RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 MPRIPQ6WCQ1 1025 aa8.46□□□□□ -1.06
NCL-209ENST00000484328 FAM196AQ6ZSG2 479 aa8.45□□□□□ -1.06
NCL-209ENST00000484328 MCM10Q7L590 875 aa8.45□□□□□ -1.06
NCL-209ENST00000484328 WWC1Q8IX03 1113 aa8.45□□□□□ -1.06
NCL-209ENST00000484328 LGR6Q9HBX8 967 aa8.45□□□□□ -1.06
NCL-209ENST00000484328 IL16Q14005 1332 aa8.45□□□□□ -1.06
NCL-209ENST00000484328 ZBED9Q6R2W3 1325 aa8.45□□□□□ -1.06
NCL-209ENST00000484328 TAF1LQ8IZX4 1826 aa8.45□□□□□ -1.06
NCL-209ENST00000484328 DCTN1Q14203 1278 aa8.44□□□□□ -1.06
NCL-209ENST00000484328 FAM182BQ5T319 152 aa8.44□□□□□ -1.06
NCL-209ENST00000484328 RTF1Q92541 710 aaKnown RBP8.44□□□□□ -1.06
NCL-209ENST00000484328 THUMPD2Q9BTF0 503 aaKnown RBP8.44□□□□□ -1.06
NCL-209ENST00000484328 SLC52A2Q9HAB3 445 aa8.44□□□□□ -1.06
NCL-209ENST00000484328 NUP188Q5SRE5 1749 aa8.43□□□□□ -1.06
NCL-209ENST00000484328 ZNF853P0CG23 659 aa8.43□□□□□ -1.06
NCL-209ENST00000484328 HNRNPUQ00839 825 aaKnown RBP eCLIP8.43□□□□□ -1.06
NCL-209ENST00000484328 NEUROD2Q15784 382 aa8.43□□□□□ -1.06
NCL-209ENST00000484328 WDR63Q8IWG1 891 aa8.43□□□□□ -1.06
NCL-209ENST00000484328 BABAM1Q9NWV8 329 aa8.43□□□□□ -1.06
NCL-209ENST00000484328 KCNQ2O43526 872 aa8.42□□□□□ -1.06
NCL-209ENST00000484328 PRIM1P49642 420 aaKnown RBP8.42□□□□□ -1.06
NCL-209ENST00000484328 CABP4P57796 275 aa8.42□□□□□ -1.06
NCL-209ENST00000484328 CALD1Q05682 793 aaKnown RBP8.42□□□□□ -1.06
NCL-209ENST00000484328 TEFQ10587 303 aa8.42□□□□□ -1.06
NCL-209ENST00000484328 PTF1AQ7RTS3 328 aa8.42□□□□□ -1.06
NCL-209ENST00000484328 PIGBQ92521 554 aa8.42□□□□□ -1.06
NCL-209ENST00000484328 BCL11BQ9C0K0 894 aaPredicted RBP8.42□□□□□ -1.06
NCL-209ENST00000484328 IFT57Q9NWB7 429 aa8.42□□□□□ -1.06
NCL-209ENST00000484328 TMOD3Q9NYL9 352 aa8.42□□□□□ -1.06
NCL-209ENST00000484328 HEG1Q9ULI3 1381 aa8.42□□□□□ -1.06
NCL-209ENST00000484328 QSER1Q2KHR3 1735 aa8.41□□□□□ -1.06
NCL-209ENST00000484328 PALLDQ8WX93 1383 aa8.41□□□□□ -1.06
NCL-209ENST00000484328 SENP3-EIF4A1A0A087X0R7 540 aa8.41□□□□□ -1.06
NCL-209ENST00000484328 CHL1O00533 1208 aa8.41□□□□□ -1.06
NCL-209ENST00000484328 TAF7Q15545 349 aaPredicted RBP8.41□□□□□ -1.06
NCL-209ENST00000484328 NFATC2IPQ8NCF5 419 aa8.41□□□□□ -1.06
NCL-209ENST00000484328 ACSBG1Q96GR2 724 aa8.41□□□□□ -1.06
NCL-209ENST00000484328 CFAP44Q96MT7 982 aa8.41□□□□□ -1.06
NCL-209ENST00000484328 TRMT2AQ8IZ69 625 aaKnown RBP8.4□□□□□ -1.06
NCL-209ENST00000484328 SPINK5Q9NQ38 1064 aaPredicted RBP8.4□□□□□ -1.06
NCL-209ENST00000484328 TUBGCP6Q96RT7 1819 aa8.4□□□□□ -1.07
NCL-209ENST00000484328 C4BP0C0L5 1744 aa8.4□□□□□ -1.07
NCL-209ENST00000484328 FANCIQ9NVI1 1328 aa8.39□□□□□ -1.07
NCL-209ENST00000484328 DCAF8L1A6NGE4 600 aa8.39□□□□□ -1.07
NCL-209ENST00000484328 BTBD11A6QL63 1104 aa8.39□□□□□ -1.07
NCL-209ENST00000484328 TRIM37O94972 964 aa8.39□□□□□ -1.07
NCL-209ENST00000484328 GNAI1P63096 354 aa8.39□□□□□ -1.07
NCL-209ENST00000484328 GOLGA2Q08379 1002 aa8.39□□□□□ -1.07
NCL-209ENST00000484328 ZNF790Q6PG37 636 aa8.39□□□□□ -1.07
NCL-209ENST00000484328 ILDR2Q71H61 639 aa8.39□□□□□ -1.07
NCL-209ENST00000484328 SYTL4Q96C24 671 aaPredicted RBP8.39□□□□□ -1.07
NCL-209ENST00000484328 ATG3Q9NT62 314 aa8.39□□□□□ -1.07
NCL-209ENST00000484328 SALL2Q9Y467 1007 aaPredicted RBP8.39□□□□□ -1.07
NCL-209ENST00000484328 KAT6BQ8WYB5 2073 aa8.39□□□□□ -1.07
NCL-209ENST00000484328 UBR3Q6ZT12 1888 aa8.38□□□□□ -1.07
NCL-209ENST00000484328 C4AP0C0L4 1744 aa8.38□□□□□ -1.07
NCL-209ENST00000484328 E9PSI1 815 aa8.38□□□□□ -1.07
NCL-209ENST00000484328 SLFN5Q08AF3 891 aa8.38□□□□□ -1.07
NCL-209ENST00000484328 SMARCC1Q92922 1105 aaPredicted RBP8.38□□□□□ -1.07
NCL-209ENST00000484328 MBIPQ9NS73 344 aa8.38□□□□□ -1.07
NCL-209ENST00000484328 TSPYL4Q9UJ04 414 aa8.38□□□□□ -1.07
NCL-209ENST00000484328 ASAP1Q9ULH1 1129 aa8.38□□□□□ -1.07
NCL-209ENST00000484328 SOS1Q07889 1333 aaPredicted RBP8.37□□□□□ -1.07
NCL-209ENST00000484328 PLSCR1O15162 318 aa8.37□□□□□ -1.07
NCL-209ENST00000484328 KCNQ3O43525 872 aa8.37□□□□□ -1.07
NCL-209ENST00000484328 EIF4A1P60842 406 aaKnown RBP8.37□□□□□ -1.07
NCL-209ENST00000484328 SLC39A6Q13433 755 aa8.37□□□□□ -1.07
NCL-209ENST00000484328 DUSP27Q5VZP5 1158 aa8.37□□□□□ -1.07
NCL-209ENST00000484328 CCDC125Q86Z20 511 aa8.37□□□□□ -1.07
NCL-209ENST00000484328 VSIG10Q8N0Z9 540 aa8.37□□□□□ -1.07
NCL-209ENST00000484328 ZNF496Q96IT1 587 aaPredicted RBP8.37□□□□□ -1.07
NCL-209ENST00000484328 SLC4A9Q96Q91 983 aa8.37□□□□□ -1.07
NCL-209ENST00000484328 MYH16Q9H6N6 1097 aa8.37□□□□□ -1.07
NCL-209ENST00000484328 BCORQ6W2J9 1755 aa8.37□□□□□ -1.07
NCL-209ENST00000484328 CACNA1FO60840 1977 aa8.37□□□□□ -1.07
NCL-209ENST00000484328 MYH14Q7Z406 1995 aaKnown RBP8.37□□□□□ -1.07
NCL-209ENST00000484328 SCN7AQ01118 1682 aa8.37□□□□□ -1.07
NCL-209ENST00000484328 N4BP2Q86UW6 1770 aaPredicted RBP8.36□□□□□ -1.07
NCL-209ENST00000484328 LOC102724428A0A0B4J2F2 783 aa8.36□□□□□ -1.07
NCL-209ENST00000484328 HOXB7P09629 217 aa8.36□□□□□ -1.07
NCL-209ENST00000484328 SIK1P57059 783 aa8.36□□□□□ -1.07
NCL-209ENST00000484328 TTC5Q8N0Z6 440 aa8.36□□□□□ -1.07
NCL-209ENST00000484328 TSR2Q969E8 191 aaKnown RBP8.36□□□□□ -1.07
NCL-209ENST00000484328 CDCA7LQ96GN5 454 aa8.36□□□□□ -1.07
NCL-209ENST00000484328 FMNL2Q96PY5 1086 aa8.36□□□□□ -1.07
NCL-209ENST00000484328 MIS18AQ9NYP9 233 aa8.36□□□□□ -1.07
NCL-209ENST00000484328 SLC27A3Q5K4L6 730 aa8.35□□□□□ -1.07
NCL-209ENST00000484328 UPF1Q92900 1129 aaKnown RBP eCLIP8.35□□□□□ -1.07
NCL-209ENST00000484328 GIGYF1O75420 1035 aaPredicted RBP8.34□□□□□ -1.07
NCL-209ENST00000484328 APBA3O96018 575 aa8.34□□□□□ -1.07
NCL-209ENST00000484328 SNRPA1P09661 255 aaKnown RBP8.34□□□□□ -1.07
NCL-209ENST00000484328 ITPK1Q13572 414 aa8.34□□□□□ -1.07
NCL-209ENST00000484328 KRT24Q2M2I5 525 aa8.34□□□□□ -1.07
NCL-209ENST00000484328 PROM2Q8N271 834 aa8.34□□□□□ -1.07
NCL-209ENST00000484328 C8orf58Q8NAV2 365 aa8.34□□□□□ -1.07
NCL-209ENST00000484328 YTHDC1Q96MU7 727 aaKnown RBP8.34□□□□□ -1.07
NCL-209ENST00000484328 CAMKK2Q96RR4 588 aa8.34□□□□□ -1.07
NCL-209ENST00000484328 LAS1LQ9Y4W2 734 aaKnown RBP8.34□□□□□ -1.07
NCL-209ENST00000484328 CNTNAP4Q9C0A0 1308 aa8.33□□□□□ -1.08
NCL-209ENST00000484328 CASZ1Q86V15 1759 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms