RNA–Protein interactions for RNA: ENST00000484683.1

RPRD1B-205, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-205ENST00000484683 TEFQ10587 303 aa12.35□□□□□ -0.43
RPRD1B-205ENST00000484683 RTF1Q92541 710 aaKnown RBP12.35□□□□□ -0.43
RPRD1B-205ENST00000484683 ARXQ96QS3 562 aa12.35□□□□□ -0.43
RPRD1B-205ENST00000484683 SLC52A2Q9HAB3 445 aa12.35□□□□□ -0.43
RPRD1B-205ENST00000484683 PNPLA7Q6ZV29 1317 aa12.35□□□□□ -0.43
RPRD1B-205ENST00000484683 RNMTO43148 476 aaKnown RBP12.34□□□□□ -0.43
RPRD1B-205ENST00000484683 PTCD1O75127 700 aaKnown RBP12.34□□□□□ -0.43
RPRD1B-205ENST00000484683 PRKAR2BP31323 418 aa12.34□□□□□ -0.43
RPRD1B-205ENST00000484683 TTC5Q8N0Z6 440 aa12.34□□□□□ -0.43
RPRD1B-205ENST00000484683 SHANK3Q9BYB0 1731 aa12.34□□□□□ -0.43
RPRD1B-205ENST00000484683 GNPATO15228 680 aa12.33□□□□□ -0.44
RPRD1B-205ENST00000484683 PHF14O94880 888 aa12.33□□□□□ -0.44
RPRD1B-205ENST00000484683 SSFA2P28290 1259 aa12.33□□□□□ -0.44
RPRD1B-205ENST00000484683 COL23A1Q86Y22 540 aaPredicted RBP12.33□□□□□ -0.44
RPRD1B-205ENST00000484683 KLHL34Q8N239 644 aa12.33□□□□□ -0.44
RPRD1B-205ENST00000484683 RTCBQ9Y3I0 505 aaKnown RBP12.33□□□□□ -0.44
RPRD1B-205ENST00000484683 PTGER2P43116 358 aa12.32□□□□□ -0.44
RPRD1B-205ENST00000484683 TRAPPC3LQ5T215 181 aa12.32□□□□□ -0.44
RPRD1B-205ENST00000484683 KDM6AO15550 1401 aaPredicted RBP12.31□□□□□ -0.44
RPRD1B-205ENST00000484683 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.31□□□□□ -0.44
RPRD1B-205ENST00000484683 ADRA2BP18089 450 aa12.31□□□□□ -0.44
RPRD1B-205ENST00000484683 RC3H1Q5TC82 1133 aaKnown RBP12.31□□□□□ -0.44
RPRD1B-205ENST00000484683 LINC00116Q8NCU8 138 aa12.31□□□□□ -0.44
RPRD1B-205ENST00000484683 RSPH6AQ9H0K4 717 aa12.31□□□□□ -0.44
RPRD1B-205ENST00000484683 LGR6Q9HBX8 967 aa12.31□□□□□ -0.44
RPRD1B-205ENST00000484683 MAPK8IP3Q9UPT6 1336 aa12.31□□□□□ -0.44
RPRD1B-205ENST00000484683 MAP3K5Q99683 1374 aa12.3□□□□□ -0.44
RPRD1B-205ENST00000484683 ITPK1Q13572 414 aa12.3□□□□□ -0.44
RPRD1B-205ENST00000484683 NPM2Q86SE8 214 aaKnown RBP12.3□□□□□ -0.44
RPRD1B-205ENST00000484683 FHDC1Q9C0D6 1143 aaPredicted RBP12.3□□□□□ -0.44
RPRD1B-205ENST00000484683 RFC4P35249 363 aa12.29□□□□□ -0.44
RPRD1B-205ENST00000484683 SYT17Q9BSW7 474 aa12.29□□□□□ -0.44
RPRD1B-205ENST00000484683 PAPPAQ13219 1627 aa12.29□□□□□ -0.44
RPRD1B-205ENST00000484683 LY75O60449 1722 aa12.28□□□□□ -0.44
RPRD1B-205ENST00000484683 COL3A1P02461 1466 aaPredicted RBP12.28□□□□□ -0.44
RPRD1B-205ENST00000484683 HTATSF1O43719 755 aaKnown RBP12.28□□□□□ -0.44
RPRD1B-205ENST00000484683 STARD3NLO95772 234 aa12.28□□□□□ -0.44
RPRD1B-205ENST00000484683 MSL1Q68DK7 614 aa12.28□□□□□ -0.44
RPRD1B-205ENST00000484683 PHACTR3Q96KR7 559 aa12.28□□□□□ -0.44
RPRD1B-205ENST00000484683 SGIP1Q9BQI5 828 aa12.28□□□□□ -0.44
RPRD1B-205ENST00000484683 TEX13AQ9BXU3 409 aaPredicted RBP12.28□□□□□ -0.44
RPRD1B-205ENST00000484683 MYBBP1AQ9BQG0 1328 aaKnown RBP12.28□□□□□ -0.44
RPRD1B-205ENST00000484683 CNTNAP4Q9C0A0 1308 aa12.28□□□□□ -0.44
RPRD1B-205ENST00000484683 BTBD11A6QL63 1104 aa12.27□□□□□ -0.45
RPRD1B-205ENST00000484683 RPS6KA4O75676 772 aa12.27□□□□□ -0.45
RPRD1B-205ENST00000484683 SLC39A6Q13433 755 aa12.27□□□□□ -0.45
RPRD1B-205ENST00000484683 WDR43Q15061 677 aaKnown RBP eCLIP12.27□□□□□ -0.45
RPRD1B-205ENST00000484683 VSIG10Q8N0Z9 540 aa12.27□□□□□ -0.45
RPRD1B-205ENST00000484683 NLGN1Q8N2Q7 840 aa12.27□□□□□ -0.45
RPRD1B-205ENST00000484683 TOGARAM1Q9Y4F4 1720 aa12.26□□□□□ -0.45
RPRD1B-205ENST00000484683 CRKLP46109 303 aaKnown RBP12.26□□□□□ -0.45
RPRD1B-205ENST00000484683 IL17REQ8NFR9 667 aa12.26□□□□□ -0.45
RPRD1B-205ENST00000484683 FMNL2Q96PY5 1086 aa12.26□□□□□ -0.45
RPRD1B-205ENST00000484683 CASZ1Q86V15 1759 aa12.25□□□□□ -0.45
RPRD1B-205ENST00000484683 ITGB4P16144 1822 aa12.25□□□□□ -0.45
RPRD1B-205ENST00000484683 ZPR1O75312 459 aa12.25□□□□□ -0.45
RPRD1B-205ENST00000484683 GPR162Q16538 588 aa12.25□□□□□ -0.45
RPRD1B-205ENST00000484683 ZNF790Q6PG37 636 aa12.25□□□□□ -0.45
RPRD1B-205ENST00000484683 SLC4A9Q96Q91 983 aa12.25□□□□□ -0.45
RPRD1B-205ENST00000484683 DNAJC10Q8IXB1 793 aa12.24□□□□□ -0.45
RPRD1B-205ENST00000484683 PNISRQ8TF01 805 aaKnown RBP12.24□□□□□ -0.45
RPRD1B-205ENST00000484683 ARHGEF1Q92888 912 aaKnown RBP12.24□□□□□ -0.45
RPRD1B-205ENST00000484683 CCDC87Q9NVE4 849 aa12.24□□□□□ -0.45
RPRD1B-205ENST00000484683 CD2APQ9Y5K6 639 aa12.24□□□□□ -0.45
RPRD1B-205ENST00000484683 C4BP0C0L5 1744 aa12.23□□□□□ -0.45
RPRD1B-205ENST00000484683 C5P01031 1676 aa12.23□□□□□ -0.45
RPRD1B-205ENST00000484683 ZNF316A6NFI3 1004 aaPredicted RBP12.23□□□□□ -0.45
RPRD1B-205ENST00000484683 LMOD3Q0VAK6 560 aa12.23□□□□□ -0.45
RPRD1B-205ENST00000484683 MCM10Q7L590 875 aa12.23□□□□□ -0.45
RPRD1B-205ENST00000484683 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
RPRD1B-205ENST00000484683 A0A087WZG4 1122 aa12.22□□□□□ -0.45
RPRD1B-205ENST00000484683 CYP19A1P11511 503 aaPredicted RBP12.22□□□□□ -0.45
RPRD1B-205ENST00000484683 TAF7Q15545 349 aaPredicted RBP12.22□□□□□ -0.45
RPRD1B-205ENST00000484683 NFE2L2Q16236 605 aa12.22□□□□□ -0.45
RPRD1B-205ENST00000484683 PRKRIP1Q9H875 184 aaPredicted RBP12.22□□□□□ -0.45
RPRD1B-205ENST00000484683 PARP3Q9Y6F1 533 aa12.22□□□□□ -0.45
RPRD1B-205ENST00000484683 CEMIPQ8WUJ3 1361 aa12.21□□□□□ -0.45
RPRD1B-205ENST00000484683 MMP10P09238 476 aa12.21□□□□□ -0.45
RPRD1B-205ENST00000484683 SMIM5Q71RC9 77 aa12.21□□□□□ -0.45
RPRD1B-205ENST00000484683 AMIGO3Q86WK7 504 aa12.21□□□□□ -0.45
RPRD1B-205ENST00000484683 ZNF496Q96IT1 587 aaPredicted RBP12.21□□□□□ -0.45
RPRD1B-205ENST00000484683 MRC1P22897 1456 aa12.21□□□□□ -0.46
RPRD1B-205ENST00000484683 QSER1Q2KHR3 1735 aa12.2□□□□□ -0.46
RPRD1B-205ENST00000484683 GRIN3BO60391 1043 aa12.2□□□□□ -0.46
RPRD1B-205ENST00000484683 SNRPA1P09661 255 aaKnown RBP12.2□□□□□ -0.46
RPRD1B-205ENST00000484683 CANXP27824 592 aaKnown RBP12.2□□□□□ -0.46
RPRD1B-205ENST00000484683 INTS5Q6P9B9 1019 aaKnown RBP12.2□□□□□ -0.46
RPRD1B-205ENST00000484683 PLEKHF1Q96S99 279 aa12.2□□□□□ -0.46
RPRD1B-205ENST00000484683 ZNF330Q9Y3S2 320 aaPredicted RBP12.2□□□□□ -0.46
RPRD1B-205ENST00000484683 HEG1Q9ULI3 1381 aa12.19□□□□□ -0.46
RPRD1B-205ENST00000484683 ANP32CO43423 234 aa12.19□□□□□ -0.46
RPRD1B-205ENST00000484683 GYS1P13807 737 aa12.19□□□□□ -0.46
RPRD1B-205ENST00000484683 YY1P25490 414 aa12.19□□□□□ -0.46
RPRD1B-205ENST00000484683 RIPK4P57078 832 aa12.19□□□□□ -0.46
RPRD1B-205ENST00000484683 DCTN1Q14203 1278 aa12.19□□□□□ -0.46
RPRD1B-205ENST00000484683 RUNDC1Q96C34 613 aa12.18□□□□□ -0.46
RPRD1B-205ENST00000484683 ZBTB1Q9Y2K1 713 aa12.18□□□□□ -0.46
RPRD1B-205ENST00000484683 SCN11AQ9UI33 1791 aa12.18□□□□□ -0.46
RPRD1B-205ENST00000484683 SOS1Q07889 1333 aaPredicted RBP12.17□□□□□ -0.46
RPRD1B-205ENST00000484683 USP42Q9H9J4 1324 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms