RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 COL23A1Q86Y22 540 aaPredicted RBP16.8■□□□□ 0.28
ITSN1-229ENST00000487427 HMOX1P09601 288 aa16.79■□□□□ 0.28
ITSN1-229ENST00000487427 POLD1P28340 1107 aa16.79■□□□□ 0.28
ITSN1-229ENST00000487427 FHDC1Q9C0D6 1143 aaPredicted RBP16.79■□□□□ 0.28
ITSN1-229ENST00000487427 ATP6V1AP38606 617 aa16.78■□□□□ 0.28
ITSN1-229ENST00000487427 AK7Q96M32 723 aa16.78■□□□□ 0.28
ITSN1-229ENST00000487427 SYT17Q9BSW7 474 aa16.78■□□□□ 0.28
ITSN1-229ENST00000487427 TOGARAM1Q9Y4F4 1720 aa16.78■□□□□ 0.28
ITSN1-229ENST00000487427 AKAP4Q5JQC9 854 aa16.77■□□□□ 0.28
ITSN1-229ENST00000487427 ITPK1Q13572 414 aa16.76■□□□□ 0.27
ITSN1-229ENST00000487427 NFATC2IPQ8NCF5 419 aa16.76■□□□□ 0.27
ITSN1-229ENST00000487427 LINC00116Q8NCU8 138 aa16.76■□□□□ 0.27
ITSN1-229ENST00000487427 CFAP53Q96M91 514 aa16.76■□□□□ 0.27
ITSN1-229ENST00000487427 KDM6AO15550 1401 aaPredicted RBP16.76■□□□□ 0.27
ITSN1-229ENST00000487427 U2SURPO15042 1029 aaKnown RBP16.75■□□□□ 0.27
ITSN1-229ENST00000487427 RBM42Q9BTD8 480 aaKnown RBP16.75■□□□□ 0.27
ITSN1-229ENST00000487427 ITGB4P16144 1822 aa16.75■□□□□ 0.27
ITSN1-229ENST00000487427 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.73■□□□□ 0.27
ITSN1-229ENST00000487427 SSFA2P28290 1259 aa16.73■□□□□ 0.27
ITSN1-229ENST00000487427 PPP2R1AP30153 589 aa16.73■□□□□ 0.27
ITSN1-229ENST00000487427 MTHFSDQ2M296 383 aaKnown RBP16.73■□□□□ 0.27
ITSN1-229ENST00000487427 SLC4A9Q96Q91 983 aa16.73■□□□□ 0.27
ITSN1-229ENST00000487427 LGR6Q9HBX8 967 aa16.73■□□□□ 0.27
ITSN1-229ENST00000487427 MAP3K5Q99683 1374 aa16.73■□□□□ 0.27
ITSN1-229ENST00000487427 AMIGO3Q86WK7 504 aa16.72■□□□□ 0.27
ITSN1-229ENST00000487427 NUDCQ9Y266 331 aa16.72■□□□□ 0.27
ITSN1-229ENST00000487427 QSER1Q2KHR3 1735 aa16.72■□□□□ 0.27
ITSN1-229ENST00000487427 GNPATO15228 680 aa16.71■□□□□ 0.27
ITSN1-229ENST00000487427 RNMTO43148 476 aaKnown RBP16.71■□□□□ 0.27
ITSN1-229ENST00000487427 PTCD1O75127 700 aaKnown RBP16.71■□□□□ 0.27
ITSN1-229ENST00000487427 PHF14O94880 888 aa16.71■□□□□ 0.27
ITSN1-229ENST00000487427 RC3H1Q5TC82 1133 aaKnown RBP16.71■□□□□ 0.27
ITSN1-229ENST00000487427 MSL1Q68DK7 614 aa16.71■□□□□ 0.27
ITSN1-229ENST00000487427 SLC52A2Q9HAB3 445 aa16.71■□□□□ 0.27
ITSN1-229ENST00000487427 COL3A1P02461 1466 aaPredicted RBP16.71■□□□□ 0.27
ITSN1-229ENST00000487427 SMIM5Q71RC9 77 aa16.7■□□□□ 0.26
ITSN1-229ENST00000487427 C5P01031 1676 aa16.69■□□□□ 0.26
ITSN1-229ENST00000487427 RTCBQ9Y3I0 505 aaKnown RBP16.69■□□□□ 0.26
ITSN1-229ENST00000487427 C4BP0C0L5 1744 aa16.69■□□□□ 0.26
ITSN1-229ENST00000487427 TRAPPC3LQ5T215 181 aa16.68■□□□□ 0.26
ITSN1-229ENST00000487427 KLHL34Q8N239 644 aa16.68■□□□□ 0.26
ITSN1-229ENST00000487427 GAS2L2Q8NHY3 880 aa16.68■□□□□ 0.26
ITSN1-229ENST00000487427 RPS6KA4O75676 772 aa16.67■□□□□ 0.26
ITSN1-229ENST00000487427 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
ITSN1-229ENST00000487427 CNTNAP4Q9C0A0 1308 aa16.67■□□□□ 0.26
ITSN1-229ENST00000487427 TAF1LQ8IZX4 1826 aa16.66■□□□□ 0.26
ITSN1-229ENST00000487427 TUBGCP6Q96RT7 1819 aa16.66■□□□□ 0.26
ITSN1-229ENST00000487427 GNAT3A8MTJ3 354 aa16.66■□□□□ 0.26
ITSN1-229ENST00000487427 U2AF1L5P0DN76 240 aaPredicted RBP16.66■□□□□ 0.26
ITSN1-229ENST00000487427 PRKAR2BP31323 418 aa16.66■□□□□ 0.26
ITSN1-229ENST00000487427 U2AF1Q01081 240 aaKnown RBP eCLIP16.66■□□□□ 0.26
ITSN1-229ENST00000487427 RSPH6AQ9H0K4 717 aa16.66■□□□□ 0.26
ITSN1-229ENST00000487427 FCHSD2O94868 740 aa16.65■□□□□ 0.26
ITSN1-229ENST00000487427 YY1P25490 414 aa16.65■□□□□ 0.26
ITSN1-229ENST00000487427 PHACTR3Q96KR7 559 aa16.65■□□□□ 0.26
ITSN1-229ENST00000487427 CRKLP46109 303 aaKnown RBP16.64■□□□□ 0.25
ITSN1-229ENST00000487427 SLC39A6Q13433 755 aa16.64■□□□□ 0.25
ITSN1-229ENST00000487427 IL17REQ8NFR9 667 aa16.64■□□□□ 0.25
ITSN1-229ENST00000487427 ARHGEF1Q92888 912 aaKnown RBP16.64■□□□□ 0.25
ITSN1-229ENST00000487427 CD2APQ9Y5K6 639 aa16.64■□□□□ 0.25
ITSN1-229ENST00000487427 COL24A1Q17RW2 1714 aa16.64■□□□□ 0.25
ITSN1-229ENST00000487427 GPR162Q16538 588 aa16.63■□□□□ 0.25
ITSN1-229ENST00000487427 NLGN1Q8N2Q7 840 aa16.63■□□□□ 0.25
ITSN1-229ENST00000487427 NLGN2Q8NFZ4 835 aa16.63■□□□□ 0.25
ITSN1-229ENST00000487427 RFC4P35249 363 aa16.62■□□□□ 0.25
ITSN1-229ENST00000487427 TEFQ10587 303 aa16.62■□□□□ 0.25
ITSN1-229ENST00000487427 ZNF831Q5JPB2 1677 aa16.62■□□□□ 0.25
ITSN1-229ENST00000487427 INTS5Q6P9B9 1019 aaKnown RBP16.61■□□□□ 0.25
ITSN1-229ENST00000487427 DNAJC10Q8IXB1 793 aa16.61■□□□□ 0.25
ITSN1-229ENST00000487427 VSIG10Q8N0Z9 540 aa16.61■□□□□ 0.25
ITSN1-229ENST00000487427 MRC1P22897 1456 aa16.61■□□□□ 0.25
ITSN1-229ENST00000487427 DDX10Q13206 875 aaKnown RBP16.6■□□□□ 0.25
ITSN1-229ENST00000487427 TTC5Q8N0Z6 440 aa16.6■□□□□ 0.25
ITSN1-229ENST00000487427 UBR3Q6ZT12 1888 aa16.6■□□□□ 0.25
ITSN1-229ENST00000487427 SCN11AQ9UI33 1791 aa16.59■□□□□ 0.25
ITSN1-229ENST00000487427 MMP10P09238 476 aa16.59■□□□□ 0.25
ITSN1-229ENST00000487427 CYP19A1P11511 503 aaPredicted RBP16.59■□□□□ 0.25
ITSN1-229ENST00000487427 RALBP1Q15311 655 aa16.59■□□□□ 0.25
ITSN1-229ENST00000487427 CCDC87Q9NVE4 849 aa16.59■□□□□ 0.25
ITSN1-229ENST00000487427 GYS1P13807 737 aa16.58■□□□□ 0.24
ITSN1-229ENST00000487427 ZNF790Q6PG37 636 aa16.58■□□□□ 0.24
ITSN1-229ENST00000487427 PELP1Q8IZL8 1130 aaKnown RBP16.58■□□□□ 0.24
ITSN1-229ENST00000487427 CEMIPQ8WUJ3 1361 aa16.58■□□□□ 0.24
ITSN1-229ENST00000487427 HTATSF1O43719 755 aaKnown RBP16.57■□□□□ 0.24
ITSN1-229ENST00000487427 RTF1Q92541 710 aaKnown RBP16.57■□□□□ 0.24
ITSN1-229ENST00000487427 U3KPZ7 1027 aaPredicted RBP16.57■□□□□ 0.24
ITSN1-229ENST00000487427 GRIN3BO60391 1043 aa16.56■□□□□ 0.24
ITSN1-229ENST00000487427 STARD3NLO95772 234 aa16.56■□□□□ 0.24
ITSN1-229ENST00000487427 NEFMP07197 916 aa16.56■□□□□ 0.24
ITSN1-229ENST00000487427 ZNF496Q96IT1 587 aaPredicted RBP16.56■□□□□ 0.24
ITSN1-229ENST00000487427 TEX13AQ9BXU3 409 aaPredicted RBP16.56■□□□□ 0.24
ITSN1-229ENST00000487427 ADAMTS7Q9UKP4 1686 aa16.56■□□□□ 0.24
ITSN1-229ENST00000487427 SOS1Q07889 1333 aaPredicted RBP16.54■□□□□ 0.24
ITSN1-229ENST00000487427 USP42Q9H9J4 1324 aaKnown RBP16.54■□□□□ 0.24
ITSN1-229ENST00000487427 BTBD11A6QL63 1104 aa16.54■□□□□ 0.24
ITSN1-229ENST00000487427 YBX3P16989 372 aaKnown RBP eCLIP16.54■□□□□ 0.24
ITSN1-229ENST00000487427 PNNQ9H307 717 aaKnown RBP16.54■□□□□ 0.24
ITSN1-229ENST00000487427 SRP68Q9UHB9 627 aaKnown RBP16.54■□□□□ 0.24
ITSN1-229ENST00000487427 PARP3Q9Y6F1 533 aa16.54■□□□□ 0.24
ITSN1-229ENST00000487427 KCPQ6ZWJ8 1503 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 847.1 ms