RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 TMOD3Q9NYL9 352 aa22.71■■□□□ 1.23
PCGF3-211ENST00000484141 CD2APQ9Y5K6 639 aa22.71■■□□□ 1.23
PCGF3-211ENST00000484141 PLEKHO1Q53GL0 409 aaPredicted RBP22.7■■□□□ 1.22
PCGF3-211ENST00000484141 ZNF530Q6P9A1 599 aaPredicted RBP22.7■■□□□ 1.22
PCGF3-211ENST00000484141 KDM6AO15550 1401 aaPredicted RBP22.7■■□□□ 1.22
PCGF3-211ENST00000484141 C4BP0C0L5 1744 aa22.7■■□□□ 1.22
PCGF3-211ENST00000484141 ZNF526Q8TF50 670 aaPredicted RBP22.69■■□□□ 1.22
PCGF3-211ENST00000484141 ATG3Q9NT62 314 aa22.69■■□□□ 1.22
PCGF3-211ENST00000484141 HMOX1P09601 288 aa22.68■■□□□ 1.22
PCGF3-211ENST00000484141 HSPA6P17066 643 aa22.68■■□□□ 1.22
PCGF3-211ENST00000484141 ITPK1Q13572 414 aa22.68■■□□□ 1.22
PCGF3-211ENST00000484141 LINC00116Q8NCU8 138 aa22.68■■□□□ 1.22
PCGF3-211ENST00000484141 LOC102724428A0A0B4J2F2 783 aa22.67■■□□□ 1.22
PCGF3-211ENST00000484141 SIK1P57059 783 aa22.67■■□□□ 1.22
PCGF3-211ENST00000484141 SMARCC1Q92922 1105 aaPredicted RBP22.67■■□□□ 1.22
PCGF3-211ENST00000484141 KDRP35968 1356 aa22.66■■□□□ 1.22
PCGF3-211ENST00000484141 FLAD1Q8NFF5 587 aa22.66■■□□□ 1.22
PCGF3-211ENST00000484141 ADCY9O60503 1353 aa22.65■■□□□ 1.22
PCGF3-211ENST00000484141 UBR3Q6ZT12 1888 aa22.65■■□□□ 1.22
PCGF3-211ENST00000484141 SLC4A9Q96Q91 983 aa22.65■■□□□ 1.22
PCGF3-211ENST00000484141 HMGB2P26583 209 aaKnown RBP22.64■■□□□ 1.21
PCGF3-211ENST00000484141 COL3A1P02461 1466 aaPredicted RBP22.63■■□□□ 1.21
PCGF3-211ENST00000484141 PHF14O94880 888 aa22.63■■□□□ 1.21
PCGF3-211ENST00000484141 AMOTQ4VCS5 1084 aa22.63■■□□□ 1.21
PCGF3-211ENST00000484141 DCAF5Q96JK2 942 aa22.63■■□□□ 1.21
PCGF3-211ENST00000484141 PLEKHG2Q9H7P9 1386 aa22.63■■□□□ 1.21
PCGF3-211ENST00000484141 ERVV-2B6SEH9 535 aa22.62■■□□□ 1.21
PCGF3-211ENST00000484141 ATP6V1AP38606 617 aa22.62■■□□□ 1.21
PCGF3-211ENST00000484141 NPC1L1Q9UHC9 1359 aa22.62■■□□□ 1.21
PCGF3-211ENST00000484141 DIAPH1O60610 1272 aaKnown RBP22.61■■□□□ 1.21
PCGF3-211ENST00000484141 AK7Q96M32 723 aa22.61■■□□□ 1.21
PCGF3-211ENST00000484141 WWC3Q9ULE0 1092 aa22.61■■□□□ 1.21
PCGF3-211ENST00000484141 SCN11AQ9UI33 1791 aa22.61■■□□□ 1.21
PCGF3-211ENST00000484141 VIRMAQ69YN4 1812 aaKnown RBP22.6■■□□□ 1.21
PCGF3-211ENST00000484141 C1orf141Q5JVX7 400 aa22.6■■□□□ 1.21
PCGF3-211ENST00000484141 RBM42Q9BTD8 480 aaKnown RBP22.6■■□□□ 1.21
PCGF3-211ENST00000484141 LGR6Q9HBX8 967 aa22.6■■□□□ 1.21
PCGF3-211ENST00000484141 HSP90AB1P08238 724 aaKnown RBP22.59■■□□□ 1.21
PCGF3-211ENST00000484141 CABP4P57796 275 aa22.59■■□□□ 1.21
PCGF3-211ENST00000484141 NFATC2IPQ8NCF5 419 aa22.59■■□□□ 1.21
PCGF3-211ENST00000484141 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.57■■□□□ 1.2
PCGF3-211ENST00000484141 MTHFSDQ2M296 383 aaKnown RBP22.57■■□□□ 1.2
PCGF3-211ENST00000484141 U2SURPO15042 1029 aaKnown RBP22.55■■□□□ 1.2
PCGF3-211ENST00000484141 GNPATO15228 680 aa22.55■■□□□ 1.2
PCGF3-211ENST00000484141 COL5A3P25940 1745 aaPredicted RBP22.54■■□□□ 1.2
PCGF3-211ENST00000484141 PTCD1O75127 700 aaKnown RBP22.54■■□□□ 1.2
PCGF3-211ENST00000484141 AKAP4Q5JQC9 854 aa22.54■■□□□ 1.2
PCGF3-211ENST00000484141 MYH14Q7Z406 1995 aaKnown RBP22.54■■□□□ 1.2
PCGF3-211ENST00000484141 KIF3CO14782 793 aa22.53■■□□□ 1.2
PCGF3-211ENST00000484141 RNMTO43148 476 aaKnown RBP22.52■■□□□ 1.2
PCGF3-211ENST00000484141 PPP2R1AP30153 589 aa22.51■■□□□ 1.19
PCGF3-211ENST00000484141 SLC39A6Q13433 755 aa22.51■■□□□ 1.19
PCGF3-211ENST00000484141 ZNF831Q5JPB2 1677 aa22.51■■□□□ 1.19
PCGF3-211ENST00000484141 TJP1Q07157 1748 aa22.51■■□□□ 1.19
PCGF3-211ENST00000484141 SSFA2P28290 1259 aa22.5■■□□□ 1.19
PCGF3-211ENST00000484141 SLC52A2Q9HAB3 445 aa22.49■■□□□ 1.19
PCGF3-211ENST00000484141 ADAMTS7Q9UKP4 1686 aa22.48■■□□□ 1.19
PCGF3-211ENST00000484141 APLP1P51693 650 aa22.47■■□□□ 1.19
PCGF3-211ENST00000484141 PHACTR3Q96KR7 559 aa22.47■■□□□ 1.19
PCGF3-211ENST00000484141 MRC1P22897 1456 aa22.46■■□□□ 1.19
PCGF3-211ENST00000484141 ARHGEF1Q92888 912 aaKnown RBP22.45■■□□□ 1.18
PCGF3-211ENST00000484141 RTCBQ9Y3I0 505 aaKnown RBP22.45■■□□□ 1.18
PCGF3-211ENST00000484141 CNTNAP4Q9C0A0 1308 aa22.45■■□□□ 1.18
PCGF3-211ENST00000484141 C4AP0C0L4 1744 aa22.44■■□□□ 1.18
PCGF3-211ENST00000484141 DNAJC10Q8IXB1 793 aa22.44■■□□□ 1.18
PCGF3-211ENST00000484141 RSPH6AQ9H0K4 717 aa22.44■■□□□ 1.18
PCGF3-211ENST00000484141 CICQ96RK0 1608 aaPredicted RBP22.43■■□□□ 1.18
PCGF3-211ENST00000484141 RPS6KA4O75676 772 aa22.43■■□□□ 1.18
PCGF3-211ENST00000484141 PRKAR2BP31323 418 aa22.43■■□□□ 1.18
PCGF3-211ENST00000484141 CRKLP46109 303 aaKnown RBP22.43■■□□□ 1.18
PCGF3-211ENST00000484141 TRAPPC3LQ5T215 181 aa22.43■■□□□ 1.18
PCGF3-211ENST00000484141 RC3H1Q5TC82 1133 aaKnown RBP22.43■■□□□ 1.18
PCGF3-211ENST00000484141 IL17REQ8NFR9 667 aa22.43■■□□□ 1.18
PCGF3-211ENST00000484141 KCPQ6ZWJ8 1503 aa22.42■■□□□ 1.18
PCGF3-211ENST00000484141 TOMM70O94826 608 aa22.42■■□□□ 1.18
PCGF3-211ENST00000484141 MMP10P09238 476 aa22.42■■□□□ 1.18
PCGF3-211ENST00000484141 INTS5Q6P9B9 1019 aaKnown RBP22.41■■□□□ 1.18
PCGF3-211ENST00000484141 CFAP53Q96M91 514 aa22.41■■□□□ 1.18
PCGF3-211ENST00000484141 PXDNLA1KZ92 1463 aa22.41■■□□□ 1.18
PCGF3-211ENST00000484141 SRP68Q9UHB9 627 aaKnown RBP22.4■■□□□ 1.18
PCGF3-211ENST00000484141 BCS1LQ9Y276 419 aa22.4■■□□□ 1.18
PCGF3-211ENST00000484141 U2AF1L5P0DN76 240 aaPredicted RBP22.39■■□□□ 1.17
PCGF3-211ENST00000484141 GYS1P13807 737 aa22.39■■□□□ 1.17
PCGF3-211ENST00000484141 U2AF1Q01081 240 aaKnown RBP eCLIP22.39■■□□□ 1.173e-6■□□□□ 10.4
PCGF3-211ENST00000484141 DNAJC5GQ8N7S2 189 aa22.39■■□□□ 1.17
PCGF3-211ENST00000484141 SIPA1L3O60292 1781 aaPredicted RBP22.39■■□□□ 1.17
PCGF3-211ENST00000484141 UBR2Q8IWV8 1755 aa22.38■■□□□ 1.17
PCGF3-211ENST00000484141 TGFB2P61812 414 aa22.38■■□□□ 1.17
PCGF3-211ENST00000484141 GNAT3A8MTJ3 354 aa22.37■■□□□ 1.17
PCGF3-211ENST00000484141 RFC4P35249 363 aa22.37■■□□□ 1.17
PCGF3-211ENST00000484141 ARHGAP27Q6ZUM4 889 aa22.37■■□□□ 1.17
PCGF3-211ENST00000484141 GAS2L2Q8NHY3 880 aa22.37■■□□□ 1.17
PCGF3-211ENST00000484141 A0A0G2JLW4 131 aa22.36■■□□□ 1.17
PCGF3-211ENST00000484141 CYP19A1P11511 503 aaPredicted RBP22.36■■□□□ 1.17
PCGF3-211ENST00000484141 NMRK2Q9NPI5 230 aa22.36■■□□□ 1.17
PCGF3-211ENST00000484141 KCNQ3O43525 872 aa22.35■■□□□ 1.17
PCGF3-211ENST00000484141 NUDCQ9Y266 331 aa22.35■■□□□ 1.17
PCGF3-211ENST00000484141 ADRA2BP18089 450 aa22.34■■□□□ 1.17
PCGF3-211ENST00000484141 CCDC87Q9NVE4 849 aa22.34■■□□□ 1.17
PCGF3-211ENST00000484141 KIAA1551Q9HCM1 1747 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms