RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 PHKA2P46019 1235 aa12.92□□□□□ -0.34
UBR3-210ENST00000484596 SCNN1DP51172 638 aa12.92□□□□□ -0.34
UBR3-210ENST00000484596 TMEM214Q6NUQ4 689 aaKnown RBP12.91□□□□□ -0.34
UBR3-210ENST00000484596 ADAMTS19Q8TE59 1207 aa12.91□□□□□ -0.34
UBR3-210ENST00000484596 GMCL1Q96IK5 515 aa12.91□□□□□ -0.34
UBR3-210ENST00000484596 GDF10P55107 478 aa12.9□□□□□ -0.34
UBR3-210ENST00000484596 F11P03951 625 aa12.89□□□□□ -0.35
UBR3-210ENST00000484596 INHAP05111 366 aa12.89□□□□□ -0.35
UBR3-210ENST00000484596 GTF2E1P29083 439 aaPredicted RBP12.89□□□□□ -0.35
UBR3-210ENST00000484596 TLR1Q15399 786 aa12.89□□□□□ -0.35
UBR3-210ENST00000484596 C4orf17Q53FE4 359 aa12.89□□□□□ -0.35
UBR3-210ENST00000484596 GNASQ5JWF2 1037 aa12.89□□□□□ -0.35
UBR3-210ENST00000484596 NFATC2IPQ8NCF5 419 aa12.89□□□□□ -0.35
UBR3-210ENST00000484596 H7C1W4 665 aa12.88□□□□□ -0.35
UBR3-210ENST00000484596 GPR25O00155 361 aa12.88□□□□□ -0.35
UBR3-210ENST00000484596 GAS6Q14393 721 aa12.88□□□□□ -0.35
UBR3-210ENST00000484596 ZNF777Q9ULD5 760 aaPredicted RBP12.88□□□□□ -0.35
UBR3-210ENST00000484596 PCDHGA11Q9Y5H2 935 aa12.88□□□□□ -0.35
UBR3-210ENST00000484596 EML3Q32P44 896 aa12.87□□□□□ -0.35
UBR3-210ENST00000484596 HDGFL1Q5TGJ6 251 aa12.87□□□□□ -0.35
UBR3-210ENST00000484596 PPARGC1BQ86YN6 1023 aaKnown RBP12.87□□□□□ -0.35
UBR3-210ENST00000484596 GTPBP3Q969Y2 492 aaKnown RBP12.87□□□□□ -0.35
UBR3-210ENST00000484596 FOXR1Q6PIV2 292 aa12.86□□□□□ -0.35
UBR3-210ENST00000484596 GPAMQ9HCL2 828 aa12.86□□□□□ -0.35
UBR3-210ENST00000484596 TMEM229AB2RXF0 380 aa12.85□□□□□ -0.35
UBR3-210ENST00000484596 LZTS3O60299 673 aaPredicted RBP12.85□□□□□ -0.35
UBR3-210ENST00000484596 SLURP2P0DP57 97 aa12.85□□□□□ -0.35
UBR3-210ENST00000484596 NCOA4Q13772 614 aa12.85□□□□□ -0.35
UBR3-210ENST00000484596 RHBDD1Q8TEB9 315 aa12.85□□□□□ -0.35
UBR3-210ENST00000484596 SERTAD1Q9UHV2 236 aa12.85□□□□□ -0.35
UBR3-210ENST00000484596 A0A1B0GTH6 734 aa12.84□□□□□ -0.35
UBR3-210ENST00000484596 ARID3CA6NKF2 412 aa12.84□□□□□ -0.35
UBR3-210ENST00000484596 DEPDC4Q8N2C3 294 aa12.84□□□□□ -0.35
UBR3-210ENST00000484596 NUCKS1Q9H1E3 243 aaKnown RBP12.84□□□□□ -0.35
UBR3-210ENST00000484596 NOD1Q9Y239 953 aa12.84□□□□□ -0.35
UBR3-210ENST00000484596 USP17L5A8MUK1 530 aa12.83□□□□□ -0.36
UBR3-210ENST00000484596 SMTNP53814 917 aa12.83□□□□□ -0.36
UBR3-210ENST00000484596 WHAMMQ8TF30 809 aa12.83□□□□□ -0.36
UBR3-210ENST00000484596 ADAMTS2O95450 1211 aa12.82□□□□□ -0.36
UBR3-210ENST00000484596 THBS1P07996 1170 aa12.82□□□□□ -0.36
UBR3-210ENST00000484596 GTF2IP78347 998 aa12.82□□□□□ -0.36
UBR3-210ENST00000484596 SRSF11Q05519 484 aaKnown RBP12.82□□□□□ -0.36
UBR3-210ENST00000484596 ZNF385CQ66K41 422 aaPredicted RBP12.82□□□□□ -0.36
UBR3-210ENST00000484596 UCN2Q96RP3 112 aa12.82□□□□□ -0.36
UBR3-210ENST00000484596 TBC1D9Q6ZT07 1266 aa12.81□□□□□ -0.36
UBR3-210ENST00000484596 SLC4A9Q96Q91 983 aa12.81□□□□□ -0.36
UBR3-210ENST00000484596 MSX1P28360 303 aa12.8□□□□□ -0.36
UBR3-210ENST00000484596 SVOPQ8N4V2 548 aa12.8□□□□□ -0.36
UBR3-210ENST00000484596 TRERF1Q96PN7 1200 aa12.8□□□□□ -0.36
UBR3-210ENST00000484596 MBIPQ9NS73 344 aa12.8□□□□□ -0.36
UBR3-210ENST00000484596 CALR3Q96L12 384 aaKnown RBP12.79□□□□□ -0.36
UBR3-210ENST00000484596 SERPINA10Q9UK55 444 aa12.79□□□□□ -0.36
UBR3-210ENST00000484596 PLA2G4AP47712 749 aa12.78□□□□□ -0.36
UBR3-210ENST00000484596 PSME1Q06323 249 aa12.78□□□□□ -0.36
UBR3-210ENST00000484596 NIFKQ9BYG3 293 aaKnown RBP12.78□□□□□ -0.36
UBR3-210ENST00000484596 RUBCNLQ9H714 662 aa12.78□□□□□ -0.36
UBR3-210ENST00000484596 C1orf115Q9H7X2 142 aa12.78□□□□□ -0.36
UBR3-210ENST00000484596 A6NJY4 79 aa12.77□□□□□ -0.37
UBR3-210ENST00000484596 MTFR1Q15390 333 aa12.77□□□□□ -0.37
UBR3-210ENST00000484596 CCDC97Q96F63 343 aaPredicted RBP12.77□□□□□ -0.37
UBR3-210ENST00000484596 USP17L3A6NCW0 530 aa12.76□□□□□ -0.37
UBR3-210ENST00000484596 USP17L4A6NCW7 530 aa12.76□□□□□ -0.37
UBR3-210ENST00000484596 CDK2AP1O14519 115 aa12.76□□□□□ -0.37
UBR3-210ENST00000484596 CSB-PGBD3P0DP91 1061 aa12.76□□□□□ -0.37
UBR3-210ENST00000484596 USP17L2Q6R6M4 530 aa12.76□□□□□ -0.37
UBR3-210ENST00000484596 LYPD4Q6UWN0 246 aa12.76□□□□□ -0.37
UBR3-210ENST00000484596 USP17L1Q7RTZ2 530 aa12.76□□□□□ -0.37
UBR3-210ENST00000484596 PLEKHM2Q8IWE5 1019 aa12.76□□□□□ -0.37
UBR3-210ENST00000484596 PGBD3Q8N328 593 aa12.76□□□□□ -0.37
UBR3-210ENST00000484596 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.76□□□□□ -0.37
UBR3-210ENST00000484596 GLMNQ92990 594 aa12.76□□□□□ -0.37
UBR3-210ENST00000484596 ADAMTS8Q9UP79 889 aa12.76□□□□□ -0.37
UBR3-210ENST00000484596 IQSEC3Q9UPP2 1182 aaPredicted RBP12.76□□□□□ -0.37
UBR3-210ENST00000484596 USP3Q9Y6I4 520 aa12.76□□□□□ -0.37
UBR3-210ENST00000484596 ATP9BO43861 1147 aa12.75□□□□□ -0.37
UBR3-210ENST00000484596 IGF1RP08069 1367 aa12.75□□□□□ -0.37
UBR3-210ENST00000484596 ZNF295-AS1Q8N0V1 137 aa12.75□□□□□ -0.37
UBR3-210ENST00000484596 BACH1O14867 736 aa12.74□□□□□ -0.37
UBR3-210ENST00000484596 ARHGEF15O94989 841 aa12.74□□□□□ -0.37
UBR3-210ENST00000484596 UBAP2LQ14157 1087 aaKnown RBP12.74□□□□□ -0.37
UBR3-210ENST00000484596 ZNF358Q9NW07 568 aa12.74□□□□□ -0.37
UBR3-210ENST00000484596 LBRQ14739 615 aaKnown RBP12.73□□□□□ -0.37
UBR3-210ENST00000484596 TRIM50Q86XT4 487 aa12.73□□□□□ -0.37
UBR3-210ENST00000484596 CCDC82Q8N4S0 544 aa12.73□□□□□ -0.37
UBR3-210ENST00000484596 AIDAQ96BJ3 306 aa12.73□□□□□ -0.37
UBR3-210ENST00000484596 CFHR5Q9BXR6 569 aa12.73□□□□□ -0.37
UBR3-210ENST00000484596 ZBTB7BO15156 539 aaPredicted RBP12.72□□□□□ -0.37
UBR3-210ENST00000484596 MX2P20592 715 aa12.72□□□□□ -0.37
UBR3-210ENST00000484596 EFHC2Q5JST6 749 aa12.72□□□□□ -0.37
UBR3-210ENST00000484596 CRISPLD1Q9H336 500 aa12.72□□□□□ -0.37
UBR3-210ENST00000484596 KIAA1024Q9UPX6 916 aa12.72□□□□□ -0.37
UBR3-210ENST00000484596 CELA2BP08218 269 aaPredicted RBP12.71□□□□□ -0.37
UBR3-210ENST00000484596 CLDN10P78369 228 aa12.71□□□□□ -0.37
UBR3-210ENST00000484596 CABP1Q9NZU7 370 aa12.71□□□□□ -0.37
UBR3-210ENST00000484596 ATP4AP20648 1035 aa12.7□□□□□ -0.38
UBR3-210ENST00000484596 ATP1A2P50993 1020 aa12.69□□□□□ -0.38
UBR3-210ENST00000484596 TPCN2Q8NHX9 752 aa12.69□□□□□ -0.38
UBR3-210ENST00000484596 C1orf216Q8TAB5 229 aa12.69□□□□□ -0.38
UBR3-210ENST00000484596 ARID3AQ99856 593 aa12.69□□□□□ -0.38
UBR3-210ENST00000484596 SCHIP1Q9P0W5 487 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms