RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 IFNL2Q8IZJ0 200 aa16.2■□□□□ 0.18
HLA-DOA-204ENST00000485901 EYA1Q99502 592 aa16.2■□□□□ 0.18
HLA-DOA-204ENST00000485901 GPBP1L1Q9HC44 474 aaPredicted RBP16.2■□□□□ 0.18
HLA-DOA-204ENST00000485901 ZNF831Q5JPB2 1677 aa16.2■□□□□ 0.18
HLA-DOA-204ENST00000485901 ATP10DQ9P241 1426 aa16.19■□□□□ 0.18
HLA-DOA-204ENST00000485901 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.19■□□□□ 0.18
HLA-DOA-204ENST00000485901 MSL1Q68DK7 614 aa16.19■□□□□ 0.18
HLA-DOA-204ENST00000485901 TMOD3Q9NYL9 352 aa16.18■□□□□ 0.18
HLA-DOA-204ENST00000485901 DDX10Q13206 875 aaKnown RBP16.17■□□□□ 0.18
HLA-DOA-204ENST00000485901 ERVV-2B6SEH9 535 aa16.16■□□□□ 0.18
HLA-DOA-204ENST00000485901 HSP90AB1P08238 724 aaKnown RBP16.16■□□□□ 0.18
HLA-DOA-204ENST00000485901 ADRA2BP18089 450 aa16.16■□□□□ 0.18
HLA-DOA-204ENST00000485901 IFFO2Q5TF58 517 aa16.16■□□□□ 0.18
HLA-DOA-204ENST00000485901 KIF13BQ9NQT8 1826 aa16.16■□□□□ 0.18
HLA-DOA-204ENST00000485901 IGSF1Q8N6C5 1336 aa16.16■□□□□ 0.18
HLA-DOA-204ENST00000485901 PHKG2P15735 406 aa16.15■□□□□ 0.18
HLA-DOA-204ENST00000485901 IL13P35225 146 aa16.15■□□□□ 0.18
HLA-DOA-204ENST00000485901 TGFB2P61812 414 aa16.15■□□□□ 0.18
HLA-DOA-204ENST00000485901 RC3H1Q5TC82 1133 aaKnown RBP16.15■□□□□ 0.18
HLA-DOA-204ENST00000485901 NLGN1Q8N2Q7 840 aa16.15■□□□□ 0.18
HLA-DOA-204ENST00000485901 HSPA6P17066 643 aa16.14■□□□□ 0.17
HLA-DOA-204ENST00000485901 ATP6V1AP38606 617 aa16.14■□□□□ 0.17
HLA-DOA-204ENST00000485901 LINC00116Q8NCU8 138 aa16.14■□□□□ 0.17
HLA-DOA-204ENST00000485901 CICQ96RK0 1608 aaPredicted RBP16.14■□□□□ 0.17
HLA-DOA-204ENST00000485901 DIAPH1O60610 1272 aaKnown RBP16.13■□□□□ 0.17
HLA-DOA-204ENST00000485901 PHF14O94880 888 aa16.12■□□□□ 0.17
HLA-DOA-204ENST00000485901 TRAPPC3LQ5T215 181 aa16.12■□□□□ 0.17
HLA-DOA-204ENST00000485901 AMIGO3Q86WK7 504 aa16.12■□□□□ 0.17
HLA-DOA-204ENST00000485901 DCAF5Q96JK2 942 aa16.12■□□□□ 0.17
HLA-DOA-204ENST00000485901 ATG3Q9NT62 314 aa16.12■□□□□ 0.17
HLA-DOA-204ENST00000485901 ASAP1Q9ULH1 1129 aa16.12■□□□□ 0.17
HLA-DOA-204ENST00000485901 RTCBQ9Y3I0 505 aaKnown RBP16.12■□□□□ 0.17
HLA-DOA-204ENST00000485901 GNPATO15228 680 aa16.11■□□□□ 0.17
HLA-DOA-204ENST00000485901 PPP2R1AP30153 589 aa16.11■□□□□ 0.17
HLA-DOA-204ENST00000485901 AMOTQ4VCS5 1084 aa16.11■□□□□ 0.17
HLA-DOA-204ENST00000485901 CFAP53Q96M91 514 aa16.11■□□□□ 0.17
HLA-DOA-204ENST00000485901 ITPK1Q13572 414 aa16.1■□□□□ 0.17
HLA-DOA-204ENST00000485901 SULT6B1Q6IMI4 303 aa16.1■□□□□ 0.17
HLA-DOA-204ENST00000485901 CNTNAP4Q9C0A0 1308 aa16.1■□□□□ 0.17
HLA-DOA-204ENST00000485901 KDRP35968 1356 aa16.1■□□□□ 0.17
HLA-DOA-204ENST00000485901 ZNF316A6NFI3 1004 aaPredicted RBP16.09■□□□□ 0.17
HLA-DOA-204ENST00000485901 RPS6KA4O75676 772 aa16.08■□□□□ 0.16
HLA-DOA-204ENST00000485901 MMP10P09238 476 aa16.08■□□□□ 0.16
HLA-DOA-204ENST00000485901 RALBP1Q15311 655 aa16.08■□□□□ 0.16
HLA-DOA-204ENST00000485901 PLEKHO1Q53GL0 409 aaPredicted RBP16.08■□□□□ 0.16
HLA-DOA-204ENST00000485901 CCDC87Q9NVE4 849 aa16.07■□□□□ 0.16
HLA-DOA-204ENST00000485901 COL5A3P25940 1745 aaPredicted RBP16.07■□□□□ 0.16
HLA-DOA-204ENST00000485901 PXDNLA1KZ92 1463 aa16.06■□□□□ 0.16
HLA-DOA-204ENST00000485901 KIF3CO14782 793 aa16.06■□□□□ 0.16
HLA-DOA-204ENST00000485901 AEBP1Q8IUX7 1158 aa16.06■□□□□ 0.16
HLA-DOA-204ENST00000485901 NUDCQ9Y266 331 aa16.06■□□□□ 0.16
HLA-DOA-204ENST00000485901 BRCA1P38398 1863 aaKnown RBP16.05■□□□□ 0.16
HLA-DOA-204ENST00000485901 KIAA1551Q9HCM1 1747 aa16.05■□□□□ 0.16
HLA-DOA-204ENST00000485901 C10orf71Q711Q0 1435 aa16.05■□□□□ 0.16
HLA-DOA-204ENST00000485901 U2SURPO15042 1029 aaKnown RBP16.05■□□□□ 0.16
HLA-DOA-204ENST00000485901 TOMM70O94826 608 aa16.05■□□□□ 0.16
HLA-DOA-204ENST00000485901 RFC4P35249 363 aa16.05■□□□□ 0.16
HLA-DOA-204ENST00000485901 ARFGEF1Q9Y6D6 1849 aa16.05■□□□□ 0.16
HLA-DOA-204ENST00000485901 MYH14Q7Z406 1995 aaKnown RBP16.04■□□□□ 0.16
HLA-DOA-204ENST00000485901 HMOX1P09601 288 aa16.04■□□□□ 0.16
HLA-DOA-204ENST00000485901 APLP1P51693 650 aa16.04■□□□□ 0.16
HLA-DOA-204ENST00000485901 ARHGEF1Q92888 912 aaKnown RBP16.04■□□□□ 0.16
HLA-DOA-204ENST00000485901 PARP3Q9Y6F1 533 aa16.04■□□□□ 0.16
HLA-DOA-204ENST00000485901 C4AP0C0L4 1744 aa16.03■□□□□ 0.16
HLA-DOA-204ENST00000485901 GYS1P13807 737 aa16.03■□□□□ 0.16
HLA-DOA-204ENST00000485901 CABP4P57796 275 aa16.03■□□□□ 0.16
HLA-DOA-204ENST00000485901 SLC4A9Q96Q91 983 aa16.03■□□□□ 0.16
HLA-DOA-204ENST00000485901 RBM42Q9BTD8 480 aaKnown RBP16.02■□□□□ 0.16
HLA-DOA-204ENST00000485901 N4BP2Q86UW6 1770 aaPredicted RBP16.02■□□□□ 0.15
HLA-DOA-204ENST00000485901 C1orf141Q5JVX7 400 aa16.01■□□□□ 0.15
HLA-DOA-204ENST00000485901 ZNF530Q6P9A1 599 aaPredicted RBP16.01■□□□□ 0.15
HLA-DOA-204ENST00000485901 SMIM5Q71RC9 77 aa16.01■□□□□ 0.15
HLA-DOA-204ENST00000485901 ZNF526Q8TF50 670 aaPredicted RBP16.01■□□□□ 0.15
HLA-DOA-204ENST00000485901 BCS1LQ9Y276 419 aa16.01■□□□□ 0.15
HLA-DOA-204ENST00000485901 COL3A1P02461 1466 aaPredicted RBP16.01■□□□□ 0.15
HLA-DOA-204ENST00000485901 PIM2Q9P1W9 311 aa16■□□□□ 0.15
HLA-DOA-204ENST00000485901 A0A0G2JLW4 131 aa15.99■□□□□ 0.15
HLA-DOA-204ENST00000485901 U2AF1L5P0DN76 240 aaPredicted RBP15.99■□□□□ 0.15
HLA-DOA-204ENST00000485901 U2AF1Q01081 240 aaKnown RBP eCLIP15.99■□□□□ 0.15
HLA-DOA-204ENST00000485901 KDM6AO15550 1401 aaPredicted RBP15.99■□□□□ 0.15
HLA-DOA-204ENST00000485901 FCHSD2O94868 740 aa15.98■□□□□ 0.15
HLA-DOA-204ENST00000485901 DPEP1P16444 411 aa15.98■□□□□ 0.15
HLA-DOA-204ENST00000485901 KCNA3P22001 575 aa15.98■□□□□ 0.15
HLA-DOA-204ENST00000485901 ARHGAP27Q6ZUM4 889 aa15.98■□□□□ 0.15
HLA-DOA-204ENST00000485901 RBM46Q8TBY0 533 aaKnown RBP15.98■□□□□ 0.15
HLA-DOA-204ENST00000485901 MYBBP1AQ9BQG0 1328 aaKnown RBP15.97■□□□□ 0.15
HLA-DOA-204ENST00000485901 ZC3H4Q9UPT8 1303 aaKnown RBP15.97■□□□□ 0.15
HLA-DOA-204ENST00000485901 AKAP4Q5JQC9 854 aa15.97■□□□□ 0.15
HLA-DOA-204ENST00000485901 SCN11AQ9UI33 1791 aa15.97■□□□□ 0.15
HLA-DOA-204ENST00000485901 USP42Q9H9J4 1324 aaKnown RBP15.96■□□□□ 0.15
HLA-DOA-204ENST00000485901 CRKLP46109 303 aaKnown RBP15.96■□□□□ 0.15
HLA-DOA-204ENST00000485901 FSTL1Q12841 308 aa15.96■□□□□ 0.15
HLA-DOA-204ENST00000485901 MTHFSDQ2M296 383 aaKnown RBP15.96■□□□□ 0.15
HLA-DOA-204ENST00000485901 NFATC2IPQ8NCF5 419 aa15.96■□□□□ 0.15
HLA-DOA-204ENST00000485901 PRKRIP1Q9H875 184 aaPredicted RBP15.96■□□□□ 0.15
HLA-DOA-204ENST00000485901 KDM2BQ8NHM5 1336 aa15.95■□□□□ 0.14
HLA-DOA-204ENST00000485901 DALRD3Q5D0E6 543 aaKnown RBP15.95■□□□□ 0.14
HLA-DOA-204ENST00000485901 DNAJC5GQ8N7S2 189 aa15.95■□□□□ 0.14
HLA-DOA-204ENST00000485901 SBF1O95248 1867 aa15.95■□□□□ 0.14
HLA-DOA-204ENST00000485901 TM4SF1P30408 202 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms