RNA–Protein interactions for RNA: ENST00000484814.1

YIF1A-207, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-207ENST00000484814 ATG3Q9NT62 314 aa29.23■■■□□ 2.27
YIF1A-207ENST00000484814 TMOD3Q9NYL9 352 aa29.23■■■□□ 2.27
YIF1A-207ENST00000484814 EIF4A2Q14240 407 aaKnown RBP29.22■■■□□ 2.27
YIF1A-207ENST00000484814 IFNL2Q8IZJ0 200 aa29.22■■■□□ 2.27
YIF1A-207ENST00000484814 COL5A3P25940 1745 aaPredicted RBP29.22■■■□□ 2.27
YIF1A-207ENST00000484814 SLC4A9Q96Q91 983 aa29.21■■■□□ 2.27
YIF1A-207ENST00000484814 PXDNLA1KZ92 1463 aa29.18■■■□□ 2.26
YIF1A-207ENST00000484814 GNPATO15228 680 aa29.18■■■□□ 2.26
YIF1A-207ENST00000484814 CCER1Q8TC90 406 aaPredicted RBP29.18■■■□□ 2.26
YIF1A-207ENST00000484814 ATP6V1AP38606 617 aa29.17■■■□□ 2.26
YIF1A-207ENST00000484814 POLR3GLQ9BT43 218 aa29.16■■■□□ 2.26
YIF1A-207ENST00000484814 GPBP1L1Q9HC44 474 aaPredicted RBP29.16■■■□□ 2.26
YIF1A-207ENST00000484814 MYH14Q7Z406 1995 aaKnown RBP29.15■■■□□ 2.26
YIF1A-207ENST00000484814 HSPA5P11021 654 aaKnown RBP29.15■■■□□ 2.26
YIF1A-207ENST00000484814 KDM6AO15550 1401 aaPredicted RBP29.14■■■□□ 2.26
YIF1A-207ENST00000484814 C10orf71Q711Q0 1435 aa29.14■■■□□ 2.26
YIF1A-207ENST00000484814 BRCA1P38398 1863 aaKnown RBP29.13■■■□□ 2.25
YIF1A-207ENST00000484814 N4BP2Q86UW6 1770 aaPredicted RBP29.12■■■□□ 2.25
YIF1A-207ENST00000484814 ERVV-2B6SEH9 535 aa29.12■■■□□ 2.25
YIF1A-207ENST00000484814 MMP10P09238 476 aa29.12■■■□□ 2.25
YIF1A-207ENST00000484814 C4AP0C0L4 1744 aa29.11■■■□□ 2.25
YIF1A-207ENST00000484814 RC3H1Q5TC82 1133 aaKnown RBP29.11■■■□□ 2.25
YIF1A-207ENST00000484814 WWC3Q9ULE0 1092 aa29.11■■■□□ 2.25
YIF1A-207ENST00000484814 EIF4G2P78344 907 aaKnown RBP eCLIP29.1■■■□□ 2.25
YIF1A-207ENST00000484814 CNTNAP4Q9C0A0 1308 aa29.09■■■□□ 2.25
YIF1A-207ENST00000484814 KIF3CO14782 793 aa29.08■■■□□ 2.25
YIF1A-207ENST00000484814 HSPA6P17066 643 aa29.08■■■□□ 2.25
YIF1A-207ENST00000484814 DCAF5Q96JK2 942 aa29.08■■■□□ 2.25
YIF1A-207ENST00000484814 ADRA2BP18089 450 aa29.07■■■□□ 2.24
YIF1A-207ENST00000484814 ARHGEF1Q92888 912 aaKnown RBP29.06■■■□□ 2.24
YIF1A-207ENST00000484814 RTCBQ9Y3I0 505 aaKnown RBP29.06■■■□□ 2.24
YIF1A-207ENST00000484814 GYS1P13807 737 aa29.05■■■□□ 2.24
YIF1A-207ENST00000484814 TNNT2P45379 298 aaPredicted RBP29.05■■■□□ 2.24
YIF1A-207ENST00000484814 TGFB2P61812 414 aa29.05■■■□□ 2.24
YIF1A-207ENST00000484814 NLGN1Q8N2Q7 840 aa29.05■■■□□ 2.24
YIF1A-207ENST00000484814 ZNF526Q8TF50 670 aaPredicted RBP29.05■■■□□ 2.24
YIF1A-207ENST00000484814 HSP90AB1P08238 724 aaKnown RBP29.04■■■□□ 2.24
YIF1A-207ENST00000484814 TRAPPC3LQ5T215 181 aa29.04■■■□□ 2.24
YIF1A-207ENST00000484814 IFFO2Q5TF58 517 aa29.04■■■□□ 2.24
YIF1A-207ENST00000484814 ADAMTS7Q9UKP4 1686 aa29.04■■■□□ 2.24
YIF1A-207ENST00000484814 TJP1Q07157 1748 aa29.03■■■□□ 2.24
YIF1A-207ENST00000484814 RPS6KA4O75676 772 aa29.03■■■□□ 2.24
YIF1A-207ENST00000484814 PLEKHO1Q53GL0 409 aaPredicted RBP29.01■■■□□ 2.23
YIF1A-207ENST00000484814 PANK3Q9H999 370 aa29.01■■■□□ 2.23
YIF1A-207ENST00000484814 ARFGEF1Q9Y6D6 1849 aa29.01■■■□□ 2.23
YIF1A-207ENST00000484814 AEBP1Q8IUX7 1158 aa29■■■□□ 2.23
YIF1A-207ENST00000484814 SCN11AQ9UI33 1791 aa28.99■■■□□ 2.23
YIF1A-207ENST00000484814 A0A0G2JLW4 131 aa28.99■■■□□ 2.23
YIF1A-207ENST00000484814 KCNA3P22001 575 aa28.99■■■□□ 2.23
YIF1A-207ENST00000484814 AMOTQ4VCS5 1084 aa28.99■■■□□ 2.23
YIF1A-207ENST00000484814 ZNF530Q6P9A1 599 aaPredicted RBP28.99■■■□□ 2.23
YIF1A-207ENST00000484814 RBM42Q9BTD8 480 aaKnown RBP28.99■■■□□ 2.23
YIF1A-207ENST00000484814 DPEP1P16444 411 aa28.95■■■□□ 2.22
YIF1A-207ENST00000484814 CABP4P57796 275 aa28.95■■■□□ 2.22
YIF1A-207ENST00000484814 CCDC87Q9NVE4 849 aa28.94■■■□□ 2.22
YIF1A-207ENST00000484814 BCS1LQ9Y276 419 aa28.94■■■□□ 2.22
YIF1A-207ENST00000484814 RFC4P35249 363 aa28.92■■■□□ 2.22
YIF1A-207ENST00000484814 CRKLP46109 303 aaKnown RBP28.92■■■□□ 2.22
YIF1A-207ENST00000484814 MTHFSP49914 203 aa28.92■■■□□ 2.22
YIF1A-207ENST00000484814 USP42Q9H9J4 1324 aaKnown RBP28.92■■■□□ 2.22
YIF1A-207ENST00000484814 NFATC2IPQ8NCF5 419 aa28.91■■■□□ 2.22
YIF1A-207ENST00000484814 MRC1P22897 1456 aa28.91■■■□□ 2.22
YIF1A-207ENST00000484814 PTCD1O75127 700 aaKnown RBP28.9■■■□□ 2.22
YIF1A-207ENST00000484814 IL13P35225 146 aa28.9■■■□□ 2.22
YIF1A-207ENST00000484814 DDR1Q08345 913 aa28.9■■■□□ 2.22
YIF1A-207ENST00000484814 SRP68Q9UHB9 627 aaKnown RBP28.89■■■□□ 2.22
YIF1A-207ENST00000484814 PARP3Q9Y6F1 533 aa28.89■■■□□ 2.22
YIF1A-207ENST00000484814 FKBP8Q14318 412 aa28.88■■■□□ 2.21
YIF1A-207ENST00000484814 INTS5Q6P9B9 1019 aaKnown RBP28.88■■■□□ 2.21
YIF1A-207ENST00000484814 SULT6B1Q6IMI4 303 aa28.87■■■□□ 2.21
YIF1A-207ENST00000484814 VIRMAQ69YN4 1812 aaKnown RBP28.86■■■□□ 2.21
YIF1A-207ENST00000484814 TOMM70O94826 608 aa28.86■■■□□ 2.21
YIF1A-207ENST00000484814 FCHSD2O94868 740 aa28.86■■■□□ 2.21
YIF1A-207ENST00000484814 C1orf141Q5JVX7 400 aa28.86■■■□□ 2.21
YIF1A-207ENST00000484814 MORC1Q86VD1 984 aa28.86■■■□□ 2.21
YIF1A-207ENST00000484814 ARHGAP27Q6ZUM4 889 aa28.85■■■□□ 2.21
YIF1A-207ENST00000484814 DNAJC5GQ8N7S2 189 aa28.85■■■□□ 2.21
YIF1A-207ENST00000484814 NMRK2Q9NPI5 230 aa28.85■■■□□ 2.21
YIF1A-207ENST00000484814 NRXN2Q9P2S2 1712 aa28.84■■■□□ 2.21
YIF1A-207ENST00000484814 TM4SF1P30408 202 aa28.84■■■□□ 2.21
YIF1A-207ENST00000484814 SBF1O95248 1867 aa28.84■■■□□ 2.21
YIF1A-207ENST00000484814 KCPQ6ZWJ8 1503 aa28.84■■■□□ 2.21
YIF1A-207ENST00000484814 AMER1Q5JTC6 1135 aaPredicted RBP28.83■■■□□ 2.21
YIF1A-207ENST00000484814 POLRMTO00411 1230 aaKnown RBP28.82■■■□□ 2.2
YIF1A-207ENST00000484814 KIF7Q2M1P5 1343 aa28.81■■■□□ 2.2
YIF1A-207ENST00000484814 APLP1P51693 650 aa28.81■■■□□ 2.2
YIF1A-207ENST00000484814 PIM2Q9P1W9 311 aa28.81■■■□□ 2.2
YIF1A-207ENST00000484814 AFDNP55196 1824 aaKnown RBP28.8■■■□□ 2.2
YIF1A-207ENST00000484814 SOS1Q07889 1333 aaPredicted RBP28.8■■■□□ 2.2
YIF1A-207ENST00000484814 AKAP4Q5JQC9 854 aa28.8■■■□□ 2.2
YIF1A-207ENST00000484814 C9orf131Q5VYM1 1079 aa28.8■■■□□ 2.2
YIF1A-207ENST00000484814 SLC52A2Q9HAB3 445 aa28.8■■■□□ 2.2
YIF1A-207ENST00000484814 DNAJC10Q8IXB1 793 aa28.79■■■□□ 2.2
YIF1A-207ENST00000484814 UBR2Q8IWV8 1755 aa28.79■■■□□ 2.2
YIF1A-207ENST00000484814 WDR90Q96KV7 1748 aa28.78■■■□□ 2.2
YIF1A-207ENST00000484814 LGR6Q9HBX8 967 aa28.78■■■□□ 2.2
YIF1A-207ENST00000484814 DLEC1Q9Y238 1755 aa28.78■■■□□ 2.2
YIF1A-207ENST00000484814 CYP19A1P11511 503 aaPredicted RBP28.77■■■□□ 2.2
YIF1A-207ENST00000484814 KNSTRNQ9Y448 316 aa28.77■■■□□ 2.2
YIF1A-207ENST00000484814 CHRNA5P30532 468 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms