RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 HSP90AB1P08238 724 aaKnown RBP13.94□□□□□ -0.18
SLX4-203ENST00000486524 TSHZ3Q63HK5 1081 aa13.94□□□□□ -0.18
SLX4-203ENST00000486524 ZNF530Q6P9A1 599 aaPredicted RBP13.94□□□□□ -0.18
SLX4-203ENST00000486524 KIF2CQ99661 725 aa13.94□□□□□ -0.18
SLX4-203ENST00000486524 KCNQ3O43525 872 aa13.94□□□□□ -0.18
SLX4-203ENST00000486524 PROSER2Q86WR7 435 aaPredicted RBP13.94□□□□□ -0.18
SLX4-203ENST00000486524 LRRC37A3O60309 1634 aa13.94□□□□□ -0.18
SLX4-203ENST00000486524 CD2BP2O95400 341 aaKnown RBP13.94□□□□□ -0.18
SLX4-203ENST00000486524 SDSP20132 328 aa13.94□□□□□ -0.18
SLX4-203ENST00000486524 NFAT5O94916 1531 aa13.94□□□□□ -0.18
SLX4-203ENST00000486524 ZNF142P52746 1687 aaPredicted RBP13.93□□□□□ -0.18
SLX4-203ENST00000486524 PNMA6EA0A0J9YXQ4 647 aa13.93□□□□□ -0.18
SLX4-203ENST00000486524 ANXA1P04083 346 aa13.93□□□□□ -0.18
SLX4-203ENST00000486524 LRRFIP2Q9Y608 721 aaKnown RBP13.93□□□□□ -0.18
SLX4-203ENST00000486524 RGPD2P0DJD1 1756 aa13.93□□□□□ -0.18
SLX4-203ENST00000486524 HSP90AA1P07900 732 aaKnown RBP13.92□□□□□ -0.18
SLX4-203ENST00000486524 TEFQ10587 303 aa13.92□□□□□ -0.18
SLX4-203ENST00000486524 CHMP5Q9NZZ3 219 aa13.92□□□□□ -0.18
SLX4-203ENST00000486524 USP54Q70EL1 1684 aa13.92□□□□□ -0.18
SLX4-203ENST00000486524 FAM208AQ9UK61 1670 aaKnown RBP13.92□□□□□ -0.18
SLX4-203ENST00000486524 BTBD11A6QL63 1104 aa13.91□□□□□ -0.18
SLX4-203ENST00000486524 GNAI3P08754 354 aa13.91□□□□□ -0.18
SLX4-203ENST00000486524 KRT28Q7Z3Y7 464 aa13.91□□□□□ -0.18
SLX4-203ENST00000486524 ANKRD24Q8TF21 1146 aa13.91□□□□□ -0.18
SLX4-203ENST00000486524 ZC3H6P61129 1189 aaKnown RBP13.91□□□□□ -0.18
SLX4-203ENST00000486524 CHPF2Q9P2E5 772 aa13.91□□□□□ -0.18
SLX4-203ENST00000486524 AXIN2Q9Y2T1 843 aa13.91□□□□□ -0.18
SLX4-203ENST00000486524 ADAMTSL3P82987 1691 aa13.9□□□□□ -0.18
SLX4-203ENST00000486524 EIF4A1P60842 406 aaKnown RBP13.9□□□□□ -0.18
SLX4-203ENST00000486524 ARHGEF25Q86VW2 580 aa13.9□□□□□ -0.18
SLX4-203ENST00000486524 DDX17Q92841 729 aaKnown RBP13.9□□□□□ -0.18
SLX4-203ENST00000486524 PLEKHO1Q53GL0 409 aaPredicted RBP13.9□□□□□ -0.18
SLX4-203ENST00000486524 SNX21Q969T3 373 aa13.9□□□□□ -0.18
SLX4-203ENST00000486524 CEMIPQ8WUJ3 1361 aa13.9□□□□□ -0.19
SLX4-203ENST00000486524 UBTFL1P0CB47 393 aaPredicted RBP13.89□□□□□ -0.19
SLX4-203ENST00000486524 C1orf141Q5JVX7 400 aa13.89□□□□□ -0.19
SLX4-203ENST00000486524 USP44Q9H0E7 712 aa13.89□□□□□ -0.19
SLX4-203ENST00000486524 CASC1Q6TDU7 716 aa13.89□□□□□ -0.19
SLX4-203ENST00000486524 BABAM1Q9NWV8 329 aa13.89□□□□□ -0.19
SLX4-203ENST00000486524 PDE1AP54750 535 aa13.89□□□□□ -0.19
SLX4-203ENST00000486524 AKAP4Q5JQC9 854 aa13.89□□□□□ -0.19
SLX4-203ENST00000486524 ARXQ96QS3 562 aa13.89□□□□□ -0.19
SLX4-203ENST00000486524 LRRCC1Q9C099 1032 aa13.89□□□□□ -0.19
SLX4-203ENST00000486524 IL27Q8NEV9 243 aa13.88□□□□□ -0.19
SLX4-203ENST00000486524 MCM4P33991 863 aa13.88□□□□□ -0.19
SLX4-203ENST00000486524 ATP8B2P98198 1209 aa13.88□□□□□ -0.19
SLX4-203ENST00000486524 GZF1Q9H116 711 aaPredicted RBP13.87□□□□□ -0.19
SLX4-203ENST00000486524 BRPF3Q9ULD4 1205 aa13.87□□□□□ -0.19
SLX4-203ENST00000486524 PXDNQ92626 1479 aa13.87□□□□□ -0.19
SLX4-203ENST00000486524 PI4KAP2A4QPH2 592 aa13.87□□□□□ -0.19
SLX4-203ENST00000486524 PI4KAP1Q8N8J0 262 aa13.87□□□□□ -0.19
SLX4-203ENST00000486524 USP26Q9BXU7 913 aa13.87□□□□□ -0.19
SLX4-203ENST00000486524 K7ELQ4 463 aaPredicted RBP13.87□□□□□ -0.19
SLX4-203ENST00000486524 SRCIN1Q9C0H9 1055 aa13.87□□□□□ -0.19
SLX4-203ENST00000486524 IL1RAPL2Q9NP60 686 aa13.87□□□□□ -0.19
SLX4-203ENST00000486524 SOS1Q07889 1333 aaPredicted RBP13.86□□□□□ -0.19
SLX4-203ENST00000486524 PRAMEF22A3QJZ6 481 aa13.86□□□□□ -0.19
SLX4-203ENST00000486524 RNMTO43148 476 aaKnown RBP13.86□□□□□ -0.19
SLX4-203ENST00000486524 RILPL2Q969X0 211 aa13.86□□□□□ -0.19
SLX4-203ENST00000486524 TRIM6-TRIM34B2RNG4 842 aa13.85□□□□□ -0.19
SLX4-203ENST00000486524 NBPF7P0C2Y1 421 aaPredicted RBP13.85□□□□□ -0.19
SLX4-203ENST00000486524 AMOTQ4VCS5 1084 aa13.85□□□□□ -0.19
SLX4-203ENST00000486524 MX1P20591 662 aa13.85□□□□□ -0.19
SLX4-203ENST00000486524 C19orf44Q9H6X5 657 aa13.85□□□□□ -0.19
SLX4-203ENST00000486524 PPP1R42Q7Z4L9 355 aa13.84□□□□□ -0.19
SLX4-203ENST00000486524 CACNA1FO60840 1977 aa13.84□□□□□ -0.19
SLX4-203ENST00000486524 NCOA3Q9Y6Q9 1424 aa13.84□□□□□ -0.19
SLX4-203ENST00000486524 CABLES1Q8TDN4 633 aa13.84□□□□□ -0.19
SLX4-203ENST00000486524 DNAAF4Q8WXU2 420 aa13.84□□□□□ -0.19
SLX4-203ENST00000486524 IBTKQ9P2D0 1353 aaPredicted RBP13.84□□□□□ -0.19
SLX4-203ENST00000486524 SURF6O75683 361 aaKnown RBP13.84□□□□□ -0.19
SLX4-203ENST00000486524 ATF3P18847 181 aa13.84□□□□□ -0.19
SLX4-203ENST00000486524 PROSER3Q2NL68 480 aa13.84□□□□□ -0.19
SLX4-203ENST00000486524 NUTM1Q86Y26 1132 aa13.84□□□□□ -0.19
SLX4-203ENST00000486524 NLRP2Q9NX02 1062 aa13.84□□□□□ -0.19
SLX4-203ENST00000486524 C1orf167Q5SNV9 1468 aa13.83□□□□□ -0.19
SLX4-203ENST00000486524 SRGAP3O43295 1099 aa13.83□□□□□ -0.2
SLX4-203ENST00000486524 DDIT3P35638 169 aa13.83□□□□□ -0.2
SLX4-203ENST00000486524 TNPO1Q92973 898 aaKnown RBP13.83□□□□□ -0.2
SLX4-203ENST00000486524 ERC2O15083 957 aa13.83□□□□□ -0.2
SLX4-203ENST00000486524 OSBPL3Q9H4L5 887 aa13.83□□□□□ -0.2
SLX4-203ENST00000486524 REC8O95072 547 aa13.82□□□□□ -0.2
SLX4-203ENST00000486524 RABEP1Q15276 862 aa13.82□□□□□ -0.2
SLX4-203ENST00000486524 MAP4K4O95819 1239 aaPredicted RBP13.82□□□□□ -0.2
SLX4-203ENST00000486524 BEND3Q5T5X7 828 aa13.82□□□□□ -0.2
SLX4-203ENST00000486524 SLIT3O75094 1523 aa13.81□□□□□ -0.2
SLX4-203ENST00000486524 AIMP1Q12904 312 aaKnown RBP13.81□□□□□ -0.2
SLX4-203ENST00000486524 PKNOX2Q96KN3 472 aa13.81□□□□□ -0.2
SLX4-203ENST00000486524 PXDNLA1KZ92 1463 aa13.81□□□□□ -0.2
SLX4-203ENST00000486524 ERBB3P21860 1342 aa13.81□□□□□ -0.2
SLX4-203ENST00000486524 MED1Q15648 1581 aaPredicted RBP13.81□□□□□ -0.2
SLX4-203ENST00000486524 RGPD5Q99666 1765 aa13.81□□□□□ -0.2
SLX4-203ENST00000486524 TRAK2O60296 914 aa13.81□□□□□ -0.2
SLX4-203ENST00000486524 HOXB7P09629 217 aa13.81□□□□□ -0.2
SLX4-203ENST00000486524 CSB-PGBD3P0DP91 1061 aa13.81□□□□□ -0.2
SLX4-203ENST00000486524 SLC39A6Q13433 755 aa13.81□□□□□ -0.2
SLX4-203ENST00000486524 UNC5CLQ8IV45 518 aa13.81□□□□□ -0.2
SLX4-203ENST00000486524 DBF4Q9UBU7 674 aaPredicted RBP13.81□□□□□ -0.2
SLX4-203ENST00000486524 MAP3K2Q9Y2U5 619 aa13.81□□□□□ -0.2
SLX4-203ENST00000486524 SALL3Q9BXA9 1300 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms