RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.56■■■□□ 2.48
SREBF1-214ENST00000486311 SSFA2P28290 1259 aa30.56■■■□□ 2.48
SREBF1-214ENST00000486311 IL13P35225 146 aa30.56■■■□□ 2.48
SREBF1-214ENST00000486311 ATP6V1AP38606 617 aa30.56■■■□□ 2.48
SREBF1-214ENST00000486311 PHF14O94880 888 aa30.55■■■□□ 2.48
SREBF1-214ENST00000486311 SULT6B1Q6IMI4 303 aa30.54■■■□□ 2.48
SREBF1-214ENST00000486311 KDRP35968 1356 aa30.54■■■□□ 2.48
SREBF1-214ENST00000486311 SMIM5Q71RC9 77 aa30.53■■■□□ 2.48
SREBF1-214ENST00000486311 KDM6AO15550 1401 aaPredicted RBP30.53■■■□□ 2.48
SREBF1-214ENST00000486311 GOLGB1Q14789 3259 aaKnown RBP30.53■■■□□ 2.48
SREBF1-214ENST00000486311 PER1O15534 1290 aaPredicted RBP30.52■■■□□ 2.48
SREBF1-214ENST00000486311 PELP1Q8IZL8 1130 aaKnown RBP30.51■■■□□ 2.47
SREBF1-214ENST00000486311 CD2APQ9Y5K6 639 aa30.51■■■□□ 2.47
SREBF1-214ENST00000486311 GNPATO15228 680 aa30.5■■■□□ 2.47
SREBF1-214ENST00000486311 MTHFSP49914 203 aa30.49■■■□□ 2.47
SREBF1-214ENST00000486311 CABP4P57796 275 aa30.49■■■□□ 2.47
SREBF1-214ENST00000486311 C1orf141Q5JVX7 400 aa30.49■■■□□ 2.47
SREBF1-214ENST00000486311 SLC4A9Q96Q91 983 aa30.49■■■□□ 2.47
SREBF1-214ENST00000486311 UBR3Q6ZT12 1888 aa30.48■■■□□ 2.47
SREBF1-214ENST00000486311 RBM42Q9BTD8 480 aaKnown RBP30.46■■■□□ 2.47
SREBF1-214ENST00000486311 YBX3P16989 372 aaKnown RBP eCLIP30.44■■■□□ 2.46
SREBF1-214ENST00000486311 GRIN3BO60391 1043 aa30.43■■■□□ 2.46
SREBF1-214ENST00000486311 CC2D1BQ5T0F9 858 aaKnown RBP30.43■■■□□ 2.46
SREBF1-214ENST00000486311 RC3H1Q5TC82 1133 aaKnown RBP30.42■■■□□ 2.46
SREBF1-214ENST00000486311 NFATC2IPQ8NCF5 419 aa30.41■■■□□ 2.46
SREBF1-214ENST00000486311 RTCBQ9Y3I0 505 aaKnown RBP30.41■■■□□ 2.46
SREBF1-214ENST00000486311 ZNF831Q5JPB2 1677 aa30.4■■■□□ 2.46
SREBF1-214ENST00000486311 AKAP4Q5JQC9 854 aa30.4■■■□□ 2.46
SREBF1-214ENST00000486311 CNTNAP4Q9C0A0 1308 aa30.4■■■□□ 2.46
SREBF1-214ENST00000486311 NPC1L1Q9UHC9 1359 aa30.4■■■□□ 2.46
SREBF1-214ENST00000486311 TRAPPC3LQ5T215 181 aa30.39■■■□□ 2.46
SREBF1-214ENST00000486311 ADRA2BP18089 450 aa30.38■■■□□ 2.45
SREBF1-214ENST00000486311 DIAPH1O60610 1272 aaKnown RBP30.37■■■□□ 2.45
SREBF1-214ENST00000486311 PTCD1O75127 700 aaKnown RBP30.36■■■□□ 2.45
SREBF1-214ENST00000486311 HMOX1P09601 288 aa30.36■■■□□ 2.45
SREBF1-214ENST00000486311 RPS6KA4O75676 772 aa30.35■■■□□ 2.45
SREBF1-214ENST00000486311 ARHGEF1Q92888 912 aaKnown RBP30.34■■■□□ 2.45
SREBF1-214ENST00000486311 MMP10P09238 476 aa30.33■■■□□ 2.45
SREBF1-214ENST00000486311 NLGN1Q8N2Q7 840 aa30.32■■■□□ 2.44
SREBF1-214ENST00000486311 SLC52A2Q9HAB3 445 aa30.32■■■□□ 2.44
SREBF1-214ENST00000486311 LGR6Q9HBX8 967 aa30.31■■■□□ 2.44
SREBF1-214ENST00000486311 C1QTNF8P60827 252 aa30.3■■■□□ 2.44
SREBF1-214ENST00000486311 COL5A3P25940 1745 aaPredicted RBP30.3■■■□□ 2.44
SREBF1-214ENST00000486311 RNMTO43148 476 aaKnown RBP30.29■■■□□ 2.44
SREBF1-214ENST00000486311 RFC4P35249 363 aa30.29■■■□□ 2.44
SREBF1-214ENST00000486311 MTHFSDQ2M296 383 aaKnown RBP30.29■■■□□ 2.44
SREBF1-214ENST00000486311 GYS1P13807 737 aa30.28■■■□□ 2.44
SREBF1-214ENST00000486311 CRKLP46109 303 aaKnown RBP30.28■■■□□ 2.44
SREBF1-214ENST00000486311 COL3A1P02461 1466 aaPredicted RBP30.27■■■□□ 2.44
SREBF1-214ENST00000486311 MRC1P22897 1456 aa30.26■■■□□ 2.44
SREBF1-214ENST00000486311 CNGB1Q14028 1251 aaPredicted RBP30.26■■■□□ 2.43
SREBF1-214ENST00000486311 SCN11AQ9UI33 1791 aa30.25■■■□□ 2.43
SREBF1-214ENST00000486311 CICQ96RK0 1608 aaPredicted RBP30.22■■■□□ 2.43
SREBF1-214ENST00000486311 INTS5Q6P9B9 1019 aaKnown RBP30.22■■■□□ 2.43
SREBF1-214ENST00000486311 U2SURPO15042 1029 aaKnown RBP30.21■■■□□ 2.43
SREBF1-214ENST00000486311 DNAJC10Q8IXB1 793 aa30.21■■■□□ 2.43
SREBF1-214ENST00000486311 WWC3Q9ULE0 1092 aa30.21■■■□□ 2.43
SREBF1-214ENST00000486311 MYH14Q7Z406 1995 aaKnown RBP30.21■■■□□ 2.43
SREBF1-214ENST00000486311 SENP3-EIF4A1A0A087X0R7 540 aa30.2■■■□□ 2.43
SREBF1-214ENST00000486311 GIGYF1O75420 1035 aaPredicted RBP30.2■■■□□ 2.43
SREBF1-214ENST00000486311 TGFB2P61812 414 aa30.2■■■□□ 2.43
SREBF1-214ENST00000486311 SLC39A6Q13433 755 aa30.2■■■□□ 2.43
SREBF1-214ENST00000486311 C10orf71Q711Q0 1435 aa30.2■■■□□ 2.42
SREBF1-214ENST00000486311 PXDNLA1KZ92 1463 aa30.19■■■□□ 2.42
SREBF1-214ENST00000486311 TJP1Q07157 1748 aa30.19■■■□□ 2.42
SREBF1-214ENST00000486311 CCDC87Q9NVE4 849 aa30.19■■■□□ 2.42
SREBF1-214ENST00000486311 PARP3Q9Y6F1 533 aa30.19■■■□□ 2.42
SREBF1-214ENST00000486311 USP42Q9H9J4 1324 aaKnown RBP30.19■■■□□ 2.42
SREBF1-214ENST00000486311 ADAMTS7Q9UKP4 1686 aa30.18■■■□□ 2.42
SREBF1-214ENST00000486311 SRP68Q9UHB9 627 aaKnown RBP30.18■■■□□ 2.42
SREBF1-214ENST00000486311 CYP19A1P11511 503 aaPredicted RBP30.16■■■□□ 2.42
SREBF1-214ENST00000486311 GAS2L2Q8NHY3 880 aa30.16■■■□□ 2.42
SREBF1-214ENST00000486311 KCPQ6ZWJ8 1503 aa30.16■■■□□ 2.42
SREBF1-214ENST00000486311 ATP10DQ9P241 1426 aa30.15■■■□□ 2.42
SREBF1-214ENST00000486311 FKBP8Q14318 412 aa30.15■■■□□ 2.42
SREBF1-214ENST00000486311 VSIG10Q8N0Z9 540 aa30.15■■■□□ 2.42
SREBF1-214ENST00000486311 C4AP0C0L4 1744 aa30.14■■■□□ 2.42
SREBF1-214ENST00000486311 SOS1Q07889 1333 aaPredicted RBP30.14■■■□□ 2.42
SREBF1-214ENST00000486311 ADCY9O60503 1353 aa30.14■■■□□ 2.41
SREBF1-214ENST00000486311 A0A0G2JLW4 131 aa30.13■■■□□ 2.41
SREBF1-214ENST00000486311 CFAP53Q96M91 514 aa30.13■■■□□ 2.41
SREBF1-214ENST00000486311 GNAT3A8MTJ3 354 aa30.12■■■□□ 2.41
SREBF1-214ENST00000486311 KIF13BQ9NQT8 1826 aa30.12■■■□□ 2.41
SREBF1-214ENST00000486311 DDR1Q08345 913 aa30.11■■■□□ 2.41
SREBF1-214ENST00000486311 IL17REQ8NFR9 667 aa30.11■■■□□ 2.41
SREBF1-214ENST00000486311 DPEP1P16444 411 aa30.1■■■□□ 2.41
SREBF1-214ENST00000486311 ZPR1O75312 459 aa30.09■■■□□ 2.41
SREBF1-214ENST00000486311 TTC5Q8N0Z6 440 aa30.09■■■□□ 2.41
SREBF1-214ENST00000486311 KIAA1551Q9HCM1 1747 aa30.09■■■□□ 2.41
SREBF1-214ENST00000486311 ZBTB1Q9Y2K1 713 aa30.09■■■□□ 2.41
SREBF1-214ENST00000486311 TEFQ10587 303 aa30.08■■■□□ 2.41
SREBF1-214ENST00000486311 RSPH6AQ9H0K4 717 aa30.08■■■□□ 2.41
SREBF1-214ENST00000486311 BCS1LQ9Y276 419 aa30.08■■■□□ 2.41
SREBF1-214ENST00000486311 PPP2R1AP30153 589 aa30.07■■■□□ 2.4
SREBF1-214ENST00000486311 TM4SF1P30408 202 aa30.07■■■□□ 2.4
SREBF1-214ENST00000486311 USPL1Q5W0Q7 1092 aa30.07■■■□□ 2.4
SREBF1-214ENST00000486311 NUDCQ9Y266 331 aa30.07■■■□□ 2.4
SREBF1-214ENST00000486311 PRKAR2BP31323 418 aa30.06■■■□□ 2.4
SREBF1-214ENST00000486311 PHACTR3Q96KR7 559 aa30.06■■■□□ 2.4
SREBF1-214ENST00000486311 NARFQ9UHQ1 456 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms