RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 DISP2A7MBM2 1401 aa10.29□□□□□ -0.76
ZNF541-204ENST00000487275 NWD2Q9ULI1 1742 aa10.29□□□□□ -0.76
ZNF541-204ENST00000487275 SOS1Q07889 1333 aaPredicted RBP10.29□□□□□ -0.76
ZNF541-204ENST00000487275 SPATA31A5Q5VU36 1347 aa10.29□□□□□ -0.76
ZNF541-204ENST00000487275 SPATA31A7Q8IWB4 1347 aa10.29□□□□□ -0.76
ZNF541-204ENST00000487275 LRP6O75581 1613 aa10.29□□□□□ -0.76
ZNF541-204ENST00000487275 EXOC5O00471 708 aa10.28□□□□□ -0.76
ZNF541-204ENST00000487275 BRPF1P55201 1214 aaPredicted RBP10.28□□□□□ -0.76
ZNF541-204ENST00000487275 PDE3AQ14432 1141 aa10.28□□□□□ -0.76
ZNF541-204ENST00000487275 C20orf194Q5TEA3 1177 aa10.28□□□□□ -0.76
ZNF541-204ENST00000487275 MRPL50Q8N5N7 158 aaKnown RBP10.28□□□□□ -0.76
ZNF541-204ENST00000487275 ADAMTS7Q9UKP4 1686 aa10.28□□□□□ -0.76
ZNF541-204ENST00000487275 TCERG1O14776 1098 aaKnown RBP10.27□□□□□ -0.77
ZNF541-204ENST00000487275 EIF4A1P60842 406 aaKnown RBP10.27□□□□□ -0.77
ZNF541-204ENST00000487275 NKX1-1Q15270 411 aaPredicted RBP10.27□□□□□ -0.77
ZNF541-204ENST00000487275 VPS72Q15906 364 aa10.27□□□□□ -0.77
ZNF541-204ENST00000487275 FTSJ3Q8IY81 847 aaKnown RBP10.27□□□□□ -0.77
ZNF541-204ENST00000487275 FNBP4Q8N3X1 1017 aaPredicted RBP10.27□□□□□ -0.77
ZNF541-204ENST00000487275 CHMP4AQ9BY43 222 aa10.27□□□□□ -0.77
ZNF541-204ENST00000487275 USP21Q9UK80 565 aa10.27□□□□□ -0.77
ZNF541-204ENST00000487275 NOB1Q9ULX3 412 aaKnown RBP10.27□□□□□ -0.77
ZNF541-204ENST00000487275 MRC1P22897 1456 aa10.26□□□□□ -0.77
ZNF541-204ENST00000487275 ERVV-2B6SEH9 535 aa10.26□□□□□ -0.77
ZNF541-204ENST00000487275 KCNQ3O43525 872 aa10.26□□□□□ -0.77
ZNF541-204ENST00000487275 HOXB7P09629 217 aa10.26□□□□□ -0.77
ZNF541-204ENST00000487275 CCDC30Q5VVM6 783 aa10.26□□□□□ -0.77
ZNF541-204ENST00000487275 ATF7IPQ6VMQ6 1270 aa10.26□□□□□ -0.77
ZNF541-204ENST00000487275 BARGINQ6ZT62 677 aa10.26□□□□□ -0.77
ZNF541-204ENST00000487275 DZIP1LQ8IYY4 767 aaKnown RBP10.26□□□□□ -0.77
ZNF541-204ENST00000487275 TTC5Q8N0Z6 440 aa10.26□□□□□ -0.77
ZNF541-204ENST00000487275 NFATC2IPQ8NCF5 419 aa10.26□□□□□ -0.77
ZNF541-204ENST00000487275 PANK1Q8TE04 598 aa10.26□□□□□ -0.77
ZNF541-204ENST00000487275 STK31Q9BXU1 1019 aa10.26□□□□□ -0.77
ZNF541-204ENST00000487275 SCN11AQ9UI33 1791 aa10.26□□□□□ -0.77
ZNF541-204ENST00000487275 TNS2Q63HR2 1409 aa10.25□□□□□ -0.77
ZNF541-204ENST00000487275 BCL9LQ86UU0 1499 aa10.25□□□□□ -0.77
ZNF541-204ENST00000487275 KDM3BQ7LBC6 1761 aa10.25□□□□□ -0.77
ZNF541-204ENST00000487275 DDB1Q16531 1140 aa10.25□□□□□ -0.77
ZNF541-204ENST00000487275 ARHGAP45Q92619 1136 aa10.25□□□□□ -0.77
ZNF541-204ENST00000487275 CLUAP1Q96AJ1 413 aa10.25□□□□□ -0.77
ZNF541-204ENST00000487275 VIRMAQ69YN4 1812 aaKnown RBP10.24□□□□□ -0.77
ZNF541-204ENST00000487275 TRIM27P14373 513 aa10.24□□□□□ -0.77
ZNF541-204ENST00000487275 SLC39A6Q13433 755 aa10.24□□□□□ -0.77
ZNF541-204ENST00000487275 HDGFL1Q5TGJ6 251 aa10.24□□□□□ -0.77
ZNF541-204ENST00000487275 ZNF790Q6PG37 636 aa10.24□□□□□ -0.77
ZNF541-204ENST00000487275 CCDC136Q96JN2 1154 aa10.24□□□□□ -0.77
ZNF541-204ENST00000487275 API5Q9BZZ5 524 aaKnown RBP10.24□□□□□ -0.77
ZNF541-204ENST00000487275 COG6Q9Y2V7 657 aa10.24□□□□□ -0.77
ZNF541-204ENST00000487275 AFF2P51816 1311 aa10.24□□□□□ -0.77
ZNF541-204ENST00000487275 SHANK3Q9BYB0 1731 aa10.24□□□□□ -0.77
ZNF541-204ENST00000487275 SIPA1L3O60292 1781 aaPredicted RBP10.24□□□□□ -0.77
ZNF541-204ENST00000487275 WNK3Q9BYP7 1800 aa10.23□□□□□ -0.77
ZNF541-204ENST00000487275 SLC4A2P04920 1241 aa10.23□□□□□ -0.77
ZNF541-204ENST00000487275 EIF2S2P20042 333 aaKnown RBP10.23□□□□□ -0.77
ZNF541-204ENST00000487275 FAM98CQ17RN3 349 aaKnown RBP10.23□□□□□ -0.77
ZNF541-204ENST00000487275 B4GALNT3Q6L9W6 998 aa10.23□□□□□ -0.77
ZNF541-204ENST00000487275 NECTIN2Q92692 538 aa10.23□□□□□ -0.77
ZNF541-204ENST00000487275 FMNL2Q96PY5 1086 aa10.23□□□□□ -0.77
ZNF541-204ENST00000487275 TMOD3Q9NYL9 352 aa10.23□□□□□ -0.77
ZNF541-204ENST00000487275 TNNQ9UQP3 1299 aa10.23□□□□□ -0.77
ZNF541-204ENST00000487275 A0A0G2JS52 829 aa10.22□□□□□ -0.77
ZNF541-204ENST00000487275 GIGYF1O75420 1035 aaPredicted RBP10.22□□□□□ -0.77
ZNF541-204ENST00000487275 RLBP1P12271 317 aa10.22□□□□□ -0.77
ZNF541-204ENST00000487275 MYT1Q01538 1121 aa10.22□□□□□ -0.77
ZNF541-204ENST00000487275 MVPQ14764 893 aaKnown RBP10.22□□□□□ -0.77
ZNF541-204ENST00000487275 PTPRCP08575 1304 aa10.22□□□□□ -0.77
ZNF541-204ENST00000487275 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.21□□□□□ -0.77
ZNF541-204ENST00000487275 ITPRIPQ8IWB1 547 aa10.21□□□□□ -0.77
ZNF541-204ENST00000487275 TMEM57Q8N5G2 664 aa10.21□□□□□ -0.77
ZNF541-204ENST00000487275 TRPC5Q9UL62 973 aaPredicted RBP10.21□□□□□ -0.77
ZNF541-204ENST00000487275 HEG1Q9ULI3 1381 aa10.21□□□□□ -0.78
ZNF541-204ENST00000487275 SNRPA1P09661 255 aaKnown RBP10.2□□□□□ -0.78
ZNF541-204ENST00000487275 AAMPQ13685 434 aa10.2□□□□□ -0.78
ZNF541-204ENST00000487275 ZNF496Q96IT1 587 aaPredicted RBP10.2□□□□□ -0.78
ZNF541-204ENST00000487275 GJD4Q96KN9 370 aaPredicted RBP10.2□□□□□ -0.78
ZNF541-204ENST00000487275 DDX19BQ9UMR2 479 aa10.2□□□□□ -0.78
ZNF541-204ENST00000487275 ATRNO75882 1429 aa10.19□□□□□ -0.78
ZNF541-204ENST00000487275 ABCC4O15439 1325 aa10.19□□□□□ -0.78
ZNF541-204ENST00000487275 PRAMEF22A3QJZ6 481 aa10.19□□□□□ -0.78
ZNF541-204ENST00000487275 FLIIQ13045 1269 aa10.19□□□□□ -0.78
ZNF541-204ENST00000487275 G2E3Q7L622 706 aa10.19□□□□□ -0.78
ZNF541-204ENST00000487275 MARCH10Q8NA82 808 aaPredicted RBP10.19□□□□□ -0.78
ZNF541-204ENST00000487275 PIGBQ92521 554 aa10.19□□□□□ -0.78
ZNF541-204ENST00000487275 SYTL4Q96C24 671 aaPredicted RBP10.19□□□□□ -0.78
ZNF541-204ENST00000487275 CHMP4BQ9H444 224 aaKnown RBP10.19□□□□□ -0.78
ZNF541-204ENST00000487275 CHPF2Q9P2E5 772 aa10.19□□□□□ -0.78
ZNF541-204ENST00000487275 DBF4Q9UBU7 674 aaPredicted RBP10.19□□□□□ -0.78
ZNF541-204ENST00000487275 PRIM1P49642 420 aaKnown RBP10.18□□□□□ -0.78
ZNF541-204ENST00000487275 FKBP5Q13451 457 aaPredicted RBP10.18□□□□□ -0.78
ZNF541-204ENST00000487275 PELP1Q8IZL8 1130 aaKnown RBP10.18□□□□□ -0.78
ZNF541-204ENST00000487275 TOGARAM1Q9Y4F4 1720 aa10.18□□□□□ -0.78
ZNF541-204ENST00000487275 PTCD1O75127 700 aaKnown RBP10.17□□□□□ -0.78
ZNF541-204ENST00000487275 ACSBG1Q96GR2 724 aa10.17□□□□□ -0.78
ZNF541-204ENST00000487275 QTRT2Q9H974 415 aaKnown RBP10.17□□□□□ -0.78
ZNF541-204ENST00000487275 HYPKQ9NX55 129 aa10.17□□□□□ -0.78
ZNF541-204ENST00000487275 BCL9O00512 1426 aa10.16□□□□□ -0.78
ZNF541-204ENST00000487275 PAPPAQ13219 1627 aa10.16□□□□□ -0.78
ZNF541-204ENST00000487275 ANXA1P04083 346 aa10.16□□□□□ -0.78
ZNF541-204ENST00000487275 INTS3Q68E01 1043 aaKnown RBP10.16□□□□□ -0.78
ZNF541-204ENST00000487275 SLC4A10Q6U841 1118 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms