RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 ERBB4Q15303 1308 aa21.56■■□□□ 1.04
TNXB-205ENST00000486148 HOXC9P31274 260 aa21.55■■□□□ 1.04
TNXB-205ENST00000486148 GNAT3A8MTJ3 354 aa21.55■■□□□ 1.04
TNXB-205ENST00000486148 CLEC17AQ6ZS10 378 aa21.55■■□□□ 1.04
TNXB-205ENST00000486148 HTATSF1O43719 755 aaKnown RBP21.54■■□□□ 1.04
TNXB-205ENST00000486148 FKBP5Q13451 457 aaPredicted RBP21.54■■□□□ 1.04
TNXB-205ENST00000486148 TSHZ3Q63HK5 1081 aa21.54■■□□□ 1.04
TNXB-205ENST00000486148 FAM208AQ9UK61 1670 aaKnown RBP21.54■■□□□ 1.04
TNXB-205ENST00000486148 NWD1Q149M9 1564 aa21.54■■□□□ 1.04
TNXB-205ENST00000486148 BAG4O95429 457 aaKnown RBP21.53■■□□□ 1.04
TNXB-205ENST00000486148 PTMSP20962 102 aa21.53■■□□□ 1.04
TNXB-205ENST00000486148 ERC2O15083 957 aa21.53■■□□□ 1.04
TNXB-205ENST00000486148 REC8O95072 547 aa21.53■■□□□ 1.04
TNXB-205ENST00000486148 CCDC30Q5VVM6 783 aa21.53■■□□□ 1.04
TNXB-205ENST00000486148 IL17REQ8NFR9 667 aa21.53■■□□□ 1.04
TNXB-205ENST00000486148 ISY1Q9ULR0 285 aaKnown RBP21.53■■□□□ 1.04
TNXB-205ENST00000486148 MARF1Q9Y4F3 1742 aaKnown RBP21.53■■□□□ 1.04
TNXB-205ENST00000486148 PNMA6EA0A0J9YXQ4 647 aa21.52■■□□□ 1.04
TNXB-205ENST00000486148 XRN1Q8IZH2 1706 aaKnown RBP21.52■■□□□ 1.04
TNXB-205ENST00000486148 LTV1Q96GA3 475 aaPredicted RBP21.52■■□□□ 1.04
TNXB-205ENST00000486148 SALL3Q9BXA9 1300 aa21.52■■□□□ 1.04
TNXB-205ENST00000486148 PKP1Q13835 747 aa21.51■■□□□ 1.03
TNXB-205ENST00000486148 KCNA6P17658 529 aa21.5■■□□□ 1.03
TNXB-205ENST00000486148 MAP3K5Q99683 1374 aa21.5■■□□□ 1.03
TNXB-205ENST00000486148 ESPNB1AK53 854 aa21.5■■□□□ 1.03
TNXB-205ENST00000486148 ST18O60284 1047 aa21.5■■□□□ 1.03
TNXB-205ENST00000486148 CYP2E1P05181 493 aaPredicted RBP21.5■■□□□ 1.03
TNXB-205ENST00000486148 GNAI3P08754 354 aa21.5■■□□□ 1.03
TNXB-205ENST00000486148 GOLGA6L22H0YM25 854 aa21.49■■□□□ 1.03
TNXB-205ENST00000486148 ZGPATQ8N5A5 531 aaKnown RBP21.49■■□□□ 1.03
TNXB-205ENST00000486148 LRRCC1Q9C099 1032 aa21.49■■□□□ 1.03
TNXB-205ENST00000486148 ATP8B2P98198 1209 aa21.49■■□□□ 1.03
TNXB-205ENST00000486148 THEMISQ8N1K5 641 aaPredicted RBP21.49■■□□□ 1.03
TNXB-205ENST00000486148 ANKARQ7Z5J8 1434 aa21.49■■□□□ 1.03
TNXB-205ENST00000486148 ABTB2Q8N961 1025 aa21.48■■□□□ 1.03
TNXB-205ENST00000486148 NUCB2P80303 420 aa21.48■■□□□ 1.03
TNXB-205ENST00000486148 USHBP1Q8N6Y0 703 aa21.48■■□□□ 1.03
TNXB-205ENST00000486148 LRRFIP2Q9Y608 721 aaKnown RBP21.48■■□□□ 1.03
TNXB-205ENST00000486148 TUBGCP6Q96RT7 1819 aa21.47■■□□□ 1.03
TNXB-205ENST00000486148 TAF7Q15545 349 aaPredicted RBP21.47■■□□□ 1.03
TNXB-205ENST00000486148 MX1P20591 662 aa21.47■■□□□ 1.03
TNXB-205ENST00000486148 PODXL2Q9NZ53 605 aa21.46■■□□□ 1.03
TNXB-205ENST00000486148 DDX49Q9Y6V7 483 aaKnown RBP21.46■■□□□ 1.03
TNXB-205ENST00000486148 IBTKQ9P2D0 1353 aaPredicted RBP21.46■■□□□ 1.03
TNXB-205ENST00000486148 KLHL40Q2TBA0 621 aa21.46■■□□□ 1.03
TNXB-205ENST00000486148 MCTP1Q6DN14 999 aa21.46■■□□□ 1.03
TNXB-205ENST00000486148 USP44Q9H0E7 712 aa21.45■■□□□ 1.02
TNXB-205ENST00000486148 ESYT1Q9BSJ8 1104 aa21.45■■□□□ 1.02
TNXB-205ENST00000486148 CWC22Q9HCG8 908 aaKnown RBP21.45■■□□□ 1.02
TNXB-205ENST00000486148 PHAXQ9H814 394 aaKnown RBP21.44■■□□□ 1.02
TNXB-205ENST00000486148 USP54Q70EL1 1684 aa21.43■■□□□ 1.02
TNXB-205ENST00000486148 CACNA1FO60840 1977 aa21.43■■□□□ 1.02
TNXB-205ENST00000486148 C14orf37Q86TY3 774 aa21.43■■□□□ 1.02
TNXB-205ENST00000486148 ZDHHC9Q9Y397 364 aa21.43■■□□□ 1.02
TNXB-205ENST00000486148 FER1L4A9Z1Z3 1794 aa21.43■■□□□ 1.02
TNXB-205ENST00000486148 N4BP2Q86UW6 1770 aaPredicted RBP21.43■■□□□ 1.02
TNXB-205ENST00000486148 PLEKHG5O94827 1062 aa21.42■■□□□ 1.02
TNXB-205ENST00000486148 HDGFL1Q5TGJ6 251 aa21.42■■□□□ 1.02
TNXB-205ENST00000486148 BABAM1Q9NWV8 329 aa21.42■■□□□ 1.02
TNXB-205ENST00000486148 SOS1Q07889 1333 aaPredicted RBP21.42■■□□□ 1.02
TNXB-205ENST00000486148 RILPL2Q969X0 211 aa21.42■■□□□ 1.02
TNXB-205ENST00000486148 TRIM6-TRIM34B2RNG4 842 aa21.42■■□□□ 1.02
TNXB-205ENST00000486148 CHMLP26374 656 aa21.42■■□□□ 1.02
TNXB-205ENST00000486148 NEK4P51957 841 aa21.42■■□□□ 1.02
TNXB-205ENST00000486148 LMBRD1Q9NUN5 540 aa21.42■■□□□ 1.02
TNXB-205ENST00000486148 PALD1Q9ULE6 856 aa21.42■■□□□ 1.02
TNXB-205ENST00000486148 PXDNLA1KZ92 1463 aa21.41■■□□□ 1.02
TNXB-205ENST00000486148 UNC5CLQ8IV45 518 aa21.41■■□□□ 1.02
TNXB-205ENST00000486148 STAP2Q9UGK3 403 aa21.41■■□□□ 1.02
TNXB-205ENST00000486148 UBTFL1P0CB47 393 aaPredicted RBP21.41■■□□□ 1.02
TNXB-205ENST00000486148 PDCL3Q9H2J4 239 aa21.4■■□□□ 1.02
TNXB-205ENST00000486148 TPM2P07951 284 aa21.39■■□□□ 1.01
TNXB-205ENST00000486148 IL1RAPL2Q9NP60 686 aa21.39■■□□□ 1.01
TNXB-205ENST00000486148 TMX3Q96JJ7 454 aa21.39■■□□□ 1.01
TNXB-205ENST00000486148 LTN1O94822 1766 aa21.38■■□□□ 1.01
TNXB-205ENST00000486148 SSH3Q8TE77 659 aa21.38■■□□□ 1.01
TNXB-205ENST00000486148 CHAMP1Q96JM3 812 aa21.38■■□□□ 1.01
TNXB-205ENST00000486148 ANO2Q9NQ90 1003 aa21.38■■□□□ 1.01
TNXB-205ENST00000486148 LGR6Q9HBX8 967 aa21.38■■□□□ 1.01
TNXB-205ENST00000486148 CEMIPQ8WUJ3 1361 aa21.37■■□□□ 1.01
TNXB-205ENST00000486148 EIF2S2P20042 333 aaKnown RBP21.37■■□□□ 1.01
TNXB-205ENST00000486148 NBPF6Q5VWK0 638 aa21.37■■□□□ 1.01
TNXB-205ENST00000486148 NBPF4Q96M43 638 aa21.37■■□□□ 1.01
TNXB-205ENST00000486148 PHF8Q9UPP1 1060 aa21.37■■□□□ 1.01
TNXB-205ENST00000486148 NCLP19338 710 aaKnown RBP21.37■■□□□ 1.01
TNXB-205ENST00000486148 SRCIN1Q9C0H9 1055 aa21.37■■□□□ 1.01
TNXB-205ENST00000486148 CAVIN1Q6NZI2 390 aaKnown RBP21.36■■□□□ 1.01
TNXB-205ENST00000486148 NUTM1Q86Y26 1132 aa21.36■■□□□ 1.01
TNXB-205ENST00000486148 RBM33Q96EV2 1170 aaKnown RBP21.36■■□□□ 1.01
TNXB-205ENST00000486148 PPP1R42Q7Z4L9 355 aa21.36■■□□□ 1.01
TNXB-205ENST00000486148 IP6K1Q92551 441 aa21.36■■□□□ 1.01
TNXB-205ENST00000486148 IL25Q9H293 177 aa21.36■■□□□ 1.01
TNXB-205ENST00000486148 PRPF40AO75400 957 aaKnown RBP21.35■■□□□ 1.01
TNXB-205ENST00000486148 MCCP23508 829 aa21.35■■□□□ 1.01
TNXB-205ENST00000486148 EIF4A1P60842 406 aaKnown RBP21.35■■□□□ 1.01
TNXB-205ENST00000486148 SETD1BQ9UPS6 1966 aaKnown RBP21.34■■□□□ 1.01
TNXB-205ENST00000486148 KCNQ3O43525 872 aa21.34■■□□□ 1.01
TNXB-205ENST00000486148 NASPP49321 788 aaPredicted RBP21.34■■□□□ 1.01
TNXB-205ENST00000486148 ZSCAN23Q3MJ62 389 aa21.34■■□□□ 1.01
TNXB-205ENST00000486148 FOXD4L5Q5VV16 416 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms