RNA–Protein interactions for RNA: ENST00000486946.1

AGAP3-220, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 3

Gene AGAP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-220ENST00000486946 PRDM10Q9NQV6 1147 aa16.42■□□□□ 0.22
AGAP3-220ENST00000486946 PIM2Q9P1W9 311 aa16.42■□□□□ 0.22
AGAP3-220ENST00000486946 MAP3K19Q56UN5 1328 aa16.42■□□□□ 0.22
AGAP3-220ENST00000486946 TONSLQ96HA7 1378 aa16.41■□□□□ 0.22
AGAP3-220ENST00000486946 ARFGEF1Q9Y6D6 1849 aa16.41■□□□□ 0.22
AGAP3-220ENST00000486946 LOC102724428A0A0B4J2F2 783 aa16.41■□□□□ 0.22
AGAP3-220ENST00000486946 VEGFAP15692 232 aaPredicted RBP16.41■□□□□ 0.22
AGAP3-220ENST00000486946 KCNA3P22001 575 aa16.41■□□□□ 0.22
AGAP3-220ENST00000486946 SIK1P57059 783 aa16.41■□□□□ 0.22
AGAP3-220ENST00000486946 TMF1P82094 1093 aa16.41■□□□□ 0.22
AGAP3-220ENST00000486946 NBPF6Q5VWK0 638 aa16.41■□□□□ 0.22
AGAP3-220ENST00000486946 DCAF5Q96JK2 942 aa16.41■□□□□ 0.22
AGAP3-220ENST00000486946 NBPF4Q96M43 638 aa16.41■□□□□ 0.22
AGAP3-220ENST00000486946 PUS7Q96PZ0 661 aaKnown RBP16.41■□□□□ 0.22
AGAP3-220ENST00000486946 BRCA1P38398 1863 aaKnown RBP16.41■□□□□ 0.22
AGAP3-220ENST00000486946 FOXN1O15353 648 aa16.4■□□□□ 0.22
AGAP3-220ENST00000486946 DALRD3Q5D0E6 543 aaKnown RBP16.4■□□□□ 0.22
AGAP3-220ENST00000486946 USHBP1Q8N6Y0 703 aa16.4■□□□□ 0.22
AGAP3-220ENST00000486946 PIGBQ92521 554 aa16.4■□□□□ 0.22
AGAP3-220ENST00000486946 TESK2Q96S53 571 aa16.39■□□□□ 0.21
AGAP3-220ENST00000486946 TRAPPC3LQ5T215 181 aa16.38■□□□□ 0.21
AGAP3-220ENST00000486946 PARP3Q9Y6F1 533 aa16.38■□□□□ 0.21
AGAP3-220ENST00000486946 ZC3H4Q9UPT8 1303 aaKnown RBP16.38■□□□□ 0.21
AGAP3-220ENST00000486946 CYP27B1O15528 508 aa16.37■□□□□ 0.21
AGAP3-220ENST00000486946 ITPK1Q13572 414 aa16.37■□□□□ 0.21
AGAP3-220ENST00000486946 ITGB4P16144 1822 aa16.37■□□□□ 0.21
AGAP3-220ENST00000486946 MAP2P11137 1827 aaKnown RBP16.36■□□□□ 0.21
AGAP3-220ENST00000486946 GLTPD2A6NH11 291 aa16.36■□□□□ 0.21
AGAP3-220ENST00000486946 FBLN1P23142 703 aa16.36■□□□□ 0.21
AGAP3-220ENST00000486946 ATP6V1AP38606 617 aa16.36■□□□□ 0.21
AGAP3-220ENST00000486946 COG3Q96JB2 828 aa16.36■□□□□ 0.21
AGAP3-220ENST00000486946 MKRN1Q9UHC7 482 aaKnown RBP16.36■□□□□ 0.21
AGAP3-220ENST00000486946 RTCBQ9Y3I0 505 aaKnown RBP16.36■□□□□ 0.21
AGAP3-220ENST00000486946 SBF1O95248 1867 aa16.35■□□□□ 0.21
AGAP3-220ENST00000486946 ST20-MTHFSA0A0A6YYL1 179 aa16.35■□□□□ 0.21
AGAP3-220ENST00000486946 CTCFP49711 727 aaPredicted RBP16.35■□□□□ 0.21
AGAP3-220ENST00000486946 CREBZFQ9NS37 354 aa16.35■□□□□ 0.21
AGAP3-220ENST00000486946 C4AP0C0L4 1744 aa16.35■□□□□ 0.21
AGAP3-220ENST00000486946 AIDAQ96BJ3 306 aa16.34■□□□□ 0.21
AGAP3-220ENST00000486946 GYS1P13807 737 aa16.33■□□□□ 0.2
AGAP3-220ENST00000486946 ABHD8Q96I13 439 aa16.33■□□□□ 0.2
AGAP3-220ENST00000486946 RTL1A6NKG5 1358 aa16.33■□□□□ 0.2
AGAP3-220ENST00000486946 SMG6Q86US8 1419 aaKnown RBP16.33■□□□□ 0.2
AGAP3-220ENST00000486946 ADRA2BP18089 450 aa16.32■□□□□ 0.2
AGAP3-220ENST00000486946 MLLT1Q03111 559 aaPredicted RBP16.32■□□□□ 0.2
AGAP3-220ENST00000486946 ARHGEF1Q92888 912 aaKnown RBP16.32■□□□□ 0.2
AGAP3-220ENST00000486946 ASAP1Q9ULH1 1129 aa16.32■□□□□ 0.2
AGAP3-220ENST00000486946 KIF20BQ96Q89 1820 aa16.31■□□□□ 0.2
AGAP3-220ENST00000486946 RFC4P35249 363 aa16.31■□□□□ 0.2
AGAP3-220ENST00000486946 NKX1-1Q15270 411 aaPredicted RBP16.31■□□□□ 0.2
AGAP3-220ENST00000486946 TMOD3Q9NYL9 352 aa16.31■□□□□ 0.2
AGAP3-220ENST00000486946 LMNB1P20700 586 aa16.3■□□□□ 0.2
AGAP3-220ENST00000486946 RASSF7Q02833 373 aa16.3■□□□□ 0.2
AGAP3-220ENST00000486946 RRS1Q15050 365 aaKnown RBP16.3■□□□□ 0.2
AGAP3-220ENST00000486946 KDM6AO15550 1401 aaPredicted RBP16.29■□□□□ 0.2
AGAP3-220ENST00000486946 CHRNA5P30532 468 aa16.29■□□□□ 0.2
AGAP3-220ENST00000486946 LBX1P52954 281 aa16.29■□□□□ 0.2
AGAP3-220ENST00000486946 CNTNAP1P78357 1384 aa16.28■□□□□ 0.2
AGAP3-220ENST00000486946 FYB1O15117 783 aa16.28■□□□□ 0.2
AGAP3-220ENST00000486946 SLC24A1O60721 1099 aa16.28■□□□□ 0.2
AGAP3-220ENST00000486946 GGNBP2Q9H3C7 697 aa16.28■□□□□ 0.2
AGAP3-220ENST00000486946 POTECB2RU33 542 aa16.27■□□□□ 0.2
AGAP3-220ENST00000486946 RC3H1Q5TC82 1133 aaKnown RBP16.27■□□□□ 0.2
AGAP3-220ENST00000486946 CHADLQ6NUI6 762 aa16.27■□□□□ 0.2
AGAP3-220ENST00000486946 ATG3Q9NT62 314 aa16.27■□□□□ 0.2
AGAP3-220ENST00000486946 RPS6KA4O75676 772 aa16.26■□□□□ 0.19
AGAP3-220ENST00000486946 RGS19P49795 217 aa16.25■□□□□ 0.19
AGAP3-220ENST00000486946 DPY19L2Q6NUT2 758 aa16.25■□□□□ 0.19
AGAP3-220ENST00000486946 WBP1LQ9NX94 342 aa16.25■□□□□ 0.19
AGAP3-220ENST00000486946 SPG7Q9UQ90 795 aa16.25■□□□□ 0.19
AGAP3-220ENST00000486946 CLSPNQ9HAW4 1339 aa16.24■□□□□ 0.19
AGAP3-220ENST00000486946 CCDC85CA6NKD9 419 aa16.24■□□□□ 0.19
AGAP3-220ENST00000486946 VEGFBP49765 207 aa16.24■□□□□ 0.19
AGAP3-220ENST00000486946 DDR1Q08345 913 aa16.24■□□□□ 0.19
AGAP3-220ENST00000486946 HSP90AB2PQ58FF8 381 aa16.24■□□□□ 0.19
AGAP3-220ENST00000486946 INSRP06213 1382 aa16.24■□□□□ 0.19
AGAP3-220ENST00000486946 CNTNAP4Q9C0A0 1308 aa16.23■□□□□ 0.19
AGAP3-220ENST00000486946 RBM42Q9BTD8 480 aaKnown RBP16.23■□□□□ 0.19
AGAP3-220ENST00000486946 KDRP35968 1356 aa16.23■□□□□ 0.19
AGAP3-220ENST00000486946 SLC4A9Q96Q91 983 aa16.22■□□□□ 0.19
AGAP3-220ENST00000486946 FLT4P35916 1363 aa16.22■□□□□ 0.19
AGAP3-220ENST00000486946 HSPA8P11142 646 aaKnown RBP16.21■□□□□ 0.19
AGAP3-220ENST00000486946 FKBP8Q14318 412 aa16.21■□□□□ 0.19
AGAP3-220ENST00000486946 TIAM2Q8IVF5 1701 aa16.2■□□□□ 0.18
AGAP3-220ENST00000486946 ANKRD26Q9UPS8 1709 aa16.2■□□□□ 0.18
AGAP3-220ENST00000486946 SRP68Q9UHB9 627 aaKnown RBP16.2■□□□□ 0.18
AGAP3-220ENST00000486946 KIF24Q5T7B8 1368 aa16.2■□□□□ 0.18
AGAP3-220ENST00000486946 POTEIP0CG38 1075 aa16.19■□□□□ 0.18
AGAP3-220ENST00000486946 POTEJP0CG39 1038 aa16.19■□□□□ 0.18
AGAP3-220ENST00000486946 IFNL2Q8IZJ0 200 aa16.19■□□□□ 0.18
AGAP3-220ENST00000486946 CCER1Q8TC90 406 aaPredicted RBP16.19■□□□□ 0.18
AGAP3-220ENST00000486946 USP42Q9H9J4 1324 aaKnown RBP16.19■□□□□ 0.18
AGAP3-220ENST00000486946 CCDC88AQ3V6T2 1871 aa16.18■□□□□ 0.18
AGAP3-220ENST00000486946 POLRMTO00411 1230 aaKnown RBP16.18■□□□□ 0.18
AGAP3-220ENST00000486946 CARD14Q9BXL6 1004 aa16.18■□□□□ 0.18
AGAP3-220ENST00000486946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.18■□□□□ 0.18
AGAP3-220ENST00000486946 PASKQ96RG2 1323 aa16.18■□□□□ 0.18
AGAP3-220ENST00000486946 ZNF831Q5JPB2 1677 aa16.18■□□□□ 0.18
AGAP3-220ENST00000486946 TMEM88BA6NKF7 163 aa16.17■□□□□ 0.18
AGAP3-220ENST00000486946 NFKBIEO00221 500 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms