RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 ANKRD26Q9UPS8 1709 aa16.87■□□□□ 0.29
SREBF1-215ENST00000487401 AMIGO3Q86WK7 504 aa16.86■□□□□ 0.29
SREBF1-215ENST00000487401 LY75O60449 1722 aa16.85■□□□□ 0.29
SREBF1-215ENST00000487401 PKD1L3Q7Z443 1732 aa16.85■□□□□ 0.29
SREBF1-215ENST00000487401 CD2APQ9Y5K6 639 aa16.85■□□□□ 0.29
SREBF1-215ENST00000487401 DIAPH1O60610 1272 aaKnown RBP16.84■□□□□ 0.29
SREBF1-215ENST00000487401 NFATC2IPQ8NCF5 419 aa16.84■□□□□ 0.29
SREBF1-215ENST00000487401 RTCBQ9Y3I0 505 aaKnown RBP16.84■□□□□ 0.29
SREBF1-215ENST00000487401 GRIN3BO60391 1043 aa16.83■□□□□ 0.28
SREBF1-215ENST00000487401 HMOX1P09601 288 aa16.83■□□□□ 0.28
SREBF1-215ENST00000487401 KDRP35968 1356 aa16.83■□□□□ 0.28
SREBF1-215ENST00000487401 AKAP4Q5JQC9 854 aa16.83■□□□□ 0.28
SREBF1-215ENST00000487401 TRAPPC3LQ5T215 181 aa16.83■□□□□ 0.28
SREBF1-215ENST00000487401 MAP2P11137 1827 aaKnown RBP16.82■□□□□ 0.28
SREBF1-215ENST00000487401 PTCD1O75127 700 aaKnown RBP16.82■□□□□ 0.28
SREBF1-215ENST00000487401 RC3H1Q5TC82 1133 aaKnown RBP16.82■□□□□ 0.28
SREBF1-215ENST00000487401 ZNF784Q8NCA9 323 aaPredicted RBP16.82■□□□□ 0.28
SREBF1-215ENST00000487401 SLC4A9Q96Q91 983 aa16.82■□□□□ 0.28
SREBF1-215ENST00000487401 KDM6AO15550 1401 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-215ENST00000487401 TOGARAM1Q9Y4F4 1720 aa16.81■□□□□ 0.28
SREBF1-215ENST00000487401 QSER1Q2KHR3 1735 aa16.79■□□□□ 0.28
SREBF1-215ENST00000487401 YBX3P16989 372 aaKnown RBP eCLIP16.79■□□□□ 0.28
SREBF1-215ENST00000487401 ADRA2BP18089 450 aa16.79■□□□□ 0.28
SREBF1-215ENST00000487401 UTRNP46939 3433 aa16.79■□□□□ 0.28
SREBF1-215ENST00000487401 NPC1L1Q9UHC9 1359 aa16.78■□□□□ 0.28
SREBF1-215ENST00000487401 CNTNAP4Q9C0A0 1308 aa16.78■□□□□ 0.28
SREBF1-215ENST00000487401 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
SREBF1-215ENST00000487401 RPS6KA4O75676 772 aa16.78■□□□□ 0.28
SREBF1-215ENST00000487401 RFC4P35249 363 aa16.78■□□□□ 0.28
SREBF1-215ENST00000487401 NLGN1Q8N2Q7 840 aa16.78■□□□□ 0.28
SREBF1-215ENST00000487401 ARHGEF1Q92888 912 aaKnown RBP16.78■□□□□ 0.28
SREBF1-215ENST00000487401 LGR6Q9HBX8 967 aa16.78■□□□□ 0.28
SREBF1-215ENST00000487401 C4BP0C0L5 1744 aa16.78■□□□□ 0.28
SREBF1-215ENST00000487401 RNMTO43148 476 aaKnown RBP16.77■□□□□ 0.28
SREBF1-215ENST00000487401 MMP10P09238 476 aa16.77■□□□□ 0.28
SREBF1-215ENST00000487401 MTHFSDQ2M296 383 aaKnown RBP16.77■□□□□ 0.28
SREBF1-215ENST00000487401 SLC52A2Q9HAB3 445 aa16.77■□□□□ 0.28
SREBF1-215ENST00000487401 C5P01031 1676 aa16.77■□□□□ 0.28
SREBF1-215ENST00000487401 CRKLP46109 303 aaKnown RBP16.75■□□□□ 0.27
SREBF1-215ENST00000487401 CFAP53Q96M91 514 aa16.75■□□□□ 0.27
SREBF1-215ENST00000487401 TUBGCP6Q96RT7 1819 aa16.73■□□□□ 0.27
SREBF1-215ENST00000487401 GYS1P13807 737 aa16.72■□□□□ 0.27
SREBF1-215ENST00000487401 SLC39A6Q13433 755 aa16.72■□□□□ 0.27
SREBF1-215ENST00000487401 DNAJC10Q8IXB1 793 aa16.72■□□□□ 0.27
SREBF1-215ENST00000487401 GAS2L2Q8NHY3 880 aa16.72■□□□□ 0.27
SREBF1-215ENST00000487401 WWC3Q9ULE0 1092 aa16.72■□□□□ 0.27
SREBF1-215ENST00000487401 PARP3Q9Y6F1 533 aa16.72■□□□□ 0.27
SREBF1-215ENST00000487401 ITGB4P16144 1822 aa16.72■□□□□ 0.27
SREBF1-215ENST00000487401 COL24A1Q17RW2 1714 aa16.71■□□□□ 0.27
SREBF1-215ENST00000487401 CCDC87Q9NVE4 849 aa16.71■□□□□ 0.27
SREBF1-215ENST00000487401 NUDCQ9Y266 331 aa16.71■□□□□ 0.27
SREBF1-215ENST00000487401 TGFB2P61812 414 aa16.7■□□□□ 0.26
SREBF1-215ENST00000487401 INTS5Q6P9B9 1019 aaKnown RBP16.7■□□□□ 0.26
SREBF1-215ENST00000487401 GNAT3A8MTJ3 354 aa16.69■□□□□ 0.26
SREBF1-215ENST00000487401 TEFQ10587 303 aa16.69■□□□□ 0.26
SREBF1-215ENST00000487401 TTC5Q8N0Z6 440 aa16.69■□□□□ 0.26
SREBF1-215ENST00000487401 SRP68Q9UHB9 627 aaKnown RBP16.69■□□□□ 0.26
SREBF1-215ENST00000487401 ZPR1O75312 459 aa16.68■□□□□ 0.26
SREBF1-215ENST00000487401 CYP19A1P11511 503 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-215ENST00000487401 A0A0G2JLW4 131 aa16.67■□□□□ 0.26
SREBF1-215ENST00000487401 FKBP8Q14318 412 aa16.67■□□□□ 0.26
SREBF1-215ENST00000487401 VSIG10Q8N0Z9 540 aa16.67■□□□□ 0.26
SREBF1-215ENST00000487401 GOLGB1Q14789 3259 aaKnown RBP16.67■□□□□ 0.26
SREBF1-215ENST00000487401 USP42Q9H9J4 1324 aaKnown RBP16.67■□□□□ 0.26
SREBF1-215ENST00000487401 TAF1LQ8IZX4 1826 aa16.66■□□□□ 0.26
SREBF1-215ENST00000487401 GIGYF1O75420 1035 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-215ENST00000487401 STARD3NLO95772 234 aa16.66■□□□□ 0.26
SREBF1-215ENST00000487401 U2AF1L5P0DN76 240 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-215ENST00000487401 PPP2R1AP30153 589 aa16.66■□□□□ 0.26
SREBF1-215ENST00000487401 PRKAR2BP31323 418 aa16.66■□□□□ 0.26
SREBF1-215ENST00000487401 U2AF1Q01081 240 aaKnown RBP eCLIP16.66■□□□□ 0.26
SREBF1-215ENST00000487401 IL17REQ8NFR9 667 aa16.66■□□□□ 0.26
SREBF1-215ENST00000487401 C1QTNF8P60827 252 aa16.65■□□□□ 0.26
SREBF1-215ENST00000487401 BCS1LQ9Y276 419 aa16.65■□□□□ 0.26
SREBF1-215ENST00000487401 SOS1Q07889 1333 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-215ENST00000487401 DPEP1P16444 411 aa16.64■□□□□ 0.25
SREBF1-215ENST00000487401 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
SREBF1-215ENST00000487401 PHACTR3Q96KR7 559 aa16.64■□□□□ 0.25
SREBF1-215ENST00000487401 RSPH6AQ9H0K4 717 aa16.64■□□□□ 0.25
SREBF1-215ENST00000487401 COL3A1P02461 1466 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-215ENST00000487401 UBR3Q6ZT12 1888 aa16.64■□□□□ 0.25
SREBF1-215ENST00000487401 CANXP27824 592 aaKnown RBP16.63■□□□□ 0.25
SREBF1-215ENST00000487401 ZNF790Q6PG37 636 aa16.63■□□□□ 0.25
SREBF1-215ENST00000487401 TEX13AQ9BXU3 409 aaPredicted RBP16.63■□□□□ 0.25
SREBF1-215ENST00000487401 ZBTB1Q9Y2K1 713 aa16.63■□□□□ 0.25
SREBF1-215ENST00000487401 FCHSD2O94868 740 aa16.62■□□□□ 0.25
SREBF1-215ENST00000487401 TM4SF1P30408 202 aa16.62■□□□□ 0.25
SREBF1-215ENST00000487401 DDR1Q08345 913 aa16.62■□□□□ 0.25
SREBF1-215ENST00000487401 RTF1Q92541 710 aaKnown RBP16.62■□□□□ 0.25
SREBF1-215ENST00000487401 ZNF496Q96IT1 587 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-215ENST00000487401 NARFQ9UHQ1 456 aa16.62■□□□□ 0.25
SREBF1-215ENST00000487401 C10orf71Q711Q0 1435 aa16.62■□□□□ 0.25
SREBF1-215ENST00000487401 MRC1P22897 1456 aa16.61■□□□□ 0.25
SREBF1-215ENST00000487401 A0A087WZG4 1122 aa16.61■□□□□ 0.25
SREBF1-215ENST00000487401 ARHGAP27Q6ZUM4 889 aa16.61■□□□□ 0.25
SREBF1-215ENST00000487401 ZNF831Q5JPB2 1677 aa16.61■□□□□ 0.25
SREBF1-215ENST00000487401 PXDNLA1KZ92 1463 aa16.61■□□□□ 0.25
SREBF1-215ENST00000487401 BTBD11A6QL63 1104 aa16.6■□□□□ 0.25
SREBF1-215ENST00000487401 POLRMTO00411 1230 aaKnown RBP16.6■□□□□ 0.25
SREBF1-215ENST00000487401 FMNL2Q96PY5 1086 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms