RNA–Protein interactions for RNA: ENST00000484078.5

SUPT20H-217, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 1,876 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-217ENST00000484078 HPS5Q9UPZ3 1129 aa8.3□□□□□ -1.08
SUPT20H-217ENST00000484078 IVNS1ABPQ9Y6Y0 642 aa8.3□□□□□ -1.08
SUPT20H-217ENST00000484078 PREX1Q8TCU6 1659 aa8.3□□□□□ -1.08
SUPT20H-217ENST00000484078 RNF17Q9BXT8 1623 aaKnown RBP8.3□□□□□ -1.08
SUPT20H-217ENST00000484078 ADGRL2O95490 1459 aa8.3□□□□□ -1.08
SUPT20H-217ENST00000484078 ZBBXA8MT70 800 aa8.3□□□□□ -1.08
SUPT20H-217ENST00000484078 ITGAEP38570 1179 aa8.3□□□□□ -1.08
SUPT20H-217ENST00000484078 EIF4G2P78344 907 aaKnown RBP eCLIP8.3□□□□□ -1.08
SUPT20H-217ENST00000484078 FAM135AQ9P2D6 1515 aa8.29□□□□□ -1.08
SUPT20H-217ENST00000484078 ERBINQ96RT1 1412 aa8.29□□□□□ -1.08
SUPT20H-217ENST00000484078 SLAIN2Q9P270 581 aa8.29□□□□□ -1.08
SUPT20H-217ENST00000484078 NPATQ14207 1427 aa8.29□□□□□ -1.08
SUPT20H-217ENST00000484078 PTPRKQ15262 1439 aa8.29□□□□□ -1.08
SUPT20H-217ENST00000484078 KDM5DQ9BY66 1539 aa8.28□□□□□ -1.08
SUPT20H-217ENST00000484078 SOWAHBA6NEL2 793 aa8.28□□□□□ -1.08
SUPT20H-217ENST00000484078 HSPA2P54652 639 aa8.28□□□□□ -1.08
SUPT20H-217ENST00000484078 TMEM164Q5U3C3 297 aa8.28□□□□□ -1.08
SUPT20H-217ENST00000484078 FAM160A2Q8N612 972 aaPredicted RBP8.28□□□□□ -1.08
SUPT20H-217ENST00000484078 VRTNQ9H8Y1 702 aa8.28□□□□□ -1.08
SUPT20H-217ENST00000484078 RRBP1Q9P2E9 1410 aaKnown RBP8.28□□□□□ -1.08
SUPT20H-217ENST00000484078 USP17L3A6NCW0 530 aa8.28□□□□□ -1.08
SUPT20H-217ENST00000484078 USP17L4A6NCW7 530 aa8.28□□□□□ -1.08
SUPT20H-217ENST00000484078 USP17L2Q6R6M4 530 aa8.28□□□□□ -1.08
SUPT20H-217ENST00000484078 USP17L1Q7RTZ2 530 aa8.28□□□□□ -1.08
SUPT20H-217ENST00000484078 UHRF1BP1Q6BDS2 1440 aa8.27□□□□□ -1.08
SUPT20H-217ENST00000484078 CEP152O94986 1710 aa8.27□□□□□ -1.09
SUPT20H-217ENST00000484078 MROH1Q8NDA8 1641 aa8.27□□□□□ -1.09
SUPT20H-217ENST00000484078 JUNDP17535 347 aa8.27□□□□□ -1.09
SUPT20H-217ENST00000484078 CRTC2Q53ET0 693 aaPredicted RBP8.27□□□□□ -1.09
SUPT20H-217ENST00000484078 PCDHB3Q9Y5E6 796 aa8.27□□□□□ -1.09
SUPT20H-217ENST00000484078 ROCK1Q13464 1354 aa8.27□□□□□ -1.09
SUPT20H-217ENST00000484078 ZC3H13Q5T200 1668 aaKnown RBP8.27□□□□□ -1.09
SUPT20H-217ENST00000484078 ANKRD50Q9ULJ7 1429 aa8.26□□□□□ -1.09
SUPT20H-217ENST00000484078 CTHP32929 405 aa8.26□□□□□ -1.09
SUPT20H-217ENST00000484078 PPP4CP60510 307 aa8.26□□□□□ -1.09
SUPT20H-217ENST00000484078 KCNA1Q09470 495 aa8.26□□□□□ -1.09
SUPT20H-217ENST00000484078 TSGA10IPQ3SY00 556 aa8.26□□□□□ -1.09
SUPT20H-217ENST00000484078 PHLDB3Q6NSJ2 640 aa8.26□□□□□ -1.09
SUPT20H-217ENST00000484078 WBP1LQ9NX94 342 aa8.26□□□□□ -1.09
SUPT20H-217ENST00000484078 SALL2Q9Y467 1007 aaPredicted RBP8.26□□□□□ -1.09
SUPT20H-217ENST00000484078 ABCC3O15438 1527 aa8.26□□□□□ -1.09
SUPT20H-217ENST00000484078 KANK1Q14678 1352 aa8.26□□□□□ -1.09
SUPT20H-217ENST00000484078 USP17L5A8MUK1 530 aa8.26□□□□□ -1.09
SUPT20H-217ENST00000484078 SKIP12755 728 aa8.26□□□□□ -1.09
SUPT20H-217ENST00000484078 PTPRNQ16849 979 aa8.26□□□□□ -1.09
SUPT20H-217ENST00000484078 DEPDC5O75140 1603 aa8.25□□□□□ -1.09
SUPT20H-217ENST00000484078 PZPP20742 1482 aa8.25□□□□□ -1.09
SUPT20H-217ENST00000484078 TLL1O43897 1013 aa8.25□□□□□ -1.09
SUPT20H-217ENST00000484078 FMNL1O95466 1100 aaPredicted RBP8.25□□□□□ -1.09
SUPT20H-217ENST00000484078 KCNH2Q12809 1159 aa8.25□□□□□ -1.09
SUPT20H-217ENST00000484078 ANKK1Q8NFD2 765 aa8.25□□□□□ -1.09
SUPT20H-217ENST00000484078 PRDM15P57071 1507 aaPredicted RBP8.24□□□□□ -1.09
SUPT20H-217ENST00000484078 SCNN1AP37088 669 aa8.24□□□□□ -1.09
SUPT20H-217ENST00000484078 COPS2P61201 443 aa8.24□□□□□ -1.09
SUPT20H-217ENST00000484078 PNMA1Q8ND90 353 aa8.24□□□□□ -1.09
SUPT20H-217ENST00000484078 CAMSAP1Q5T5Y3 1602 aa8.24□□□□□ -1.09
SUPT20H-217ENST00000484078 TNRQ92752 1358 aa8.23□□□□□ -1.09
SUPT20H-217ENST00000484078 ANKRD13DQ6ZTN6 518 aa8.23□□□□□ -1.09
SUPT20H-217ENST00000484078 DXOO77932 396 aaKnown RBP8.23□□□□□ -1.09
SUPT20H-217ENST00000484078 PDE4CQ08493 712 aa8.23□□□□□ -1.09
SUPT20H-217ENST00000484078 NCOA4Q13772 614 aa8.23□□□□□ -1.09
SUPT20H-217ENST00000484078 CEP126Q9P2H0 1117 aa8.23□□□□□ -1.09
SUPT20H-217ENST00000484078 TSR3Q9UJK0 312 aaKnown RBP8.23□□□□□ -1.09
SUPT20H-217ENST00000484078 NOVA2Q9UNW9 492 aaKnown RBP8.23□□□□□ -1.09
SUPT20H-217ENST00000484078 MYO3AQ8NEV4 1616 aa8.23□□□□□ -1.09
SUPT20H-217ENST00000484078 VWDEQ8N2E2 1590 aa8.22□□□□□ -1.09
SUPT20H-217ENST00000484078 CCNYL3P0C7X3 344 aa8.22□□□□□ -1.09
SUPT20H-217ENST00000484078 PTCRAQ6ISU1 281 aaPredicted RBP8.22□□□□□ -1.09
SUPT20H-217ENST00000484078 WNT2BQ93097 391 aa8.22□□□□□ -1.09
SUPT20H-217ENST00000484078 STRCQ7RTU9 1775 aa8.22□□□□□ -1.09
SUPT20H-217ENST00000484078 ARHGAP31Q2M1Z3 1444 aa8.22□□□□□ -1.09
SUPT20H-217ENST00000484078 ZNF142P52746 1687 aaPredicted RBP8.22□□□□□ -1.09
SUPT20H-217ENST00000484078 LMTK2Q8IWU2 1503 aa8.22□□□□□ -1.09
SUPT20H-217ENST00000484078 PHTF2Q8N3S3 785 aa8.21□□□□□ -1.09
SUPT20H-217ENST00000484078 NUDT12Q9BQG2 462 aa8.21□□□□□ -1.09
SUPT20H-217ENST00000484078 PRR14Q9BWN1 585 aa8.21□□□□□ -1.09
SUPT20H-217ENST00000484078 EVA1BQ9NVM1 165 aa8.21□□□□□ -1.09
SUPT20H-217ENST00000484078 CEP170BQ9Y4F5 1589 aaPredicted RBP8.21□□□□□ -1.09
SUPT20H-217ENST00000484078 A2ML1A8K2U0 1454 aa8.21□□□□□ -1.09
SUPT20H-217ENST00000484078 NR1I2O75469 434 aa8.21□□□□□ -1.1
SUPT20H-217ENST00000484078 SPSB2Q99619 263 aa8.21□□□□□ -1.1
SUPT20H-217ENST00000484078 MKRN1Q9UHC7 482 aaKnown RBP8.21□□□□□ -1.1
SUPT20H-217ENST00000484078 ERVK-7P63135 1459 aa8.21□□□□□ -1.1
SUPT20H-217ENST00000484078 UNC13BO14795 1591 aa8.2□□□□□ -1.1
SUPT20H-217ENST00000484078 USP17L15C9J2P7 530 aa8.2□□□□□ -1.1
SUPT20H-217ENST00000484078 USP17L10C9JJH3 530 aa8.2□□□□□ -1.1
SUPT20H-217ENST00000484078 USP17L13C9JLJ4 530 aa8.2□□□□□ -1.1
SUPT20H-217ENST00000484078 USP17L12C9JPN9 530 aa8.2□□□□□ -1.1
SUPT20H-217ENST00000484078 USP17L11C9JVI0 530 aa8.2□□□□□ -1.1
SUPT20H-217ENST00000484078 USP17L21D6R901 530 aa8.2□□□□□ -1.1
SUPT20H-217ENST00000484078 USP17L18D6R9N7 530 aa8.2□□□□□ -1.1
SUPT20H-217ENST00000484078 USP17L22D6RA61 530 aa8.2□□□□□ -1.1
SUPT20H-217ENST00000484078 USP17L17D6RBQ6 530 aa8.2□□□□□ -1.1
SUPT20H-217ENST00000484078 USP17L19D6RCP7 530 aa8.2□□□□□ -1.1
SUPT20H-217ENST00000484078 USP17L20D6RJB6 530 aa8.2□□□□□ -1.1
SUPT20H-217ENST00000484078 USP17L24Q0WX57 530 aa8.2□□□□□ -1.1
SUPT20H-217ENST00000484078 NFATC2IPQ8NCF5 419 aa8.2□□□□□ -1.1
SUPT20H-217ENST00000484078 RBM25P49756 843 aaKnown RBP8.19□□□□□ -1.1
SUPT20H-217ENST00000484078 MMP16P51512 607 aa8.19□□□□□ -1.1
SUPT20H-217ENST00000484078 PTK7Q13308 1070 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms