RNA–Protein interactions for RNA: ENST00000487164.5

TCEA2-216, Transcript of transcription elongation factor A2, human

TSL 1 (best)

Gene TCEA2, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCEA2-216	ENST00000487164	GNPAT	O15228	680 aa		32.95	■■■□□ 2.87
TCEA2-216	ENST00000487164	MORC1	Q86VD1	984 aa		32.95	■■■□□ 2.87
TCEA2-216	ENST00000487164	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.93	■■■□□ 2.86
TCEA2-216	ENST00000487164	ERVV-2	B6SEH9	535 aa		32.92	■■■□□ 2.86
TCEA2-216	ENST00000487164	HSP90AB1	P08238	724 aa	Known RBP	32.91	■■■□□ 2.86
TCEA2-216	ENST00000487164	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.91	■■■□□ 2.86
TCEA2-216	ENST00000487164	AEBP1	Q8IUX7	1158 aa		32.91	■■■□□ 2.86
TCEA2-216	ENST00000487164	DCAF5	Q96JK2	942 aa		32.91	■■■□□ 2.86
TCEA2-216	ENST00000487164	KDR	P35968	1356 aa		32.91	■■■□□ 2.86
TCEA2-216	ENST00000487164	C1QTNF8	P60827	252 aa		32.9	■■■□□ 2.86
TCEA2-216	ENST00000487164	KDM6A	O15550	1401 aa	Predicted RBP	32.9	■■■□□ 2.86
TCEA2-216	ENST00000487164	AMOT	Q4VCS5	1084 aa		32.88	■■■□□ 2.85
TCEA2-216	ENST00000487164	SLC4A9	Q96Q91	983 aa		32.88	■■■□□ 2.85
TCEA2-216	ENST00000487164	KNSTRN	Q9Y448	316 aa		32.88	■■■□□ 2.85
TCEA2-216	ENST00000487164	RBM42	Q9BTD8	480 aa	Known RBP	32.87	■■■□□ 2.85
TCEA2-216	ENST00000487164	ZNF831	Q5JPB2	1677 aa		32.85	■■■□□ 2.85
TCEA2-216	ENST00000487164	CABP4	P57796	275 aa		32.84	■■■□□ 2.85
TCEA2-216	ENST00000487164	GIGYF1	O75420	1035 aa	Predicted RBP	32.83	■■■□□ 2.85
TCEA2-216	ENST00000487164	SULT6B1	Q6IMI4	303 aa		32.83	■■■□□ 2.85
TCEA2-216	ENST00000487164	WWC3	Q9ULE0	1092 aa		32.83	■■■□□ 2.85
TCEA2-216	ENST00000487164	MTHFS	P49914	203 aa		32.82	■■■□□ 2.84
TCEA2-216	ENST00000487164	RTCB	Q9Y3I0	505 aa	Known RBP	32.82	■■■□□ 2.84
TCEA2-216	ENST00000487164	COL5A3	P25940	1745 aa	Predicted RBP	32.82	■■■□□ 2.84
TCEA2-216	ENST00000487164	SENP3-EIF4A1	A0A087X0R7	540 aa		32.81	■■■□□ 2.84
TCEA2-216	ENST00000487164	IL13	P35225	146 aa		32.81	■■■□□ 2.84
TCEA2-216	ENST00000487164	C1orf141	Q5JVX7	400 aa		32.81	■■■□□ 2.84
TCEA2-216	ENST00000487164	MMP10	P09238	476 aa		32.8	■■■□□ 2.84
TCEA2-216	ENST00000487164	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.8	■■■□□ 2.84
TCEA2-216	ENST00000487164	TRAPPC3L	Q5T215	181 aa		32.8	■■■□□ 2.84
TCEA2-216	ENST00000487164	KIF7	Q2M1P5	1343 aa		32.78	■■■□□ 2.84
TCEA2-216	ENST00000487164	CNTNAP4	Q9C0A0	1308 aa		32.77	■■■□□ 2.84
TCEA2-216	ENST00000487164	RC3H1	Q5TC82	1133 aa	Known RBP	32.77	■■■□□ 2.84
TCEA2-216	ENST00000487164	ATP10D	Q9P241	1426 aa		32.77	■■■□□ 2.84
TCEA2-216	ENST00000487164	ARHGEF1	Q92888	912 aa	Known RBP	32.76	■■■□□ 2.83
TCEA2-216	ENST00000487164	NFATC2IP	Q8NCF5	419 aa		32.75	■■■□□ 2.83
TCEA2-216	ENST00000487164	PTCD1	O75127	700 aa	Known RBP	32.74	■■■□□ 2.83
TCEA2-216	ENST00000487164	ADRA2B	P18089	450 aa		32.74	■■■□□ 2.83
TCEA2-216	ENST00000487164	MYH14	Q7Z406	1995 aa	Known RBP	32.74	■■■□□ 2.83
TCEA2-216	ENST00000487164	CIC	Q96RK0	1608 aa	Predicted RBP	32.73	■■■□□ 2.83
TCEA2-216	ENST00000487164	RPS6KA4	O75676	772 aa		32.73	■■■□□ 2.83
TCEA2-216	ENST00000487164	NLGN1	Q8N2Q7	840 aa		32.72	■■■□□ 2.83
TCEA2-216	ENST00000487164	SCN11A	Q9UI33	1791 aa		32.72	■■■□□ 2.83
TCEA2-216	ENST00000487164	KIF13B	Q9NQT8	1826 aa		32.71	■■■□□ 2.83
TCEA2-216	ENST00000487164	RFC4	P35249	363 aa		32.7	■■■□□ 2.83
TCEA2-216	ENST00000487164	C4A	P0C0L4	1744 aa		32.7	■■■□□ 2.83
TCEA2-216	ENST00000487164	ADCY9	O60503	1353 aa		32.7	■■■□□ 2.82
TCEA2-216	ENST00000487164	PXDNL	A1KZ92	1463 aa		32.69	■■■□□ 2.82
TCEA2-216	ENST00000487164	GYS1	P13807	737 aa		32.69	■■■□□ 2.82
TCEA2-216	ENST00000487164	KIAA1551	Q9HCM1	1747 aa		32.68	■■■□□ 2.82
TCEA2-216	ENST00000487164	TJP1	Q07157	1748 aa		32.68	■■■□□ 2.82
TCEA2-216	ENST00000487164	AKAP4	Q5JQC9	854 aa		32.67	■■■□□ 2.82
TCEA2-216	ENST00000487164	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.66	■■■□□ 2.82
TCEA2-216	ENST00000487164	CRKL	P46109	303 aa	Known RBP	32.66	■■■□□ 2.82
TCEA2-216	ENST00000487164	C10orf71	Q711Q0	1435 aa		32.66	■■■□□ 2.82
TCEA2-216	ENST00000487164	PER1	O15534	1290 aa	Predicted RBP	32.65	■■■□□ 2.82
TCEA2-216	ENST00000487164	HMOX1	P09601	288 aa		32.65	■■■□□ 2.82
TCEA2-216	ENST00000487164	CC2D1B	Q5T0F9	858 aa	Known RBP	32.64	■■■□□ 2.82
TCEA2-216	ENST00000487164	ZNF526	Q8TF50	670 aa	Predicted RBP	32.64	■■■□□ 2.82
TCEA2-216	ENST00000487164	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.64	■■■□□ 2.82
TCEA2-216	ENST00000487164	TGFB2	P61812	414 aa		32.63	■■■□□ 2.81
TCEA2-216	ENST00000487164	LGR6	Q9HBX8	967 aa		32.63	■■■□□ 2.81
TCEA2-216	ENST00000487164	CCDC87	Q9NVE4	849 aa		32.63	■■■□□ 2.81
TCEA2-216	ENST00000487164		A0A0G2JLW4	131 aa		32.62	■■■□□ 2.81
TCEA2-216	ENST00000487164	PARP3	Q9Y6F1	533 aa		32.62	■■■□□ 2.81
TCEA2-216	ENST00000487164	SLC52A2	Q9HAB3	445 aa		32.61	■■■□□ 2.81
TCEA2-216	ENST00000487164	SRP68	Q9UHB9	627 aa	Known RBP	32.61	■■■□□ 2.81
TCEA2-216	ENST00000487164	VIRMA	Q69YN4	1812 aa	Known RBP	32.59	■■■□□ 2.81
TCEA2-216	ENST00000487164	DIAPH1	O60610	1272 aa	Known RBP	32.58	■■■□□ 2.81
TCEA2-216	ENST00000487164	INTS5	Q6P9B9	1019 aa	Known RBP	32.58	■■■□□ 2.81
TCEA2-216	ENST00000487164	BCS1L	Q9Y276	419 aa		32.58	■■■□□ 2.81
TCEA2-216	ENST00000487164	MRC1	P22897	1456 aa		32.58	■■■□□ 2.81
TCEA2-216	ENST00000487164	USP42	Q9H9J4	1324 aa	Known RBP	32.57	■■■□□ 2.8
TCEA2-216	ENST00000487164	RNMT	O43148	476 aa	Known RBP	32.57	■■■□□ 2.8
TCEA2-216	ENST00000487164	DPEP1	P16444	411 aa		32.57	■■■□□ 2.8
TCEA2-216	ENST00000487164	DNAJC10	Q8IXB1	793 aa		32.57	■■■□□ 2.8
TCEA2-216	ENST00000487164	FKBP8	Q14318	412 aa		32.56	■■■□□ 2.8
TCEA2-216	ENST00000487164	MTHFSD	Q2M296	383 aa	Known RBP	32.56	■■■□□ 2.8
TCEA2-216	ENST00000487164	SLC39A6	Q13433	755 aa		32.55	■■■□□ 2.8
TCEA2-216	ENST00000487164	ADAMTS7	Q9UKP4	1686 aa		32.53	■■■□□ 2.8
TCEA2-216	ENST00000487164	BRCA1	P38398	1863 aa	Known RBP	32.53	■■■□□ 2.8
TCEA2-216	ENST00000487164	CNGB1	Q14028	1251 aa	Predicted RBP	32.53	■■■□□ 2.8
TCEA2-216	ENST00000487164	DDR1	Q08345	913 aa		32.52	■■■□□ 2.8
TCEA2-216	ENST00000487164	KCP	Q6ZWJ8	1503 aa		32.51	■■■□□ 2.8
TCEA2-216	ENST00000487164	FCHSD2	O94868	740 aa		32.5	■■■□□ 2.79
TCEA2-216	ENST00000487164	SOS1	Q07889	1333 aa	Predicted RBP	32.5	■■■□□ 2.79
TCEA2-216	ENST00000487164	COL3A1	P02461	1466 aa	Predicted RBP	32.49	■■■□□ 2.79
TCEA2-216	ENST00000487164	CYP19A1	P11511	503 aa	Predicted RBP	32.49	■■■□□ 2.79
TCEA2-216	ENST00000487164	KCNA3	P22001	575 aa		32.49	■■■□□ 2.79
TCEA2-216	ENST00000487164	ARHGAP27	Q6ZUM4	889 aa		32.49	■■■□□ 2.79
TCEA2-216	ENST00000487164	NPC1L1	Q9UHC9	1359 aa		32.48	■■■□□ 2.79
TCEA2-216	ENST00000487164	ZPR1	O75312	459 aa		32.46	■■■□□ 2.79
TCEA2-216	ENST00000487164	USPL1	Q5W0Q7	1092 aa		32.46	■■■□□ 2.79
TCEA2-216	ENST00000487164	POLRMT	O00411	1230 aa	Known RBP	32.44	■■■□□ 2.78
TCEA2-216	ENST00000487164	U2SURP	O15042	1029 aa	Known RBP	32.44	■■■□□ 2.78
TCEA2-216	ENST00000487164	TM4SF1	P30408	202 aa		32.44	■■■□□ 2.78
TCEA2-216	ENST00000487164	ZBTB1	Q9Y2K1	713 aa		32.44	■■■□□ 2.78
TCEA2-216	ENST00000487164	ARFGEF1	Q9Y6D6	1849 aa		32.43	■■■□□ 2.78
TCEA2-216	ENST00000487164	KIF3C	O14782	793 aa		32.43	■■■□□ 2.78
TCEA2-216	ENST00000487164	PIM2	Q9P1W9	311 aa		32.43	■■■□□ 2.78
TCEA2-216	ENST00000487164	CEP350	Q5VT06	3117 aa		32.43	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms