RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 AMIGO3Q86WK7 504 aa15.66■□□□□ 0.1
SCFD1-206ENST00000484733 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.65■□□□□ 0.1
SCFD1-206ENST00000484733 ATP6V1AP38606 617 aa15.65■□□□□ 0.1
SCFD1-206ENST00000484733 KIF7Q2M1P5 1343 aa15.65■□□□□ 0.1
SCFD1-206ENST00000484733 GRIN3BO60391 1043 aa15.65■□□□□ 0.1
SCFD1-206ENST00000484733 IL13P35225 146 aa15.64■□□□□ 0.09
SCFD1-206ENST00000484733 ZNF530Q6P9A1 599 aaPredicted RBP15.64■□□□□ 0.09
SCFD1-206ENST00000484733 KDM6AO15550 1401 aaPredicted RBP15.63■□□□□ 0.09
SCFD1-206ENST00000484733 RC3H1Q5TC82 1133 aaKnown RBP15.63■□□□□ 0.09
SCFD1-206ENST00000484733 PHF14O94880 888 aa15.62■□□□□ 0.09
SCFD1-206ENST00000484733 AEBP1Q8IUX7 1158 aa15.62■□□□□ 0.09
SCFD1-206ENST00000484733 COL5A3P25940 1745 aaPredicted RBP15.61■□□□□ 0.09
SCFD1-206ENST00000484733 GNPATO15228 680 aa15.61■□□□□ 0.09
SCFD1-206ENST00000484733 PER1O15534 1290 aaPredicted RBP15.61■□□□□ 0.09
SCFD1-206ENST00000484733 YBX3P16989 372 aaKnown RBP eCLIP15.61■□□□□ 0.095e-7■■■□□ 14.6
SCFD1-206ENST00000484733 SULT6B1Q6IMI4 303 aa15.61■□□□□ 0.09
SCFD1-206ENST00000484733 PELP1Q8IZL8 1130 aaKnown RBP15.61■□□□□ 0.09
SCFD1-206ENST00000484733 SLC4A9Q96Q91 983 aa15.61■□□□□ 0.09
SCFD1-206ENST00000484733 CABP4P57796 275 aa15.61■□□□□ 0.09
SCFD1-206ENST00000484733 C1orf141Q5JVX7 400 aa15.61■□□□□ 0.09
SCFD1-206ENST00000484733 MTHFSP49914 203 aa15.6■□□□□ 0.09
SCFD1-206ENST00000484733 SMIM5Q71RC9 77 aa15.6■□□□□ 0.09
SCFD1-206ENST00000484733 CNTNAP4Q9C0A0 1308 aa15.6■□□□□ 0.09
SCFD1-206ENST00000484733 CICQ96RK0 1608 aaPredicted RBP15.59■□□□□ 0.09
SCFD1-206ENST00000484733 ADRA2BP18089 450 aa15.59■□□□□ 0.09
SCFD1-206ENST00000484733 SCN11AQ9UI33 1791 aa15.59■□□□□ 0.09
SCFD1-206ENST00000484733 RBM42Q9BTD8 480 aaKnown RBP15.59■□□□□ 0.09
SCFD1-206ENST00000484733 RTCBQ9Y3I0 505 aaKnown RBP15.59■□□□□ 0.09
SCFD1-206ENST00000484733 NPC1L1Q9UHC9 1359 aa15.58■□□□□ 0.08
SCFD1-206ENST00000484733 TRAPPC3LQ5T215 181 aa15.58■□□□□ 0.08
SCFD1-206ENST00000484733 RPS6KA4O75676 772 aa15.57■□□□□ 0.08
SCFD1-206ENST00000484733 AKAP4Q5JQC9 854 aa15.57■□□□□ 0.08
SCFD1-206ENST00000484733 KIF13BQ9NQT8 1826 aa15.56■□□□□ 0.08
SCFD1-206ENST00000484733 NLGN1Q8N2Q7 840 aa15.56■□□□□ 0.08
SCFD1-206ENST00000484733 NFATC2IPQ8NCF5 419 aa15.56■□□□□ 0.08
SCFD1-206ENST00000484733 ARHGEF1Q92888 912 aaKnown RBP15.55■□□□□ 0.08
SCFD1-206ENST00000484733 MRC1P22897 1456 aa15.54■□□□□ 0.08
SCFD1-206ENST00000484733 MYH14Q7Z406 1995 aaKnown RBP15.54■□□□□ 0.08
SCFD1-206ENST00000484733 ADAMTS7Q9UKP4 1686 aa15.54■□□□□ 0.08
SCFD1-206ENST00000484733 TJP1Q07157 1748 aa15.54■□□□□ 0.08
SCFD1-206ENST00000484733 DIAPH1O60610 1272 aaKnown RBP15.54■□□□□ 0.08
SCFD1-206ENST00000484733 MMP10P09238 476 aa15.53■□□□□ 0.08
SCFD1-206ENST00000484733 SLC52A2Q9HAB3 445 aa15.53■□□□□ 0.08
SCFD1-206ENST00000484733 C1QTNF8P60827 252 aa15.52■□□□□ 0.08
SCFD1-206ENST00000484733 C4AP0C0L4 1744 aa15.52■□□□□ 0.08
SCFD1-206ENST00000484733 KIAA1551Q9HCM1 1747 aa15.52■□□□□ 0.08
SCFD1-206ENST00000484733 RNMTO43148 476 aaKnown RBP15.52■□□□□ 0.07
SCFD1-206ENST00000484733 GYS1P13807 737 aa15.52■□□□□ 0.07
SCFD1-206ENST00000484733 RFC4P35249 363 aa15.52■□□□□ 0.07
SCFD1-206ENST00000484733 TGFB2P61812 414 aa15.52■□□□□ 0.07
SCFD1-206ENST00000484733 CC2D1BQ5T0F9 858 aaKnown RBP15.52■□□□□ 0.07
SCFD1-206ENST00000484733 PTCD1O75127 700 aaKnown RBP15.51■□□□□ 0.07
SCFD1-206ENST00000484733 VIRMAQ69YN4 1812 aaKnown RBP15.51■□□□□ 0.07
SCFD1-206ENST00000484733 COL3A1P02461 1466 aaPredicted RBP15.51■□□□□ 0.07
SCFD1-206ENST00000484733 C10orf71Q711Q0 1435 aa15.51■□□□□ 0.07
SCFD1-206ENST00000484733 CRKLP46109 303 aaKnown RBP15.51■□□□□ 0.07
SCFD1-206ENST00000484733 LGR6Q9HBX8 967 aa15.51■□□□□ 0.07
SCFD1-206ENST00000484733 HMOX1P09601 288 aa15.5■□□□□ 0.07
SCFD1-206ENST00000484733 ADCY9O60503 1353 aa15.5■□□□□ 0.07
SCFD1-206ENST00000484733 MTHFSDQ2M296 383 aaKnown RBP15.5■□□□□ 0.07
SCFD1-206ENST00000484733 PXDNLA1KZ92 1463 aa15.5■□□□□ 0.07
SCFD1-206ENST00000484733 GIGYF1O75420 1035 aaPredicted RBP15.49■□□□□ 0.07
SCFD1-206ENST00000484733 CCDC87Q9NVE4 849 aa15.49■□□□□ 0.07
SCFD1-206ENST00000484733 INTS5Q6P9B9 1019 aaKnown RBP15.49■□□□□ 0.07
SCFD1-206ENST00000484733 PARP3Q9Y6F1 533 aa15.48■□□□□ 0.07
SCFD1-206ENST00000484733 ATP10DQ9P241 1426 aa15.48■□□□□ 0.07
SCFD1-206ENST00000484733 USP42Q9H9J4 1324 aaKnown RBP15.47■□□□□ 0.07
SCFD1-206ENST00000484733 KCPQ6ZWJ8 1503 aa15.47■□□□□ 0.07
SCFD1-206ENST00000484733 N4BP2Q86UW6 1770 aaPredicted RBP15.47■□□□□ 0.07
SCFD1-206ENST00000484733 VSIG10Q8N0Z9 540 aa15.46■□□□□ 0.07
SCFD1-206ENST00000484733 DNAJC10Q8IXB1 793 aa15.46■□□□□ 0.07
SCFD1-206ENST00000484733 CYP19A1P11511 503 aaPredicted RBP15.45■□□□□ 0.06
SCFD1-206ENST00000484733 UBR2Q8IWV8 1755 aa15.45■□□□□ 0.06
SCFD1-206ENST00000484733 SOS1Q07889 1333 aaPredicted RBP15.45■□□□□ 0.06
SCFD1-206ENST00000484733 UTRNP46939 3433 aa15.45■□□□□ 0.06
SCFD1-206ENST00000484733 SRP68Q9UHB9 627 aaKnown RBP15.44■□□□□ 0.06
SCFD1-206ENST00000484733 BRCA1P38398 1863 aaKnown RBP15.44■□□□□ 0.06
SCFD1-206ENST00000484733 TM4SF1P30408 202 aa15.44■□□□□ 0.06
SCFD1-206ENST00000484733 SLC39A6Q13433 755 aa15.44■□□□□ 0.06
SCFD1-206ENST00000484733 FKBP8Q14318 412 aa15.44■□□□□ 0.06
SCFD1-206ENST00000484733 GAS2L2Q8NHY3 880 aa15.44■□□□□ 0.06
SCFD1-206ENST00000484733 A0A0G2JLW4 131 aa15.43■□□□□ 0.06
SCFD1-206ENST00000484733 SENP3-EIF4A1A0A087X0R7 540 aa15.43■□□□□ 0.06
SCFD1-206ENST00000484733 DPEP1P16444 411 aa15.43■□□□□ 0.06
SCFD1-206ENST00000484733 U2SURPO15042 1029 aaKnown RBP15.42■□□□□ 0.06
SCFD1-206ENST00000484733 KCNA3P22001 575 aa15.42■□□□□ 0.06
SCFD1-206ENST00000484733 SIPA1L3O60292 1781 aaPredicted RBP15.42■□□□□ 0.06
SCFD1-206ENST00000484733 GNAT3A8MTJ3 354 aa15.42■□□□□ 0.06
SCFD1-206ENST00000484733 ZPR1O75312 459 aa15.42■□□□□ 0.06
SCFD1-206ENST00000484733 DDR1Q08345 913 aa15.42■□□□□ 0.06
SCFD1-206ENST00000484733 GPBP1L1Q9HC44 474 aaPredicted RBP15.42■□□□□ 0.06
SCFD1-206ENST00000484733 WWC3Q9ULE0 1092 aa15.42■□□□□ 0.06
SCFD1-206ENST00000484733 POLRMTO00411 1230 aaKnown RBP15.41■□□□□ 0.06
SCFD1-206ENST00000484733 IL17REQ8NFR9 667 aa15.41■□□□□ 0.06
SCFD1-206ENST00000484733 CFAP53Q96M91 514 aa15.41■□□□□ 0.06
SCFD1-206ENST00000484733 NARFQ9UHQ1 456 aa15.41■□□□□ 0.06
SCFD1-206ENST00000484733 ARFGEF1Q9Y6D6 1849 aa15.41■□□□□ 0.06
SCFD1-206ENST00000484733 BCS1LQ9Y276 419 aa15.4■□□□□ 0.06
SCFD1-206ENST00000484733 USPL1Q5W0Q7 1092 aa15.4■□□□□ 0.06
SCFD1-206ENST00000484733 COL15A1P39059 1388 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms