RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 NANOS1Q8WY41 292 aaKnown RBP10.36□□□□□ -0.75
CCDC66-219ENST00000484441 IRF7Q92985 503 aa10.36□□□□□ -0.75
CCDC66-219ENST00000484441 ZSCAN10Q96SZ4 725 aaPredicted RBP10.36□□□□□ -0.75
CCDC66-219ENST00000484441 ZBTB7BO15156 539 aaPredicted RBP10.35□□□□□ -0.75
CCDC66-219ENST00000484441 RHOQP17081 205 aa10.35□□□□□ -0.75
CCDC66-219ENST00000484441 ITGA6P23229 1130 aa10.35□□□□□ -0.75
CCDC66-219ENST00000484441 ATP1A2P50993 1020 aa10.35□□□□□ -0.75
CCDC66-219ENST00000484441 POU4F2Q12837 409 aa10.35□□□□□ -0.75
CCDC66-219ENST00000484441 TLR1Q15399 786 aa10.35□□□□□ -0.75
CCDC66-219ENST00000484441 TAS1R3Q7RTX0 852 aa10.35□□□□□ -0.75
CCDC66-219ENST00000484441 PPARGC1BQ86YN6 1023 aaKnown RBP10.35□□□□□ -0.75
CCDC66-219ENST00000484441 MKRN1Q9UHC7 482 aaKnown RBP10.35□□□□□ -0.75
CCDC66-219ENST00000484441 KIAA1024Q9UPX6 916 aa10.35□□□□□ -0.75
CCDC66-219ENST00000484441 CFAP70Q5T0N1 1121 aa10.34□□□□□ -0.75
CCDC66-219ENST00000484441 ZNF295-AS1Q8N0V1 137 aa10.34□□□□□ -0.75
CCDC66-219ENST00000484441 DYRK1BQ9Y463 629 aa10.34□□□□□ -0.75
CCDC66-219ENST00000484441 DKK1O94907 266 aa10.33□□□□□ -0.76
CCDC66-219ENST00000484441 SMTNP53814 917 aa10.33□□□□□ -0.76
CCDC66-219ENST00000484441 SIX5Q8N196 739 aa10.33□□□□□ -0.76
CCDC66-219ENST00000484441 LARGE2Q8N3Y3 721 aa10.33□□□□□ -0.76
CCDC66-219ENST00000484441 OGFOD1Q8N543 542 aa10.33□□□□□ -0.76
CCDC66-219ENST00000484441 KANK4Q5T7N3 995 aaPredicted RBP10.32□□□□□ -0.76
CCDC66-219ENST00000484441 RHBDD1Q8TEB9 315 aa10.32□□□□□ -0.76
CCDC66-219ENST00000484441 ZNF358Q9NW07 568 aa10.32□□□□□ -0.76
CCDC66-219ENST00000484441 IQSEC3Q9UPP2 1182 aaPredicted RBP10.32□□□□□ -0.76
CCDC66-219ENST00000484441 EPHA4P54764 986 aa10.31□□□□□ -0.76
CCDC66-219ENST00000484441 C4orf17Q53FE4 359 aa10.31□□□□□ -0.76
CCDC66-219ENST00000484441 DNAAF2Q9NVR5 837 aaKnown RBP10.31□□□□□ -0.76
CCDC66-219ENST00000484441 A6NJY4 79 aa10.3□□□□□ -0.76
CCDC66-219ENST00000484441 BACH1O14867 736 aa10.3□□□□□ -0.76
CCDC66-219ENST00000484441 PSME1Q06323 249 aa10.3□□□□□ -0.76
CCDC66-219ENST00000484441 GNASQ5JWF2 1037 aa10.3□□□□□ -0.76
CCDC66-219ENST00000484441 CCDC102BQ68D86 513 aa10.3□□□□□ -0.76
CCDC66-219ENST00000484441 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCDC66-219ENST00000484441 M0R2N6 131 aa10.29□□□□□ -0.76
CCDC66-219ENST00000484441 GMPRP36959 345 aa10.29□□□□□ -0.76
CCDC66-219ENST00000484441 TMEM214Q6NUQ4 689 aaKnown RBP10.29□□□□□ -0.76
CCDC66-219ENST00000484441 TPCN2Q8NHX9 752 aa10.29□□□□□ -0.76
CCDC66-219ENST00000484441 CUEDC1Q9NWM3 386 aaPredicted RBP10.29□□□□□ -0.76
CCDC66-219ENST00000484441 SERTAD1Q9UHV2 236 aa10.29□□□□□ -0.76
CCDC66-219ENST00000484441 FAM196BA6NMK8 535 aa10.28□□□□□ -0.76
CCDC66-219ENST00000484441 CDK2AP1O14519 115 aa10.28□□□□□ -0.76
CCDC66-219ENST00000484441 GTF2E1P29083 439 aaPredicted RBP10.28□□□□□ -0.76
CCDC66-219ENST00000484441 LMOD1P29536 600 aaPredicted RBP10.28□□□□□ -0.76
CCDC66-219ENST00000484441 FOXK2Q01167 660 aa10.28□□□□□ -0.76
CCDC66-219ENST00000484441 GMCL1Q96IK5 515 aa10.28□□□□□ -0.76
CCDC66-219ENST00000484441 TIMMDC1Q9NPL8 285 aa10.28□□□□□ -0.76
CCDC66-219ENST00000484441 SCHIP1Q9P0W5 487 aaPredicted RBP10.28□□□□□ -0.76
CCDC66-219ENST00000484441 USP3Q9Y6I4 520 aa10.28□□□□□ -0.76
CCDC66-219ENST00000484441 A0A1B0GTH6 734 aa10.27□□□□□ -0.77
CCDC66-219ENST00000484441 PTK7Q13308 1070 aa10.27□□□□□ -0.77
CCDC66-219ENST00000484441 TRIM22Q8IYM9 498 aa10.27□□□□□ -0.77
CCDC66-219ENST00000484441 RASA1P20936 1047 aa10.26□□□□□ -0.77
CCDC66-219ENST00000484441 CRTC2Q53ET0 693 aaPredicted RBP10.26□□□□□ -0.77
CCDC66-219ENST00000484441 GPR161Q8N6U8 529 aaKnown RBP10.26□□□□□ -0.77
CCDC66-219ENST00000484441 ZNF837Q96EG3 531 aaPredicted RBP10.26□□□□□ -0.77
CCDC66-219ENST00000484441 F11P03951 625 aa10.25□□□□□ -0.77
CCDC66-219ENST00000484441 PHKA2P46019 1235 aa10.25□□□□□ -0.77
CCDC66-219ENST00000484441 ZNF594Q96JF6 807 aaPredicted RBP10.25□□□□□ -0.77
CCDC66-219ENST00000484441 NIFKQ9BYG3 293 aaKnown RBP10.25□□□□□ -0.77
CCDC66-219ENST00000484441 SV2AQ7L0J3 742 aa10.24□□□□□ -0.77
CCDC66-219ENST00000484441 C14orf37Q86TY3 774 aa10.24□□□□□ -0.77
CCDC66-219ENST00000484441 VWA5B2Q8N398 1253 aa10.24□□□□□ -0.77
CCDC66-219ENST00000484441 VRTNQ9H8Y1 702 aa10.24□□□□□ -0.77
CCDC66-219ENST00000484441 USP17L15C9J2P7 530 aa10.23□□□□□ -0.77
CCDC66-219ENST00000484441 USP17L10C9JJH3 530 aa10.23□□□□□ -0.77
CCDC66-219ENST00000484441 USP17L13C9JLJ4 530 aa10.23□□□□□ -0.77
CCDC66-219ENST00000484441 USP17L12C9JPN9 530 aa10.23□□□□□ -0.77
CCDC66-219ENST00000484441 USP17L11C9JVI0 530 aa10.23□□□□□ -0.77
CCDC66-219ENST00000484441 USP17L21D6R901 530 aa10.23□□□□□ -0.77
CCDC66-219ENST00000484441 USP17L18D6R9N7 530 aa10.23□□□□□ -0.77
CCDC66-219ENST00000484441 USP17L22D6RA61 530 aa10.23□□□□□ -0.77
CCDC66-219ENST00000484441 USP17L17D6RBQ6 530 aa10.23□□□□□ -0.77
CCDC66-219ENST00000484441 USP17L19D6RCP7 530 aa10.23□□□□□ -0.77
CCDC66-219ENST00000484441 USP17L20D6RJB6 530 aa10.23□□□□□ -0.77
CCDC66-219ENST00000484441 THBS1P07996 1170 aa10.23□□□□□ -0.77
CCDC66-219ENST00000484441 SRPK2P78362 688 aaKnown RBP10.23□□□□□ -0.77
CCDC66-219ENST00000484441 USP17L24Q0WX57 530 aa10.23□□□□□ -0.77
CCDC66-219ENST00000484441 DBN1Q16643 649 aa10.23□□□□□ -0.77
CCDC66-219ENST00000484441 POTEAQ6S8J7 498 aa10.23□□□□□ -0.77
CCDC66-219ENST00000484441 CDC14CA4D256 554 aa10.22□□□□□ -0.77
CCDC66-219ENST00000484441 H7C1W4 665 aa10.22□□□□□ -0.77
CCDC66-219ENST00000484441 PLA2G4AP47712 749 aa10.22□□□□□ -0.77
CCDC66-219ENST00000484441 KRT76Q01546 638 aa10.22□□□□□ -0.77
CCDC66-219ENST00000484441 LARP1Q6PKG0 1096 aaKnown RBP10.22□□□□□ -0.77
CCDC66-219ENST00000484441 ARXQ96QS3 562 aa10.22□□□□□ -0.77
CCDC66-219ENST00000484441 GAS2L1Q99501 681 aaPredicted RBP10.22□□□□□ -0.77
CCDC66-219ENST00000484441 SFI1A8K8P3 1242 aa10.21□□□□□ -0.77
CCDC66-219ENST00000484441 ATP4AP20648 1035 aa10.21□□□□□ -0.77
CCDC66-219ENST00000484441 LBRQ14739 615 aaKnown RBP10.21□□□□□ -0.77
CCDC66-219ENST00000484441 SLC9A9Q8IVB4 645 aa10.21□□□□□ -0.77
CCDC66-219ENST00000484441 TNS4Q8IZW8 715 aa10.21□□□□□ -0.77
CCDC66-219ENST00000484441 C1orf216Q8TAB5 229 aa10.21□□□□□ -0.77
CCDC66-219ENST00000484441 CRISPLD1Q9H336 500 aa10.21□□□□□ -0.77
CCDC66-219ENST00000484441 LORP23490 312 aaPredicted RBP10.2□□□□□ -0.78
CCDC66-219ENST00000484441 MSX1P28360 303 aa10.2□□□□□ -0.78
CCDC66-219ENST00000484441 SEC13P55735 322 aa10.2□□□□□ -0.78
CCDC66-219ENST00000484441 UBAP2LQ14157 1087 aaKnown RBP10.2□□□□□ -0.78
CCDC66-219ENST00000484441 TEAD4Q15561 434 aa10.2□□□□□ -0.78
CCDC66-219ENST00000484441 RIPOR1Q6ZS17 1223 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms