RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 MTMR7Q9Y216 660 aa8.66□□□□□ -1.02
PRPF38A-203ENST00000487160 ATAD2Q6PL18 1390 aa8.65□□□□□ -1.02
PRPF38A-203ENST00000487160 TNFRSF10AO00220 468 aa8.65□□□□□ -1.02
PRPF38A-203ENST00000487160 EPHA4P54764 986 aa8.65□□□□□ -1.02
PRPF38A-203ENST00000487160 CCDC27Q2M243 656 aa8.65□□□□□ -1.02
PRPF38A-203ENST00000487160 CYP4X1Q8N118 509 aa8.65□□□□□ -1.02
PRPF38A-203ENST00000487160 SCG3Q8WXD2 468 aaKnown RBP8.65□□□□□ -1.02
PRPF38A-203ENST00000487160 ITPKCQ96DU7 683 aa8.65□□□□□ -1.02
PRPF38A-203ENST00000487160 SLC4A9Q96Q91 983 aa8.65□□□□□ -1.02
PRPF38A-203ENST00000487160 MKNK1Q9BUB5 465 aa8.65□□□□□ -1.02
PRPF38A-203ENST00000487160 SOWAHDA6NJG2 315 aa8.64□□□□□ -1.03
PRPF38A-203ENST00000487160 ADH1AP07327 375 aa8.64□□□□□ -1.03
PRPF38A-203ENST00000487160 IGFBP4P22692 258 aa8.64□□□□□ -1.03
PRPF38A-203ENST00000487160 CAPN12Q6ZSI9 719 aa8.64□□□□□ -1.03
PRPF38A-203ENST00000487160 KDF1Q8NAX2 398 aaPredicted RBP8.64□□□□□ -1.03
PRPF38A-203ENST00000487160 XAGE2Q96GT9 111 aa8.64□□□□□ -1.03
PRPF38A-203ENST00000487160 KLF16Q9BXK1 252 aaPredicted RBP8.64□□□□□ -1.03
PRPF38A-203ENST00000487160 TSPAN10Q9H1Z9 355 aaPredicted RBP8.64□□□□□ -1.03
PRPF38A-203ENST00000487160 SEPT3Q9UH03 358 aa8.64□□□□□ -1.03
PRPF38A-203ENST00000487160 A6NJY4 79 aa8.63□□□□□ -1.03
PRPF38A-203ENST00000487160 C21orf2O43822 256 aa8.63□□□□□ -1.03
PRPF38A-203ENST00000487160 ZIC2O95409 532 aaPredicted RBP8.63□□□□□ -1.03
PRPF38A-203ENST00000487160 ABL1P00519 1130 aa8.63□□□□□ -1.03
PRPF38A-203ENST00000487160 IL2RAP01589 272 aa8.63□□□□□ -1.03
PRPF38A-203ENST00000487160 WDR4P57081 412 aaKnown RBP8.63□□□□□ -1.03
PRPF38A-203ENST00000487160 ZFAND3Q9H8U3 227 aa8.63□□□□□ -1.03
PRPF38A-203ENST00000487160 A0A1W2PRU2 124 aa8.62□□□□□ -1.03
PRPF38A-203ENST00000487160 SMTNP53814 917 aa8.62□□□□□ -1.03
PRPF38A-203ENST00000487160 TBCELQ5QJ74 424 aa8.62□□□□□ -1.03
PRPF38A-203ENST00000487160 Q6ZVU0 165 aa8.62□□□□□ -1.03
PRPF38A-203ENST00000487160 NPM2Q86SE8 214 aaKnown RBP8.62□□□□□ -1.03
PRPF38A-203ENST00000487160 CHMP7Q8WUX9 453 aaPredicted RBP8.62□□□□□ -1.03
PRPF38A-203ENST00000487160 CNKSR1Q969H4 720 aa8.62□□□□□ -1.03
PRPF38A-203ENST00000487160 AGBL1Q96MI9 1066 aa8.62□□□□□ -1.03
PRPF38A-203ENST00000487160 ANO2Q9NQ90 1003 aa8.62□□□□□ -1.03
PRPF38A-203ENST00000487160 TOR4AQ9NXH8 423 aa8.62□□□□□ -1.03
PRPF38A-203ENST00000487160 SMPD1P17405 629 aa8.61□□□□□ -1.03
PRPF38A-203ENST00000487160 ZNF211Q13398 564 aaPredicted RBP8.61□□□□□ -1.03
PRPF38A-203ENST00000487160 GTF3C2Q8WUA4 911 aaPredicted RBP8.61□□□□□ -1.03
PRPF38A-203ENST00000487160 ESYT1Q9BSJ8 1104 aa8.61□□□□□ -1.03
PRPF38A-203ENST00000487160 SCHIP1Q9P0W5 487 aaPredicted RBP8.61□□□□□ -1.03
PRPF38A-203ENST00000487160 FOXO3O43524 673 aa8.6□□□□□ -1.03
PRPF38A-203ENST00000487160 PPP1R12BO60237 982 aaPredicted RBP8.6□□□□□ -1.03
PRPF38A-203ENST00000487160 PTCD1O75127 700 aaKnown RBP8.6□□□□□ -1.03
PRPF38A-203ENST00000487160 TIMP2P16035 220 aa8.6□□□□□ -1.03
PRPF38A-203ENST00000487160 PTGIRP43119 386 aa8.6□□□□□ -1.03
PRPF38A-203ENST00000487160 FOXK2Q01167 660 aa8.6□□□□□ -1.03
PRPF38A-203ENST00000487160 NAA30Q147X3 362 aaPredicted RBP8.6□□□□□ -1.03
PRPF38A-203ENST00000487160 MTFR1Q15390 333 aa8.6□□□□□ -1.03
PRPF38A-203ENST00000487160 FOXD4L5Q5VV16 416 aaPredicted RBP8.6□□□□□ -1.03
PRPF38A-203ENST00000487160 TRIM67Q6ZTA4 783 aa8.6□□□□□ -1.03
PRPF38A-203ENST00000487160 SLC9A9Q8IVB4 645 aa8.6□□□□□ -1.03
PRPF38A-203ENST00000487160 FOXD4L4Q8WXT5 416 aaPredicted RBP8.6□□□□□ -1.03
PRPF38A-203ENST00000487160 HRH3Q9Y5N1 445 aa8.6□□□□□ -1.03
PRPF38A-203ENST00000487160 RELBQ01201 579 aa8.59□□□□□ -1.03
PRPF38A-203ENST00000487160 CLN3Q13286 438 aa8.59□□□□□ -1.03
PRPF38A-203ENST00000487160 TLR1Q15399 786 aa8.59□□□□□ -1.03
PRPF38A-203ENST00000487160 ZNF395Q9H8N7 513 aaPredicted RBP8.59□□□□□ -1.03
PRPF38A-203ENST00000487160 BIN2Q9UBW5 565 aaPredicted RBP8.59□□□□□ -1.03
PRPF38A-203ENST00000487160 EGFL7Q9UHF1 273 aa8.59□□□□□ -1.03
PRPF38A-203ENST00000487160 DNMT3AQ9Y6K1 912 aaPredicted RBP8.59□□□□□ -1.03
PRPF38A-203ENST00000487160 MEN1O00255 615 aa8.58□□□□□ -1.04
PRPF38A-203ENST00000487160 ICMTO60725 284 aa8.58□□□□□ -1.04
PRPF38A-203ENST00000487160 CENPCQ03188 943 aa8.58□□□□□ -1.04
PRPF38A-203ENST00000487160 MTMR3Q13615 1198 aa8.58□□□□□ -1.04
PRPF38A-203ENST00000487160 COL26A1Q96A83 441 aa8.58□□□□□ -1.04
PRPF38A-203ENST00000487160 VTI1AQ96AJ9 217 aa8.58□□□□□ -1.04
PRPF38A-203ENST00000487160 USP3Q9Y6I4 520 aa8.58□□□□□ -1.04
PRPF38A-203ENST00000487160 H3BRB1 525 aa8.57□□□□□ -1.04
PRPF38A-203ENST00000487160 CDK2AP1O14519 115 aa8.57□□□□□ -1.04
PRPF38A-203ENST00000487160 PRR20EP86478 221 aa8.57□□□□□ -1.04
PRPF38A-203ENST00000487160 PRR20CP86479 221 aa8.57□□□□□ -1.04
PRPF38A-203ENST00000487160 PRR20DP86480 221 aa8.57□□□□□ -1.04
PRPF38A-203ENST00000487160 PRR20BP86481 221 aa8.57□□□□□ -1.04
PRPF38A-203ENST00000487160 PRR20AP86496 221 aa8.57□□□□□ -1.04
PRPF38A-203ENST00000487160 HPS1Q92902 700 aa8.57□□□□□ -1.04
PRPF38A-203ENST00000487160 TUT1Q9H6E5 874 aaKnown RBP8.57□□□□□ -1.04
PRPF38A-203ENST00000487160 IQSEC3Q9UPP2 1182 aaPredicted RBP8.57□□□□□ -1.04
PRPF38A-203ENST00000487160 FKBP4Q02790 459 aaKnown RBP eCLIP8.56□□□□□ -1.04
PRPF38A-203ENST00000487160 GLYCTKQ8IVS8 523 aa8.56□□□□□ -1.04
PRPF38A-203ENST00000487160 NLRP3Q96P20 1036 aa8.56□□□□□ -1.04
PRPF38A-203ENST00000487160 C2orf49Q9BVC5 232 aaPredicted RBP8.56□□□□□ -1.04
PRPF38A-203ENST00000487160 PSMA6P60900 246 aaKnown RBP8.55□□□□□ -1.04
PRPF38A-203ENST00000487160 STAG2Q8N3U4 1231 aa8.55□□□□□ -1.04
PRPF38A-203ENST00000487160 FHDC1Q9C0D6 1143 aaPredicted RBP8.55□□□□□ -1.04
PRPF38A-203ENST00000487160 SAP130Q9H0E3 1048 aa8.55□□□□□ -1.04
PRPF38A-203ENST00000487160 MEIOBQ8N635 442 aa8.54□□□□□ -1.04
PRPF38A-203ENST00000487160 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.54□□□□□ -1.04
PRPF38A-203ENST00000487160 MARSP56192 900 aaKnown RBP8.53□□□□□ -1.04
PRPF38A-203ENST00000487160 SF3B2Q13435 895 aaKnown RBP8.53□□□□□ -1.04
PRPF38A-203ENST00000487160 ECM1Q16610 540 aa8.53□□□□□ -1.04
PRPF38A-203ENST00000487160 PPARGC1BQ86YN6 1023 aaKnown RBP8.53□□□□□ -1.04
PRPF38A-203ENST00000487160 HELQQ8TDG4 1101 aa8.53□□□□□ -1.04
PRPF38A-203ENST00000487160 ZSCAN10Q96SZ4 725 aaPredicted RBP8.53□□□□□ -1.04
PRPF38A-203ENST00000487160 CABP1Q9NZU7 370 aa8.53□□□□□ -1.04
PRPF38A-203ENST00000487160 CHMP3Q9Y3E7 222 aa8.53□□□□□ -1.04
PRPF38A-203ENST00000487160 SERTM1A2A2V5 107 aa8.52□□□□□ -1.05
PRPF38A-203ENST00000487160 NOS2P35228 1153 aa8.52□□□□□ -1.05
PRPF38A-203ENST00000487160 TEAD4Q15561 434 aa8.52□□□□□ -1.05
PRPF38A-203ENST00000487160 SH3PXD2AQ5TCZ1 1133 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms