RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 ARHGAP27Q6ZUM4 889 aa10.76□□□□□ -0.69
PDPN-205ENST00000487038 AMIGO3Q86WK7 504 aa10.76□□□□□ -0.69
PDPN-205ENST00000487038 JMYQ8N9B5 988 aa10.76□□□□□ -0.69
PDPN-205ENST00000487038 KCPQ6ZWJ8 1503 aa10.75□□□□□ -0.69
PDPN-205ENST00000487038 CYP27B1O15528 508 aa10.75□□□□□ -0.69
PDPN-205ENST00000487038 FCHSD2O94868 740 aa10.75□□□□□ -0.69
PDPN-205ENST00000487038 COL13A1Q5TAT6 717 aaPredicted RBP10.75□□□□□ -0.69
PDPN-205ENST00000487038 LINC00116Q8NCU8 138 aa10.75□□□□□ -0.69
PDPN-205ENST00000487038 SIN3AQ96ST3 1273 aa10.75□□□□□ -0.69
PDPN-205ENST00000487038 CCDC87Q9NVE4 849 aa10.75□□□□□ -0.69
PDPN-205ENST00000487038 TMOD3Q9NYL9 352 aa10.75□□□□□ -0.69
PDPN-205ENST00000487038 DLEC1Q9Y238 1755 aa10.75□□□□□ -0.69
PDPN-205ENST00000487038 FBLN1P23142 703 aa10.74□□□□□ -0.69
PDPN-205ENST00000487038 ATP6V1AP38606 617 aa10.74□□□□□ -0.69
PDPN-205ENST00000487038 PRELPP51888 382 aa10.74□□□□□ -0.69
PDPN-205ENST00000487038 NLGN1Q8N2Q7 840 aa10.74□□□□□ -0.69
PDPN-205ENST00000487038 PIGBQ92521 554 aa10.74□□□□□ -0.69
PDPN-205ENST00000487038 SPG7Q9UQ90 795 aa10.74□□□□□ -0.69
PDPN-205ENST00000487038 CCDC88AQ3V6T2 1871 aa10.74□□□□□ -0.69
PDPN-205ENST00000487038 NCAPD2Q15021 1401 aa10.74□□□□□ -0.69
PDPN-205ENST00000487038 RTCBQ9Y3I0 505 aaKnown RBP10.73□□□□□ -0.69
PDPN-205ENST00000487038 A0A0G2JLW4 131 aa10.72□□□□□ -0.69
PDPN-205ENST00000487038 ADRA2BP18089 450 aa10.72□□□□□ -0.69
PDPN-205ENST00000487038 TMF1P82094 1093 aa10.72□□□□□ -0.69
PDPN-205ENST00000487038 NKX1-1Q15270 411 aaPredicted RBP10.72□□□□□ -0.69
PDPN-205ENST00000487038 HSP90AB2PQ58FF8 381 aa10.72□□□□□ -0.69
PDPN-205ENST00000487038 TRAPPC3LQ5T215 181 aa10.72□□□□□ -0.69
PDPN-205ENST00000487038 C9orf131Q5VYM1 1079 aa10.72□□□□□ -0.69
PDPN-205ENST00000487038 SMIM5Q71RC9 77 aa10.72□□□□□ -0.69
PDPN-205ENST00000487038 SMC1BQ8NDV3 1235 aa10.72□□□□□ -0.69
PDPN-205ENST00000487038 GGNBP2Q9H3C7 697 aa10.72□□□□□ -0.69
PDPN-205ENST00000487038 PARP3Q9Y6F1 533 aa10.72□□□□□ -0.69
PDPN-205ENST00000487038 KDRP35968 1356 aa10.71□□□□□ -0.69
PDPN-205ENST00000487038 HTRA3P83110 453 aa10.71□□□□□ -0.69
PDPN-205ENST00000487038 TONSLQ96HA7 1378 aa10.71□□□□□ -0.69
PDPN-205ENST00000487038 MYH14Q7Z406 1995 aaKnown RBP10.7□□□□□ -0.7
PDPN-205ENST00000487038 ZC3H4Q9UPT8 1303 aaKnown RBP10.7□□□□□ -0.7
PDPN-205ENST00000487038 FYB1O15117 783 aa10.7□□□□□ -0.7
PDPN-205ENST00000487038 DPEP1P16444 411 aa10.7□□□□□ -0.7
PDPN-205ENST00000487038 ITPK1Q13572 414 aa10.7□□□□□ -0.7
PDPN-205ENST00000487038 IFNL2Q8IZJ0 200 aa10.7□□□□□ -0.7
PDPN-205ENST00000487038 RNF181Q9P0P0 153 aa10.7□□□□□ -0.7
PDPN-205ENST00000487038 PIM2Q9P1W9 311 aa10.7□□□□□ -0.7
PDPN-205ENST00000487038 AFDNP55196 1824 aaKnown RBP10.7□□□□□ -0.7
PDPN-205ENST00000487038 DICER1Q9UPY3 1922 aaKnown RBP10.69□□□□□ -0.7
PDPN-205ENST00000487038 RFC4P35249 363 aa10.69□□□□□ -0.7
PDPN-205ENST00000487038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.69□□□□□ -0.7
PDPN-205ENST00000487038 ASAP1Q9ULH1 1129 aa10.69□□□□□ -0.7
PDPN-205ENST00000487038 VIRMAQ69YN4 1812 aaKnown RBP10.69□□□□□ -0.7
PDPN-205ENST00000487038 TJP1Q07157 1748 aa10.69□□□□□ -0.7
PDPN-205ENST00000487038 CNTNAP4Q9C0A0 1308 aa10.68□□□□□ -0.7
PDPN-205ENST00000487038 DALRD3Q5D0E6 543 aaKnown RBP10.68□□□□□ -0.7
PDPN-205ENST00000487038 DCAF5Q96JK2 942 aa10.68□□□□□ -0.7
PDPN-205ENST00000487038 RRAGCQ9HB90 399 aa10.68□□□□□ -0.7
PDPN-205ENST00000487038 ST20-MTHFSA0A0A6YYL1 179 aa10.67□□□□□ -0.7
PDPN-205ENST00000487038 HSPA1AP0DMV8 641 aaKnown RBP10.67□□□□□ -0.7
PDPN-205ENST00000487038 HSPA1BP0DMV9 641 aaKnown RBP10.67□□□□□ -0.7
PDPN-205ENST00000487038 GYS1P13807 737 aa10.67□□□□□ -0.7
PDPN-205ENST00000487038 PHKG2P15735 406 aa10.67□□□□□ -0.7
PDPN-205ENST00000487038 RC3H1Q5TC82 1133 aaKnown RBP10.67□□□□□ -0.7
PDPN-205ENST00000487038 ARHGEF1Q92888 912 aaKnown RBP10.67□□□□□ -0.7
PDPN-205ENST00000487038 TESK2Q96S53 571 aa10.67□□□□□ -0.7
PDPN-205ENST00000487038 ATG3Q9NT62 314 aa10.67□□□□□ -0.7
PDPN-205ENST00000487038 NRXN2Q9P2S2 1712 aa10.67□□□□□ -0.7
PDPN-205ENST00000487038 RBM42Q9BTD8 480 aaKnown RBP10.66□□□□□ -0.7
PDPN-205ENST00000487038 SCN11AQ9UI33 1791 aa10.65□□□□□ -0.7
PDPN-205ENST00000487038 PPM1GO15355 546 aaPredicted RBP10.65□□□□□ -0.7
PDPN-205ENST00000487038 RPS6KA4O75676 772 aa10.65□□□□□ -0.7
PDPN-205ENST00000487038 HSP90AB1P08238 724 aaKnown RBP10.65□□□□□ -0.7
PDPN-205ENST00000487038 KCNA3P22001 575 aa10.65□□□□□ -0.7
PDPN-205ENST00000487038 CDCA8Q53HL2 280 aa10.65□□□□□ -0.7
PDPN-205ENST00000487038 EMILIN1Q9Y6C2 1016 aa10.65□□□□□ -0.7
PDPN-205ENST00000487038 ADAMTS7Q9UKP4 1686 aa10.65□□□□□ -0.7
PDPN-205ENST00000487038 CACNA1SQ13698 1873 aa10.65□□□□□ -0.7
PDPN-205ENST00000487038 ERVV-2B6SEH9 535 aa10.64□□□□□ -0.71
PDPN-205ENST00000487038 KDM6AO15550 1401 aaPredicted RBP10.64□□□□□ -0.71
PDPN-205ENST00000487038 WASHC2AQ641Q2 1341 aa10.63□□□□□ -0.71
PDPN-205ENST00000487038 VEGFAP15692 232 aaPredicted RBP10.63□□□□□ -0.71
PDPN-205ENST00000487038 USP42Q9H9J4 1324 aaKnown RBP10.62□□□□□ -0.71
PDPN-205ENST00000487038 FER1L6Q2WGJ9 1857 aa10.62□□□□□ -0.71
PDPN-205ENST00000487038 LMNB1P20700 586 aa10.62□□□□□ -0.71
PDPN-205ENST00000487038 EYA1Q99502 592 aa10.62□□□□□ -0.71
PDPN-205ENST00000487038 ARFGEF2Q9Y6D5 1785 aa10.62□□□□□ -0.71
PDPN-205ENST00000487038 GLTPD2A6NH11 291 aa10.61□□□□□ -0.71
PDPN-205ENST00000487038 SLC4A9Q96Q91 983 aa10.61□□□□□ -0.71
PDPN-205ENST00000487038 SCN4AP35499 1836 aa10.61□□□□□ -0.71
PDPN-205ENST00000487038 CHRNA5P30532 468 aa10.6□□□□□ -0.71
PDPN-205ENST00000487038 CABP4P57796 275 aa10.6□□□□□ -0.71
PDPN-205ENST00000487038 RASSF7Q02833 373 aa10.6□□□□□ -0.71
PDPN-205ENST00000487038 ZPR1O75312 459 aa10.59□□□□□ -0.71
PDPN-205ENST00000487038 CRKLP46109 303 aaKnown RBP10.59□□□□□ -0.71
PDPN-205ENST00000487038 DDR1Q08345 913 aa10.59□□□□□ -0.71
PDPN-205ENST00000487038 FKBP8Q14318 412 aa10.59□□□□□ -0.71
PDPN-205ENST00000487038 DPY19L2Q6NUT2 758 aa10.59□□□□□ -0.71
PDPN-205ENST00000487038 SCN7AQ01118 1682 aa10.59□□□□□ -0.71
PDPN-205ENST00000487038 ANKRD31Q8N7Z5 1873 aa10.59□□□□□ -0.71
PDPN-205ENST00000487038 COL11A2P13942 1736 aaPredicted RBP10.58□□□□□ -0.72
PDPN-205ENST00000487038 POLRMTO00411 1230 aaKnown RBP10.58□□□□□ -0.72
PDPN-205ENST00000487038 AMOTQ4VCS5 1084 aa10.58□□□□□ -0.72
PDPN-205ENST00000487038 PLEKHO1Q53GL0 409 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms