RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 PANK3Q9H999 370 aa22.34■■□□□ 1.17
SRRT-212ENST00000487311 ATP10DQ9P241 1426 aa22.32■■□□□ 1.16
SRRT-212ENST00000487311 HSPA5P11021 654 aaKnown RBP22.31■■□□□ 1.16
SRRT-212ENST00000487311 ERVV-2B6SEH9 535 aa22.29■■□□□ 1.16
SRRT-212ENST00000487311 RBM42Q9BTD8 480 aaKnown RBP22.29■■□□□ 1.16
SRRT-212ENST00000487311 MMP10P09238 476 aa22.28■■□□□ 1.16
SRRT-212ENST00000487311 ZNF526Q8TF50 670 aaPredicted RBP22.28■■□□□ 1.16
SRRT-212ENST00000487311 CEP350Q5VT06 3117 aa22.28■■□□□ 1.16
SRRT-212ENST00000487311 ADCY9O60503 1353 aa22.27■■□□□ 1.16
SRRT-212ENST00000487311 KDRP35968 1356 aa22.27■■□□□ 1.16
SRRT-212ENST00000487311 TRAPPC3LQ5T215 181 aa22.27■■□□□ 1.16
SRRT-212ENST00000487311 AEBP1Q8IUX7 1158 aa22.27■■□□□ 1.16
SRRT-212ENST00000487311 ARHGEF1Q92888 912 aaKnown RBP22.27■■□□□ 1.16
SRRT-212ENST00000487311 DCAF5Q96JK2 942 aa22.27■■□□□ 1.16
SRRT-212ENST00000487311 CLSPNQ9HAW4 1339 aa22.27■■□□□ 1.16
SRRT-212ENST00000487311 EIF4G2P78344 907 aaKnown RBP eCLIP22.26■■□□□ 1.15
SRRT-212ENST00000487311 PLEKHO1Q53GL0 409 aaPredicted RBP22.26■■□□□ 1.15
SRRT-212ENST00000487311 GPBP1L1Q9HC44 474 aaPredicted RBP22.26■■□□□ 1.15
SRRT-212ENST00000487311 RTCBQ9Y3I0 505 aaKnown RBP22.26■■□□□ 1.15
SRRT-212ENST00000487311 KDM6AO15550 1401 aaPredicted RBP22.24■■□□□ 1.15
SRRT-212ENST00000487311 RC3H1Q5TC82 1133 aaKnown RBP22.24■■□□□ 1.15
SRRT-212ENST00000487311 ZNF530Q6P9A1 599 aaPredicted RBP22.24■■□□□ 1.15
SRRT-212ENST00000487311 HSP90AB1P08238 724 aaKnown RBP22.23■■□□□ 1.15
SRRT-212ENST00000487311 CABP4P57796 275 aa22.23■■□□□ 1.15
SRRT-212ENST00000487311 A0A0G2JLW4 131 aa22.22■■□□□ 1.15
SRRT-212ENST00000487311 RPS6KA4O75676 772 aa22.22■■□□□ 1.15
SRRT-212ENST00000487311 NLGN1Q8N2Q7 840 aa22.22■■□□□ 1.15
SRRT-212ENST00000487311 PLEKHG2Q9H7P9 1386 aa22.22■■□□□ 1.15
SRRT-212ENST00000487311 GYS1P13807 737 aa22.21■■□□□ 1.15
SRRT-212ENST00000487311 MTHFSP49914 203 aa22.21■■□□□ 1.15
SRRT-212ENST00000487311 AMOTQ4VCS5 1084 aa22.21■■□□□ 1.15
SRRT-212ENST00000487311 MORC1Q86VD1 984 aa22.21■■□□□ 1.15
SRRT-212ENST00000487311 NFATC2IPQ8NCF5 419 aa22.21■■□□□ 1.15
SRRT-212ENST00000487311 PTCD1O75127 700 aaKnown RBP22.2■■□□□ 1.14
SRRT-212ENST00000487311 CNTNAP4Q9C0A0 1308 aa22.2■■□□□ 1.14
SRRT-212ENST00000487311 PXDNLA1KZ92 1463 aa22.2■■□□□ 1.14
SRRT-212ENST00000487311 MYH14Q7Z406 1995 aaKnown RBP22.19■■□□□ 1.14
SRRT-212ENST00000487311 RFC4P35249 363 aa22.19■■□□□ 1.14
SRRT-212ENST00000487311 TGFB2P61812 414 aa22.19■■□□□ 1.14
SRRT-212ENST00000487311 SULT6B1Q6IMI4 303 aa22.19■■□□□ 1.14
SRRT-212ENST00000487311 N4BP2Q86UW6 1770 aaPredicted RBP22.18■■□□□ 1.14
SRRT-212ENST00000487311 CICQ96RK0 1608 aaPredicted RBP22.18■■□□□ 1.14
SRRT-212ENST00000487311 ADRA2BP18089 450 aa22.18■■□□□ 1.14
SRRT-212ENST00000487311 IL13P35225 146 aa22.18■■□□□ 1.14
SRRT-212ENST00000487311 KIAA1551Q9HCM1 1747 aa22.17■■□□□ 1.14
SRRT-212ENST00000487311 ZNF831Q5JPB2 1677 aa22.17■■□□□ 1.14
SRRT-212ENST00000487311 DPEP1P16444 411 aa22.17■■□□□ 1.14
SRRT-212ENST00000487311 BCS1LQ9Y276 419 aa22.17■■□□□ 1.14
SRRT-212ENST00000487311 KIF13BQ9NQT8 1826 aa22.17■■□□□ 1.14
SRRT-212ENST00000487311 COL5A3P25940 1745 aaPredicted RBP22.17■■□□□ 1.14
SRRT-212ENST00000487311 KIF3CO14782 793 aa22.16■■□□□ 1.14
SRRT-212ENST00000487311 KCNA3P22001 575 aa22.16■■□□□ 1.14
SRRT-212ENST00000487311 SRP68Q9UHB9 627 aaKnown RBP22.16■■□□□ 1.14
SRRT-212ENST00000487311 CRKLP46109 303 aaKnown RBP22.15■■□□□ 1.14
SRRT-212ENST00000487311 C1orf141Q5JVX7 400 aa22.15■■□□□ 1.14
SRRT-212ENST00000487311 CCDC87Q9NVE4 849 aa22.14■■□□□ 1.13
SRRT-212ENST00000487311 PARP3Q9Y6F1 533 aa22.14■■□□□ 1.13
SRRT-212ENST00000487311 C10orf71Q711Q0 1435 aa22.14■■□□□ 1.13
SRRT-212ENST00000487311 HSPA6P17066 643 aa22.13■■□□□ 1.13
SRRT-212ENST00000487311 ARHGAP27Q6ZUM4 889 aa22.13■■□□□ 1.13
SRRT-212ENST00000487311 LGR6Q9HBX8 967 aa22.13■■□□□ 1.13
SRRT-212ENST00000487311 KNSTRNQ9Y448 316 aa22.13■■□□□ 1.13
SRRT-212ENST00000487311 FKBP8Q14318 412 aa22.12■■□□□ 1.13
SRRT-212ENST00000487311 AMER1Q5JTC6 1135 aaPredicted RBP22.12■■□□□ 1.13
SRRT-212ENST00000487311 INTS5Q6P9B9 1019 aaKnown RBP22.12■■□□□ 1.13
SRRT-212ENST00000487311 C4AP0C0L4 1744 aa22.11■■□□□ 1.13
SRRT-212ENST00000487311 FCHSD2O94868 740 aa22.1■■□□□ 1.13
SRRT-212ENST00000487311 DDR1Q08345 913 aa22.1■■□□□ 1.13
SRRT-212ENST00000487311 USP42Q9H9J4 1324 aaKnown RBP22.08■■□□□ 1.13
SRRT-212ENST00000487311 AKAP4Q5JQC9 854 aa22.08■■□□□ 1.13
SRRT-212ENST00000487311 DNAJC10Q8IXB1 793 aa22.08■■□□□ 1.13
SRRT-212ENST00000487311 HMOX1P09601 288 aa22.07■■□□□ 1.12
SRRT-212ENST00000487311 SLC39A6Q13433 755 aa22.07■■□□□ 1.12
SRRT-212ENST00000487311 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
SRRT-212ENST00000487311 SLC52A2Q9HAB3 445 aa22.07■■□□□ 1.12
SRRT-212ENST00000487311 TJP1Q07157 1748 aa22.06■■□□□ 1.12
SRRT-212ENST00000487311 TM4SF1P30408 202 aa22.06■■□□□ 1.12
SRRT-212ENST00000487311 SCN11AQ9UI33 1791 aa22.06■■□□□ 1.12
SRRT-212ENST00000487311 BRCA1P38398 1863 aaKnown RBP22.05■■□□□ 1.12
SRRT-212ENST00000487311 RNMTO43148 476 aaKnown RBP22.05■■□□□ 1.12
SRRT-212ENST00000487311 POLRMTO00411 1230 aaKnown RBP22.04■■□□□ 1.12
SRRT-212ENST00000487311 PER1O15534 1290 aaPredicted RBP22.04■■□□□ 1.12
SRRT-212ENST00000487311 CHRNA5P30532 468 aa22.04■■□□□ 1.12
SRRT-212ENST00000487311 IFFO2Q5TF58 517 aa22.04■■□□□ 1.12
SRRT-212ENST00000487311 NMRK2Q9NPI5 230 aa22.04■■□□□ 1.12
SRRT-212ENST00000487311 PIM2Q9P1W9 311 aa22.04■■□□□ 1.12
SRRT-212ENST00000487311 KIF7Q2M1P5 1343 aa22.04■■□□□ 1.12
SRRT-212ENST00000487311 CYP19A1P11511 503 aaPredicted RBP22.03■■□□□ 1.12
SRRT-212ENST00000487311 MTHFSDQ2M296 383 aaKnown RBP22.03■■□□□ 1.12
SRRT-212ENST00000487311 C9orf131Q5VYM1 1079 aa22.03■■□□□ 1.12
SRRT-212ENST00000487311 USPL1Q5W0Q7 1092 aa22.03■■□□□ 1.12
SRRT-212ENST00000487311 ADAMTS7Q9UKP4 1686 aa22.03■■□□□ 1.12
SRRT-212ENST00000487311 SOS1Q07889 1333 aaPredicted RBP22.02■■□□□ 1.12
SRRT-212ENST00000487311 DALRD3Q5D0E6 543 aaKnown RBP22.01■■□□□ 1.11
SRRT-212ENST00000487311 TOMM70O94826 608 aa22■■□□□ 1.11
SRRT-212ENST00000487311 CC2D1BQ5T0F9 858 aaKnown RBP22■■□□□ 1.11
SRRT-212ENST00000487311 ZPR1O75312 459 aa21.99■■□□□ 1.11
SRRT-212ENST00000487311 BCL2L12Q9HB09 334 aa21.99■■□□□ 1.11
SRRT-212ENST00000487311 ZBTB1Q9Y2K1 713 aa21.99■■□□□ 1.11
SRRT-212ENST00000487311 NFIXQ14938 502 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms