RNA–Protein interactions for RNA: ENST00000485497.2

SENP6-209, Transcript of SUMO specific peptidase 6, humanhuman

TSL 4

Gene SENP6, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-209ENST00000485497 KRT76Q01546 638 aa10.31□□□□□ -0.76
SENP6-209ENST00000485497 NCOA4Q13772 614 aa10.31□□□□□ -0.76
SENP6-209ENST00000485497 RIPOR1Q6ZS17 1223 aa10.31□□□□□ -0.76
SENP6-209ENST00000485497 GAS2L1Q99501 681 aaPredicted RBP10.31□□□□□ -0.76
SENP6-209ENST00000485497 A6NJR5 290 aa10.3□□□□□ -0.76
SENP6-209ENST00000485497 H7C1W4 665 aa10.3□□□□□ -0.76
SENP6-209ENST00000485497 ZNF837Q96EG3 531 aaPredicted RBP10.3□□□□□ -0.76
SENP6-209ENST00000485497 CNTNAP3BQ96NU0 1288 aa10.3□□□□□ -0.76
SENP6-209ENST00000485497 CNTNAP3Q9BZ76 1288 aa10.3□□□□□ -0.76
SENP6-209ENST00000485497 PCDHGA11Q9Y5H2 935 aa10.3□□□□□ -0.76
SENP6-209ENST00000485497 F11P03951 625 aa10.29□□□□□ -0.76
SENP6-209ENST00000485497 PPARGC1BQ86YN6 1023 aaKnown RBP10.29□□□□□ -0.76
SENP6-209ENST00000485497 RHBDD1Q8TEB9 315 aa10.29□□□□□ -0.76
SENP6-209ENST00000485497 UCN2Q96RP3 112 aa10.29□□□□□ -0.76
SENP6-209ENST00000485497 A0A1B0GTH6 734 aa10.28□□□□□ -0.76
SENP6-209ENST00000485497 GTF2IP78347 998 aa10.28□□□□□ -0.76
SENP6-209ENST00000485497 C4orf17Q53FE4 359 aa10.28□□□□□ -0.76
SENP6-209ENST00000485497 RNFT1Q5M7Z0 435 aa10.28□□□□□ -0.76
SENP6-209ENST00000485497 PLEKHM2Q8IWE5 1019 aa10.28□□□□□ -0.76
SENP6-209ENST00000485497 DEPDC4Q8N2C3 294 aa10.28□□□□□ -0.76
SENP6-209ENST00000485497 GLMNQ92990 594 aa10.28□□□□□ -0.76
SENP6-209ENST00000485497 TMEM229AB2RXF0 380 aa10.27□□□□□ -0.77
SENP6-209ENST00000485497 ATP9BO43861 1147 aa10.27□□□□□ -0.77
SENP6-209ENST00000485497 PHKA2P46019 1235 aa10.27□□□□□ -0.77
SENP6-209ENST00000485497 SMTNP53814 917 aa10.27□□□□□ -0.77
SENP6-209ENST00000485497 FOXR1Q6PIV2 292 aa10.27□□□□□ -0.77
SENP6-209ENST00000485497 TBC1D9Q6ZT07 1266 aa10.27□□□□□ -0.77
SENP6-209ENST00000485497 USP17L3A6NCW0 530 aa10.26□□□□□ -0.77
SENP6-209ENST00000485497 USP17L4A6NCW7 530 aa10.26□□□□□ -0.77
SENP6-209ENST00000485497 DBN1Q16643 649 aa10.26□□□□□ -0.77
SENP6-209ENST00000485497 USP17L2Q6R6M4 530 aa10.26□□□□□ -0.77
SENP6-209ENST00000485497 USP17L1Q7RTZ2 530 aa10.26□□□□□ -0.77
SENP6-209ENST00000485497 TRIM50Q86XT4 487 aa10.26□□□□□ -0.77
SENP6-209ENST00000485497 SLC4A9Q96Q91 983 aa10.26□□□□□ -0.77
SENP6-209ENST00000485497 PSME1Q06323 249 aa10.25□□□□□ -0.77
SENP6-209ENST00000485497 SERTAD1Q9UHV2 236 aa10.25□□□□□ -0.77
SENP6-209ENST00000485497 BACH1O14867 736 aa10.24□□□□□ -0.77
SENP6-209ENST00000485497 NUCKS1Q9H1E3 243 aaKnown RBP10.24□□□□□ -0.77
SENP6-209ENST00000485497 GPAMQ9HCL2 828 aa10.24□□□□□ -0.77
SENP6-209ENST00000485497 ATP1A2P50993 1020 aa10.23□□□□□ -0.77
SENP6-209ENST00000485497 GAS6Q14393 721 aa10.23□□□□□ -0.77
SENP6-209ENST00000485497 MTFR1Q15390 333 aa10.23□□□□□ -0.77
SENP6-209ENST00000485497 GTPBP3Q969Y2 492 aaKnown RBP10.23□□□□□ -0.77
SENP6-209ENST00000485497 TRERF1Q96PN7 1200 aa10.23□□□□□ -0.77
SENP6-209ENST00000485497 NIFKQ9BYG3 293 aaKnown RBP10.23□□□□□ -0.77
SENP6-209ENST00000485497 A6NJY4 79 aa10.22□□□□□ -0.77
SENP6-209ENST00000485497 LBRQ14739 615 aaKnown RBP10.22□□□□□ -0.77
SENP6-209ENST00000485497 GPR25O00155 361 aa10.21□□□□□ -0.77
SENP6-209ENST00000485497 CDK2AP1O14519 115 aa10.21□□□□□ -0.77
SENP6-209ENST00000485497 SLURP2P0DP57 97 aa10.21□□□□□ -0.77
SENP6-209ENST00000485497 CSB-PGBD3P0DP91 1061 aa10.21□□□□□ -0.77
SENP6-209ENST00000485497 MSX1P28360 303 aa10.21□□□□□ -0.77
SENP6-209ENST00000485497 PLA2G4AP47712 749 aa10.21□□□□□ -0.77
SENP6-209ENST00000485497 PGBD3Q8N328 593 aa10.21□□□□□ -0.77
SENP6-209ENST00000485497 CALR3Q96L12 384 aaKnown RBP10.21□□□□□ -0.77
SENP6-209ENST00000485497 ZNF358Q9NW07 568 aa10.21□□□□□ -0.77
SENP6-209ENST00000485497 SRSF11Q05519 484 aaKnown RBP10.2□□□□□ -0.78
SENP6-209ENST00000485497 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.2□□□□□ -0.78
SENP6-209ENST00000485497 IQSEC3Q9UPP2 1182 aaPredicted RBP10.2□□□□□ -0.78
SENP6-209ENST00000485497 MBIPQ9NS73 344 aa10.19□□□□□ -0.78
SENP6-209ENST00000485497 MKRN1Q9UHC7 482 aaKnown RBP10.19□□□□□ -0.78
SENP6-209ENST00000485497 ADAMTS2O95450 1211 aa10.18□□□□□ -0.78
SENP6-209ENST00000485497 CLDN10P78369 228 aa10.18□□□□□ -0.78
SENP6-209ENST00000485497 EFHC2Q5JST6 749 aa10.18□□□□□ -0.78
SENP6-209ENST00000485497 ZNF295-AS1Q8N0V1 137 aa10.18□□□□□ -0.78
SENP6-209ENST00000485497 TPCN2Q8NHX9 752 aa10.18□□□□□ -0.78
SENP6-209ENST00000485497 C1orf216Q8TAB5 229 aa10.18□□□□□ -0.78
SENP6-209ENST00000485497 RUBCNLQ9H714 662 aa10.18□□□□□ -0.78
SENP6-209ENST00000485497 DNAAF2Q9NVR5 837 aaKnown RBP10.18□□□□□ -0.78
SENP6-209ENST00000485497 SCHIP1Q9P0W5 487 aaPredicted RBP10.18□□□□□ -0.78
SENP6-209ENST00000485497 TFIP11Q9UBB9 837 aaKnown RBP10.18□□□□□ -0.78
SENP6-209ENST00000485497 MAFBQ9Y5Q3 323 aaPredicted RBP10.18□□□□□ -0.78
SENP6-209ENST00000485497 THBS1P07996 1170 aa10.17□□□□□ -0.78
SENP6-209ENST00000485497 NBPF1Q3BBV0 1214 aa10.17□□□□□ -0.78
SENP6-209ENST00000485497 LARGE2Q8N3Y3 721 aa10.17□□□□□ -0.78
SENP6-209ENST00000485497 OGFOD1Q8N543 542 aa10.17□□□□□ -0.78
SENP6-209ENST00000485497 CRISPLD1Q9H336 500 aa10.17□□□□□ -0.78
SENP6-209ENST00000485497 KIAA1024Q9UPX6 916 aa10.17□□□□□ -0.78
SENP6-209ENST00000485497 USP3Q9Y6I4 520 aa10.17□□□□□ -0.78
SENP6-209ENST00000485497 PALM3A6NDB9 673 aaPredicted RBP10.16□□□□□ -0.78
SENP6-209ENST00000485497 ZBTB7BO15156 539 aaPredicted RBP10.16□□□□□ -0.78
SENP6-209ENST00000485497 ZNF385CQ66K41 422 aaPredicted RBP10.16□□□□□ -0.78
SENP6-209ENST00000485497 CCDC102BQ68D86 513 aa10.16□□□□□ -0.78
SENP6-209ENST00000485497 SVOPQ8N4V2 548 aa10.16□□□□□ -0.78
SENP6-209ENST00000485497 AIDAQ96BJ3 306 aa10.16□□□□□ -0.78
SENP6-209ENST00000485497 CFHR5Q9BXR6 569 aa10.16□□□□□ -0.78
SENP6-209ENST00000485497 CABP1Q9NZU7 370 aa10.16□□□□□ -0.78
SENP6-209ENST00000485497 ATP4AP20648 1035 aa10.15□□□□□ -0.78
SENP6-209ENST00000485497 EPHA4P54764 986 aa10.15□□□□□ -0.78
SENP6-209ENST00000485497 FOXK2Q01167 660 aa10.15□□□□□ -0.78
SENP6-209ENST00000485497 PPP1R12CQ9BZL4 782 aa10.15□□□□□ -0.78
SENP6-209ENST00000485497 PHF24Q9UPV7 400 aa10.15□□□□□ -0.78
SENP6-209ENST00000485497 TATP17735 454 aaPredicted RBP10.14□□□□□ -0.79
SENP6-209ENST00000485497 MX2P20592 715 aa10.14□□□□□ -0.79
SENP6-209ENST00000485497 UBAP2LQ14157 1087 aaKnown RBP10.14□□□□□ -0.79
SENP6-209ENST00000485497 SIX5Q8N196 739 aa10.14□□□□□ -0.79
SENP6-209ENST00000485497 WHAMMQ8TF30 809 aa10.14□□□□□ -0.79
SENP6-209ENST00000485497 ZDHHC3Q9NYG2 299 aa10.14□□□□□ -0.79
SENP6-209ENST00000485497 NSFL1CQ9UNZ2 370 aaKnown RBP10.14□□□□□ -0.79
SENP6-209ENST00000485497 RBM19Q9Y4C8 960 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms