RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 SIPA1L3O60292 1781 aaPredicted RBP8.49□□□□□ -1.05
PDZRN3-209ENST00000484487 HSP90AB1P08238 724 aaKnown RBP8.49□□□□□ -1.05
PDZRN3-209ENST00000484487 AKAP4Q5JQC9 854 aa8.49□□□□□ -1.05
PDZRN3-209ENST00000484487 ZNF530Q6P9A1 599 aaPredicted RBP8.49□□□□□ -1.05
PDZRN3-209ENST00000484487 BARGINQ6ZT62 677 aa8.49□□□□□ -1.05
PDZRN3-209ENST00000484487 IFNL2Q8IZJ0 200 aa8.49□□□□□ -1.05
PDZRN3-209ENST00000484487 ZCRB1Q8TBF4 217 aaKnown RBP8.49□□□□□ -1.05
PDZRN3-209ENST00000484487 ZBTB47Q9UFB7 747 aaPredicted RBP8.49□□□□□ -1.05
PDZRN3-209ENST00000484487 TRPC5Q9UL62 973 aaPredicted RBP8.49□□□□□ -1.05
PDZRN3-209ENST00000484487 CACNA1FO60840 1977 aa8.49□□□□□ -1.05
PDZRN3-209ENST00000484487 AFF2P51816 1311 aa8.49□□□□□ -1.05
PDZRN3-209ENST00000484487 IL16Q14005 1332 aa8.49□□□□□ -1.05
PDZRN3-209ENST00000484487 ZNF521Q96K83 1311 aa8.49□□□□□ -1.05
PDZRN3-209ENST00000484487 LRRC37A3O60309 1634 aa8.48□□□□□ -1.05
PDZRN3-209ENST00000484487 ITGB4P16144 1822 aa8.48□□□□□ -1.05
PDZRN3-209ENST00000484487 E9PSI1 815 aa8.48□□□□□ -1.05
PDZRN3-209ENST00000484487 EXOC5O00471 708 aa8.48□□□□□ -1.05
PDZRN3-209ENST00000484487 ZNF772Q68DY9 489 aaPredicted RBP8.48□□□□□ -1.05
PDZRN3-209ENST00000484487 USP35Q9P2H5 1018 aa8.48□□□□□ -1.05
PDZRN3-209ENST00000484487 TRIM35Q9UPQ4 493 aa8.48□□□□□ -1.05
PDZRN3-209ENST00000484487 PCDH11XQ9BZA7 1347 aa8.48□□□□□ -1.05
PDZRN3-209ENST00000484487 PCDH11YQ9BZA8 1340 aa8.48□□□□□ -1.05
PDZRN3-209ENST00000484487 DISP2A7MBM2 1401 aa8.47□□□□□ -1.05
PDZRN3-209ENST00000484487 GNAI1P63096 354 aa8.47□□□□□ -1.05
PDZRN3-209ENST00000484487 DCBLD2Q96PD2 775 aa8.47□□□□□ -1.05
PDZRN3-209ENST00000484487 MYH16Q9H6N6 1097 aa8.47□□□□□ -1.05
PDZRN3-209ENST00000484487 ATRNO75882 1429 aa8.46□□□□□ -1.05
PDZRN3-209ENST00000484487 KDM3BQ7LBC6 1761 aa8.46□□□□□ -1.05
PDZRN3-209ENST00000484487 SENP3-EIF4A1A0A087X0R7 540 aa8.46□□□□□ -1.06
PDZRN3-209ENST00000484487 GALR2O43603 387 aaPredicted RBP8.46□□□□□ -1.06
PDZRN3-209ENST00000484487 PHKG2P15735 406 aa8.46□□□□□ -1.06
PDZRN3-209ENST00000484487 SLFN5Q08AF3 891 aa8.46□□□□□ -1.06
PDZRN3-209ENST00000484487 RASEFQ8IZ41 740 aa8.46□□□□□ -1.06
