RNA–Protein interactions for RNA: ENST00000484404.1

ITGA4-210, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-210ENST00000484404 ATG3Q9NT62 314 aa18.63■□□□□ 0.57
ITGA4-210ENST00000484404 ZNF831Q5JPB2 1677 aa18.63■□□□□ 0.57
ITGA4-210ENST00000484404 POLD1P28340 1107 aa18.62■□□□□ 0.57
ITGA4-210ENST00000484404 ITPK1Q13572 414 aa18.62■□□□□ 0.57
ITGA4-210ENST00000484404 SLC16A10Q8TF71 515 aa18.62■□□□□ 0.57
ITGA4-210ENST00000484404 PLEKHG2Q9H7P9 1386 aa18.62■□□□□ 0.57
ITGA4-210ENST00000484404 C4AP0C0L4 1744 aa18.62■□□□□ 0.57
ITGA4-210ENST00000484404 MYH14Q7Z406 1995 aaKnown RBP18.62■□□□□ 0.57
ITGA4-210ENST00000484404 DCAF8L1A6NGE4 600 aa18.61■□□□□ 0.57
ITGA4-210ENST00000484404 ATP6V1AP38606 617 aa18.61■□□□□ 0.57
ITGA4-210ENST00000484404 AMOTQ4VCS5 1084 aa18.61■□□□□ 0.57
ITGA4-210ENST00000484404 DCAF5Q96JK2 942 aa18.61■□□□□ 0.57
ITGA4-210ENST00000484404 RBM42Q9BTD8 480 aaKnown RBP18.61■□□□□ 0.57
ITGA4-210ENST00000484404 DIAPH1O60610 1272 aaKnown RBP18.59■□□□□ 0.57
ITGA4-210ENST00000484404 HSP90AB1P08238 724 aaKnown RBP18.59■□□□□ 0.57
ITGA4-210ENST00000484404 CABP4P57796 275 aa18.59■□□□□ 0.57
ITGA4-210ENST00000484404 ERVV-2B6SEH9 535 aa18.58■□□□□ 0.56
ITGA4-210ENST00000484404 GNPATO15228 680 aa18.58■□□□□ 0.56
ITGA4-210ENST00000484404 YY1P25490 414 aa18.58■□□□□ 0.56
ITGA4-210ENST00000484404 PELP1Q8IZL8 1130 aaKnown RBP18.58■□□□□ 0.56
ITGA4-210ENST00000484404 NLGN2Q8NFZ4 835 aa18.58■□□□□ 0.56
ITGA4-210ENST00000484404 NPC1L1Q9UHC9 1359 aa18.57■□□□□ 0.56
ITGA4-210ENST00000484404 ADAMTS7Q9UKP4 1686 aa18.57■□□□□ 0.56
ITGA4-210ENST00000484404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.57■□□□□ 0.56
ITGA4-210ENST00000484404 U2SURPO15042 1029 aaKnown RBP18.57■□□□□ 0.56
ITGA4-210ENST00000484404 SLC4A9Q96Q91 983 aa18.57■□□□□ 0.56
ITGA4-210ENST00000484404 MAP3K5Q99683 1374 aa18.55■□□□□ 0.56
ITGA4-210ENST00000484404 SIPA1L3O60292 1781 aaPredicted RBP18.55■□□□□ 0.56
ITGA4-210ENST00000484404 PTCD1O75127 700 aaKnown RBP18.55■□□□□ 0.56
ITGA4-210ENST00000484404 NFATC2IPQ8NCF5 419 aa18.55■□□□□ 0.56
ITGA4-210ENST00000484404 CICQ96RK0 1608 aaPredicted RBP18.55■□□□□ 0.56
ITGA4-210ENST00000484404 MRC1P22897 1456 aa18.54■□□□□ 0.56
ITGA4-210ENST00000484404 LGR6Q9HBX8 967 aa18.54■□□□□ 0.56
ITGA4-210ENST00000484404 UBR2Q8IWV8 1755 aa18.54■□□□□ 0.56
ITGA4-210ENST00000484404 MTHFSDQ2M296 383 aaKnown RBP18.53■□□□□ 0.56
ITGA4-210ENST00000484404 AKAP4Q5JQC9 854 aa18.53■□□□□ 0.56
ITGA4-210ENST00000484404 FLAD1Q8NFF5 587 aa18.53■□□□□ 0.56
ITGA4-210ENST00000484404 SSFA2P28290 1259 aa18.52■□□□□ 0.56
ITGA4-210ENST00000484404 N4BP2Q86UW6 1770 aaPredicted RBP18.52■□□□□ 0.55
ITGA4-210ENST00000484404 GPR162Q16538 588 aa18.51■□□□□ 0.55
ITGA4-210ENST00000484404 RNMTO43148 476 aaKnown RBP18.5■□□□□ 0.55
ITGA4-210ENST00000484404 WWC3Q9ULE0 1092 aa18.5■□□□□ 0.55
ITGA4-210ENST00000484404 DLG5Q8TDM6 1919 aa18.5■□□□□ 0.55
ITGA4-210ENST00000484404 UTRNP46939 3433 aa18.5■□□□□ 0.55
ITGA4-210ENST00000484404 KCPQ6ZWJ8 1503 aa18.49■□□□□ 0.55
ITGA4-210ENST00000484404 SLC39A6Q13433 755 aa18.49■□□□□ 0.55
ITGA4-210ENST00000484404 SLC52A2Q9HAB3 445 aa18.49■□□□□ 0.55
ITGA4-210ENST00000484404 KIAA1551Q9HCM1 1747 aa18.49■□□□□ 0.55
ITGA4-210ENST00000484404 PPP2R1AP30153 589 aa18.48■□□□□ 0.55
ITGA4-210ENST00000484404 RTCBQ9Y3I0 505 aaKnown RBP18.48■□□□□ 0.55
ITGA4-210ENST00000484404 KIF13BQ9NQT8 1826 aa18.48■□□□□ 0.55
ITGA4-210ENST00000484404 GOLGB1Q14789 3259 aaKnown RBP18.47■□□□□ 0.55
ITGA4-210ENST00000484404 HMGB2P26583 209 aaKnown RBP18.47■□□□□ 0.55
ITGA4-210ENST00000484404 CFAP53Q96M91 514 aa18.47■□□□□ 0.55
ITGA4-210ENST00000484404 CNTNAP4Q9C0A0 1308 aa18.46■□□□□ 0.55
ITGA4-210ENST00000484404 PRKAR2BP31323 418 aa18.45■□□□□ 0.54
ITGA4-210ENST00000484404 CRKLP46109 303 aaKnown RBP18.45■□□□□ 0.54
ITGA4-210ENST00000484404 YBX3P16989 372 aaKnown RBP eCLIP18.44■□□□□ 0.54
ITGA4-210ENST00000484404 TRAPPC3LQ5T215 181 aa18.44■□□□□ 0.54
ITGA4-210ENST00000484404 DNAJC10Q8IXB1 793 aa18.44■□□□□ 0.54
ITGA4-210ENST00000484404 ARHGEF1Q92888 912 aaKnown RBP18.44■□□□□ 0.54
ITGA4-210ENST00000484404 MMP10P09238 476 aa18.43■□□□□ 0.54
ITGA4-210ENST00000484404 PHACTR3Q96KR7 559 aa18.43■□□□□ 0.54
ITGA4-210ENST00000484404 SRP68Q9UHB9 627 aaKnown RBP18.43■□□□□ 0.54
ITGA4-210ENST00000484404 RPS6KA4O75676 772 aa18.42■□□□□ 0.54
ITGA4-210ENST00000484404 U2AF1L5P0DN76 240 aaPredicted RBP18.42■□□□□ 0.54
ITGA4-210ENST00000484404 U2AF1Q01081 240 aaKnown RBP eCLIP18.42■□□□□ 0.54
ITGA4-210ENST00000484404 RC3H1Q5TC82 1133 aaKnown RBP18.42■□□□□ 0.54
ITGA4-210ENST00000484404 RSPH6AQ9H0K4 717 aa18.42■□□□□ 0.54
ITGA4-210ENST00000484404 AFDNP55196 1824 aaKnown RBP18.42■□□□□ 0.54
ITGA4-210ENST00000484404 RFC4P35249 363 aa18.41■□□□□ 0.54
ITGA4-210ENST00000484404 GAS2L2Q8NHY3 880 aa18.41■□□□□ 0.54
ITGA4-210ENST00000484404 BRCA1P38398 1863 aaKnown RBP18.41■□□□□ 0.54
ITGA4-210ENST00000484404 GNAT3A8MTJ3 354 aa18.4■□□□□ 0.54
ITGA4-210ENST00000484404 CD2APQ9Y5K6 639 aa18.4■□□□□ 0.54
ITGA4-210ENST00000484404 GYS1P13807 737 aa18.39■□□□□ 0.53
ITGA4-210ENST00000484404 TEFQ10587 303 aa18.39■□□□□ 0.53
ITGA4-210ENST00000484404 IL17REQ8NFR9 667 aa18.39■□□□□ 0.53
ITGA4-210ENST00000484404 CCDC87Q9NVE4 849 aa18.39■□□□□ 0.53
ITGA4-210ENST00000484404 NUDCQ9Y266 331 aa18.39■□□□□ 0.53
ITGA4-210ENST00000484404 ADRA2BP18089 450 aa18.38■□□□□ 0.53
ITGA4-210ENST00000484404 INTS5Q6P9B9 1019 aaKnown RBP18.38■□□□□ 0.53
ITGA4-210ENST00000484404 TTC5Q8N0Z6 440 aa18.37■□□□□ 0.53
ITGA4-210ENST00000484404 PXDNLA1KZ92 1463 aa18.37■□□□□ 0.53
ITGA4-210ENST00000484404 SCN7AQ01118 1682 aa18.37■□□□□ 0.53
ITGA4-210ENST00000484404 CYP19A1P11511 503 aaPredicted RBP18.36■□□□□ 0.53
ITGA4-210ENST00000484404 C10orf71Q711Q0 1435 aa18.36■□□□□ 0.53
ITGA4-210ENST00000484404 ZNF784Q8NCA9 323 aaPredicted RBP18.36■□□□□ 0.53
ITGA4-210ENST00000484404 USP42Q9H9J4 1324 aaKnown RBP18.36■□□□□ 0.53
ITGA4-210ENST00000484404 ZBTB1Q9Y2K1 713 aa18.36■□□□□ 0.53
ITGA4-210ENST00000484404 COL15A1P39059 1388 aa18.35■□□□□ 0.53
ITGA4-210ENST00000484404 SOS1Q07889 1333 aaPredicted RBP18.35■□□□□ 0.53
ITGA4-210ENST00000484404 FKBP8Q14318 412 aa18.35■□□□□ 0.53
ITGA4-210ENST00000484404 MCM10Q7L590 875 aa18.35■□□□□ 0.53
ITGA4-210ENST00000484404 NLGN1Q8N2Q7 840 aa18.35■□□□□ 0.53
ITGA4-210ENST00000484404 KCNQ3O43525 872 aa18.34■□□□□ 0.53
ITGA4-210ENST00000484404 DCTN1Q14203 1278 aa18.34■□□□□ 0.53
ITGA4-210ENST00000484404 ZNF496Q96IT1 587 aaPredicted RBP18.34■□□□□ 0.53
ITGA4-210ENST00000484404 PARP3Q9Y6F1 533 aa18.34■□□□□ 0.53
ITGA4-210ENST00000484404 CEMIPQ8WUJ3 1361 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms