RNA–Protein interactions for RNA: ENST00000486585.1

PCMT1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, human

TSL 3

Gene PCMT1, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCMT1-208	ENST00000486585	ADRA2B	P18089	450 aa		13.57	□□□□□ -0.24
PCMT1-208	ENST00000486585	TGFB2	P61812	414 aa		13.57	□□□□□ -0.24
PCMT1-208	ENST00000486585	TRAPPC3L	Q5T215	181 aa		13.57	□□□□□ -0.24
PCMT1-208	ENST00000486585	AMIGO3	Q86WK7	504 aa		13.57	□□□□□ -0.24
PCMT1-208	ENST00000486585	RTCB	Q9Y3I0	505 aa	Known RBP	13.57	□□□□□ -0.24
PCMT1-208	ENST00000486585	ERVV-2	B6SEH9	535 aa		13.56	□□□□□ -0.24
PCMT1-208	ENST00000486585	MMP10	P09238	476 aa		13.56	□□□□□ -0.24
PCMT1-208	ENST00000486585	ATG3	Q9NT62	314 aa		13.56	□□□□□ -0.24
PCMT1-208	ENST00000486585	POLK	Q9UBT6	870 aa		13.56	□□□□□ -0.24
PCMT1-208	ENST00000486585	ITPK1	Q13572	414 aa		13.55	□□□□□ -0.24
PCMT1-208	ENST00000486585	RC3H1	Q5TC82	1133 aa	Known RBP	13.55	□□□□□ -0.24
PCMT1-208	ENST00000486585	DCAF5	Q96JK2	942 aa		13.55	□□□□□ -0.24
PCMT1-208	ENST00000486585	CIC	Q96RK0	1608 aa	Predicted RBP	13.54	□□□□□ -0.24
PCMT1-208	ENST00000486585	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.54	□□□□□ -0.24
PCMT1-208	ENST00000486585	RFC4	P35249	363 aa		13.53	□□□□□ -0.24
PCMT1-208	ENST00000486585	EIF4A2	Q14240	407 aa	Known RBP	13.53	□□□□□ -0.24
PCMT1-208	ENST00000486585	AMOT	Q4VCS5	1084 aa		13.53	□□□□□ -0.24
PCMT1-208	ENST00000486585	SMIM5	Q71RC9	77 aa		13.53	□□□□□ -0.24
PCMT1-208	ENST00000486585	RBM42	Q9BTD8	480 aa	Known RBP	13.53	□□□□□ -0.24
PCMT1-208	ENST00000486585	CCDC87	Q9NVE4	849 aa		13.53	□□□□□ -0.24
PCMT1-208	ENST00000486585	WWC3	Q9ULE0	1092 aa		13.53	□□□□□ -0.24
PCMT1-208	ENST00000486585	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.53	□□□□□ -0.24
PCMT1-208	ENST00000486585	TRIM26	Q12899	539 aa	Predicted RBP	13.52	□□□□□ -0.25
PCMT1-208	ENST00000486585	PARP3	Q9Y6F1	533 aa		13.52	□□□□□ -0.25
PCMT1-208	ENST00000486585	CNTNAP4	Q9C0A0	1308 aa		13.52	□□□□□ -0.25
PCMT1-208	ENST00000486585	COL5A3	P25940	1745 aa	Predicted RBP	13.51	□□□□□ -0.25
PCMT1-208	ENST00000486585	PXDNL	A1KZ92	1463 aa		13.51	□□□□□ -0.25
PCMT1-208	ENST00000486585	KDR	P35968	1356 aa		13.51	□□□□□ -0.25
PCMT1-208	ENST00000486585	RPS6KA4	O75676	772 aa		13.51	□□□□□ -0.25
PCMT1-208	ENST00000486585	TNNT2	P45379	298 aa	Predicted RBP	13.51	□□□□□ -0.25
PCMT1-208	ENST00000486585	APLP1	P51693	650 aa		13.51	□□□□□ -0.25
PCMT1-208	ENST00000486585	CABP4	P57796	275 aa		13.51	□□□□□ -0.25
PCMT1-208	ENST00000486585	BCS1L	Q9Y276	419 aa		13.51	□□□□□ -0.25
PCMT1-208	ENST00000486585		A0A0G2JLW4	131 aa		13.5	□□□□□ -0.25
PCMT1-208	ENST00000486585	KIF3C	O14782	793 aa		13.5	□□□□□ -0.25
PCMT1-208	ENST00000486585	TOMM70	O94826	608 aa		13.5	□□□□□ -0.25
PCMT1-208	ENST00000486585	C1orf141	Q5JVX7	400 aa		13.5	□□□□□ -0.25
PCMT1-208	ENST00000486585	ARHGAP27	Q6ZUM4	889 aa		13.5	□□□□□ -0.25
PCMT1-208	ENST00000486585	ARHGEF1	Q92888	912 aa	Known RBP	13.5	□□□□□ -0.25
PCMT1-208	ENST00000486585	POLR3GL	Q9BT43	218 aa		13.5	□□□□□ -0.25
PCMT1-208	ENST00000486585	ARFGEF1	Q9Y6D6	1849 aa		13.5	□□□□□ -0.25
PCMT1-208	ENST00000486585	C4A	P0C0L4	1744 aa		13.5	□□□□□ -0.25
PCMT1-208	ENST00000486585	C10orf71	Q711Q0	1435 aa		13.49	□□□□□ -0.25
PCMT1-208	ENST00000486585	BRCA1	P38398	1863 aa	Known RBP	13.49	□□□□□ -0.25
PCMT1-208	ENST00000486585	CLSPN	Q9HAW4	1339 aa		13.49	□□□□□ -0.25
PCMT1-208	ENST00000486585	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.49	□□□□□ -0.25
PCMT1-208	ENST00000486585	KIAA1551	Q9HCM1	1747 aa		13.49	□□□□□ -0.25
PCMT1-208	ENST00000486585	MYH14	Q7Z406	1995 aa	Known RBP	13.49	□□□□□ -0.25
PCMT1-208	ENST00000486585	FCHSD2	O94868	740 aa		13.48	□□□□□ -0.25
PCMT1-208	ENST00000486585	GYS1	P13807	737 aa		13.48	□□□□□ -0.25
PCMT1-208	ENST00000486585	MTHFS	P49914	203 aa		13.48	□□□□□ -0.25
PCMT1-208	ENST00000486585	PIM2	Q9P1W9	311 aa		13.47	□□□□□ -0.25
PCMT1-208	ENST00000486585	DPEP1	P16444	411 aa		13.46	□□□□□ -0.25
PCMT1-208	ENST00000486585	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.46	□□□□□ -0.25
PCMT1-208	ENST00000486585	SLC4A9	Q96Q91	983 aa		13.46	□□□□□ -0.25
PCMT1-208	ENST00000486585	PTCD1	O75127	700 aa	Known RBP	13.45	□□□□□ -0.26
PCMT1-208	ENST00000486585	CRKL	P46109	303 aa	Known RBP	13.45	□□□□□ -0.26
PCMT1-208	ENST00000486585	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
PCMT1-208	ENST00000486585	KDM2B	Q8NHM5	1336 aa		13.44	□□□□□ -0.26
PCMT1-208	ENST00000486585	DALRD3	Q5D0E6	543 aa	Known RBP	13.44	□□□□□ -0.26
PCMT1-208	ENST00000486585	MORC1	Q86VD1	984 aa		13.44	□□□□□ -0.26
PCMT1-208	ENST00000486585	NFATC2IP	Q8NCF5	419 aa		13.44	□□□□□ -0.26
PCMT1-208	ENST00000486585	RBM46	Q8TBY0	533 aa	Known RBP	13.44	□□□□□ -0.26
PCMT1-208	ENST00000486585	PANK3	Q9H999	370 aa		13.44	□□□□□ -0.26
PCMT1-208	ENST00000486585	SCN11A	Q9UI33	1791 aa		13.44	□□□□□ -0.26
PCMT1-208	ENST00000486585	KDM6A	O15550	1401 aa	Predicted RBP	13.44	□□□□□ -0.26
PCMT1-208	ENST00000486585	USP42	Q9H9J4	1324 aa	Known RBP	13.43	□□□□□ -0.26
PCMT1-208	ENST00000486585	ZPR1	O75312	459 aa		13.43	□□□□□ -0.26
PCMT1-208	ENST00000486585	C9orf131	Q5VYM1	1079 aa		13.43	□□□□□ -0.26
PCMT1-208	ENST00000486585	KCNA3	P22001	575 aa		13.42	□□□□□ -0.26
PCMT1-208	ENST00000486585	FSTL1	Q12841	308 aa		13.42	□□□□□ -0.26
PCMT1-208	ENST00000486585	KNSTRN	Q9Y448	316 aa		13.42	□□□□□ -0.26
PCMT1-208	ENST00000486585	SBF1	O95248	1867 aa		13.42	□□□□□ -0.26
PCMT1-208	ENST00000486585	SULT6B1	Q6IMI4	303 aa		13.41	□□□□□ -0.26
PCMT1-208	ENST00000486585	NMRK2	Q9NPI5	230 aa		13.41	□□□□□ -0.26
PCMT1-208	ENST00000486585	TJP1	Q07157	1748 aa		13.4	□□□□□ -0.26
PCMT1-208	ENST00000486585	FKBP8	Q14318	412 aa		13.4	□□□□□ -0.26
PCMT1-208	ENST00000486585	AKAP4	Q5JQC9	854 aa		13.4	□□□□□ -0.26
PCMT1-208	ENST00000486585	DNAJC5G	Q8N7S2	189 aa		13.4	□□□□□ -0.26
PCMT1-208	ENST00000486585	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.4	□□□□□ -0.26
PCMT1-208	ENST00000486585	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.39	□□□□□ -0.27
PCMT1-208	ENST00000486585	WDR90	Q96KV7	1748 aa		13.39	□□□□□ -0.27
PCMT1-208	ENST00000486585	VIRMA	Q69YN4	1812 aa	Known RBP	13.39	□□□□□ -0.27
PCMT1-208	ENST00000486585	AEBP1	Q8IUX7	1158 aa		13.39	□□□□□ -0.27
PCMT1-208	ENST00000486585	SLC52A2	Q9HAB3	445 aa		13.39	□□□□□ -0.27
PCMT1-208	ENST00000486585	RNF181	Q9P0P0	153 aa		13.39	□□□□□ -0.27
PCMT1-208	ENST00000486585	SRP68	Q9UHB9	627 aa	Known RBP	13.39	□□□□□ -0.27
PCMT1-208	ENST00000486585	HSPA5	P11021	654 aa	Known RBP	13.38	□□□□□ -0.27
PCMT1-208	ENST00000486585	TM4SF1	P30408	202 aa		13.38	□□□□□ -0.27
PCMT1-208	ENST00000486585	DDR1	Q08345	913 aa		13.38	□□□□□ -0.27
PCMT1-208	ENST00000486585	INTS5	Q6P9B9	1019 aa	Known RBP	13.38	□□□□□ -0.27
PCMT1-208	ENST00000486585	POLRMT	O00411	1230 aa	Known RBP	13.37	□□□□□ -0.27
PCMT1-208	ENST00000486585	IL13	P35225	146 aa		13.37	□□□□□ -0.27
PCMT1-208	ENST00000486585	AFDN	P55196	1824 aa	Known RBP	13.36	□□□□□ -0.27
PCMT1-208	ENST00000486585	CHRNA5	P30532	468 aa		13.36	□□□□□ -0.27
PCMT1-208	ENST00000486585	USPL1	Q5W0Q7	1092 aa		13.36	□□□□□ -0.27
PCMT1-208	ENST00000486585	VSIG10	Q8N0Z9	540 aa		13.36	□□□□□ -0.27
PCMT1-208	ENST00000486585	PCGF6	Q9BYE7	350 aa		13.36	□□□□□ -0.27
PCMT1-208	ENST00000486585	NARF	Q9UHQ1	456 aa		13.36	□□□□□ -0.27
PCMT1-208	ENST00000486585	ADAMTS7	Q9UKP4	1686 aa		13.36	□□□□□ -0.27

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