PDZRN3-209ENST00000484487 GJD4Q96KN9 370 aaPredicted RBP8.46□□□□□ -1.06
PDZRN3-209ENST00000484487 IFT57Q9NWB7 429 aa8.46□□□□□ -1.06
PDZRN3-209ENST00000484487 BABAM1Q9NWV8 329 aa8.46□□□□□ -1.06
PDZRN3-209ENST00000484487 GLI3P10071 1580 aa8.46□□□□□ -1.06
PDZRN3-209ENST00000484487 THSD7AQ9UPZ6 1657 aa8.46□□□□□ -1.06
PDZRN3-209ENST00000484487 TNS2Q63HR2 1409 aa8.46□□□□□ -1.06
PDZRN3-209ENST00000484487 BRWD3Q6RI45 1802 aa8.45□□□□□ -1.06
PDZRN3-209ENST00000484487 TEFQ10587 303 aa8.45□□□□□ -1.06
PDZRN3-209ENST00000484487 DDB1Q16531 1140 aa8.45□□□□□ -1.06
PDZRN3-209ENST00000484487 DCAF5Q96JK2 942 aa8.45□□□□□ -1.06
PDZRN3-209ENST00000484487 QTRT2Q9H974 415 aaKnown RBP8.45□□□□□ -1.06
PDZRN3-209ENST00000484487 DOT1LQ8TEK3 1739 aa8.44□□□□□ -1.06
PDZRN3-209ENST00000484487 RNMTO43148 476 aaKnown RBP8.44□□□□□ -1.06
PDZRN3-209ENST00000484487 VASPP50552 380 aaPredicted RBP8.44□□□□□ -1.06
PDZRN3-209ENST00000484487 NKX1-1Q15270 411 aaPredicted RBP8.44□□□□□ -1.06
PDZRN3-209ENST00000484487 MCM10Q7L590 875 aa8.44□□□□□ -1.06
PDZRN3-209ENST00000484487 TRMT2AQ8IZ69 625 aaKnown RBP8.44□□□□□ -1.06
PDZRN3-209ENST00000484487 KLHL34Q8N239 644 aa8.44□□□□□ -1.06
PDZRN3-209ENST00000484487 DDX54Q8TDD1 881 aaKnown RBP8.44□□□□□ -1.06
PDZRN3-209ENST00000484487 CFAP44Q96MT7 982 aa8.44□□□□□ -1.06
PDZRN3-209ENST00000484487 SBF2Q86WG5 1849 aa8.44□□□□□ -1.06
PDZRN3-209ENST00000484487 CEMIPQ8WUJ3 1361 aa8.44□□□□□ -1.06
PDZRN3-209ENST00000484487 ERVV-2B6SEH9 535 aa8.43□□□□□ -1.06
PDZRN3-209ENST00000484487 CYP27B1O15528 508 aa8.43□□□□□ -1.06
PDZRN3-209ENST00000484487 ONECUT3O60422 494 aaPredicted RBP8.43□□□□□ -1.06
PDZRN3-209ENST00000484487 RBM6P78332 1123 aaKnown RBP8.43□□□□□ -1.06
PDZRN3-209ENST00000484487 DCTN1Q14203 1278 aa8.43□□□□□ -1.06
PDZRN3-209ENST00000484487 TAF7Q15545 349 aaPredicted RBP8.43□□□□□ -1.06
PDZRN3-209ENST00000484487 FAM98CQ17RN3 349 aaKnown RBP8.43□□□□□ -1.06
PDZRN3-209ENST00000484487 MPRIPQ6WCQ1 1025 aa8.43□□□□□ -1.06
PDZRN3-209ENST00000484487 IL17REQ8NFR9 667 aa8.43□□□□□ -1.06
PDZRN3-209ENST00000484487 CDCA7LQ96GN5 454 aa8.43□□□□□ -1.06
PDZRN3-209ENST00000484487 LAS1LQ9Y4W2 734 aaKnown RBP8.43□□□□□ -1.06
PDZRN3-209ENST00000484487 MRC1P22897 1456 aa8.43□□□□□ -1.06
PDZRN3-209ENST00000484487 TOGARAM1Q9Y4F4 1720 aa8.43□□□□□ -1.06
PDZRN3-209ENST00000484487 A0A0G2JS52 829 aa8.42□□□□□ -1.06
PDZRN3-209ENST00000484487 CT47B1P0C2W7 299 aaPredicted RBP8.42□□□□□ -1.06
PDZRN3-209ENST00000484487 ZNF853P0CG23 659 aa8.42□□□□□ -1.06
PDZRN3-209ENST00000484487 MYT1Q01538 1121 aa8.42□□□□□ -1.06
PDZRN3-209ENST00000484487 THUMPD2Q9BTF0 503 aaKnown RBP8.42□□□□□ -1.06
PDZRN3-209ENST00000484487 CHMP4AQ9BY43 222 aa8.42□□□□□ -1.06
PDZRN3-209ENST00000484487 UBR2Q8IWV8 1755 aa8.41□□□□□ -1.06
PDZRN3-209ENST00000484487 KDM6AO15550 1401 aaPredicted RBP8.41□□□□□ -1.06
PDZRN3-209ENST00000484487 SOS1Q07889 1333 aaPredicted RBP8.41□□□□□ -1.06
PDZRN3-209ENST00000484487 FANCIQ9NVI1 1328 aa8.41□□□□□ -1.06
PDZRN3-209ENST00000484487 CHL1O00533 1208 aa8.41□□□□□ -1.06
PDZRN3-209ENST00000484487 POTEIP0CG38 1075 aa8.41□□□□□ -1.06
PDZRN3-209ENST00000484487 CABP4P57796 275 aa8.41□□□□□ -1.06
PDZRN3-209ENST00000484487 DUSP27Q5VZP5 1158 aa8.41□□□□□ -1.06
PDZRN3-209ENST00000484487 SLC52A2Q9HAB3 445 aa8.41□□□□□ -1.06
PDZRN3-209ENST00000484487 LGR6Q9HBX8 967 aa8.41□□□□□ -1.06
PDZRN3-209ENST00000484487 TSPYL4Q9UJ04 414 aa8.41□□□□□ -1.06
PDZRN3-209ENST00000484487 PAPPAQ13219 1627 aa8.4□□□□□ -1.06
PDZRN3-209ENST00000484487 BTBD11A6QL63 1104 aa8.4□□□□□ -1.06
PDZRN3-209ENST00000484487 RXRBP28702 533 aa8.4□□□□□ -1.06
PDZRN3-209ENST00000484487 NUBP1P53384 320 aa8.4□□□□□ -1.06
PDZRN3-209ENST00000484487 ZNF428Q96B54 188 aa8.4□□□□□ -1.06
PDZRN3-209ENST00000484487 MS4A3Q96HJ5 214 aa8.4□□□□□ -1.06
PDZRN3-209ENST00000484487 NHSQ6T4R5 1651 aa8.4□□□□□ -1.07
PDZRN3-209ENST00000484487 SEPT12Q8IYM1 358 aa8.39□□□□□ -1.07
PDZRN3-209ENST00000484487 NFATC2IPQ8NCF5 419 aa8.39□□□□□ -1.07
PDZRN3-209ENST00000484487 MBIPQ9NS73 344 aa8.39□□□□□ -1.07
PDZRN3-209ENST00000484487 TMOD3Q9NYL9 352 aa8.39□□□□□ -1.07
PDZRN3-209ENST00000484487 LAMB4A4D0S4 1761 aa8.39□□□□□ -1.07
PDZRN3-209ENST00000484487 BCL9O00512 1426 aa8.38□□□□□ -1.07
PDZRN3-209ENST00000484487 BTAF1O14981 1849 aa8.38□□□□□ -1.07
PDZRN3-209ENST00000484487 EXOSC9Q06265 439 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms