL15A1P39059 1388 aa28.86■■■□□ 2.21
RPL35-203ENST00000487431 DLEC1Q9Y238 1755 aa28.85■■■□□ 2.21
RPL35-203ENST00000487431 POLRMTO00411 1230 aaKnown RBP28.85■■■□□ 2.21
RPL35-203ENST00000487431 ZPR1O75312 459 aa28.84■■■□□ 2.21
RPL35-203ENST00000487431 USPL1Q5W0Q7 1092 aa28.84■■■□□ 2.21
RPL35-203ENST00000487431 GAS2L2Q8NHY3 880 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms