RNA–Protein interactions for RNA: ENST00000483974.5

C4A-255, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-255	ENST00000483974	MTHFS	P49914	203 aa		28.04	■■■□□ 2.08
C4A-255	ENST00000483974	RALBP1	Q15311	655 aa		28.04	■■■□□ 2.08
C4A-255	ENST00000483974	PLEKHO1	Q53GL0	409 aa	Predicted RBP	28.04	■■■□□ 2.08
C4A-255	ENST00000483974	ERVV-2	B6SEH9	535 aa		28.03	■■■□□ 2.08
C4A-255	ENST00000483974	DCAF5	Q96JK2	942 aa		28.02	■■■□□ 2.08
C4A-255	ENST00000483974	SSFA2	P28290	1259 aa		28.01	■■■□□ 2.07
C4A-255	ENST00000483974	ZNF831	Q5JPB2	1677 aa		28	■■■□□ 2.07
C4A-255	ENST00000483974	MYBBP1A	Q9BQG0	1328 aa	Known RBP	27.99	■■■□□ 2.07
C4A-255	ENST00000483974	GOLGB1	Q14789	3259 aa	Known RBP	27.99	■■■□□ 2.07
C4A-255	ENST00000483974	ASAP1	Q9ULH1	1129 aa		27.99	■■■□□ 2.07
C4A-255	ENST00000483974	ANP32C	O43423	234 aa		27.98	■■■□□ 2.07
C4A-255	ENST00000483974	CD2AP	Q9Y5K6	639 aa		27.98	■■■□□ 2.07
C4A-255	ENST00000483974	ATP6V1A	P38606	617 aa		27.97	■■■□□ 2.07
C4A-255	ENST00000483974	MSL1	Q68DK7	614 aa		27.97	■■■□□ 2.07
C4A-255	ENST00000483974	MIER1	Q8N108	512 aa		27.97	■■■□□ 2.07
C4A-255	ENST00000483974	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	27.96	■■■□□ 2.07
C4A-255	ENST00000483974	ZNF784	Q8NCA9	323 aa	Predicted RBP	27.96	■■■□□ 2.07
C4A-255	ENST00000483974	ATG3	Q9NT62	314 aa		27.96	■■■□□ 2.07
C4A-255	ENST00000483974	GRIN3B	O60391	1043 aa		27.95	■■■□□ 2.06
C4A-255	ENST00000483974	C1orf141	Q5JVX7	400 aa		27.95	■■■□□ 2.06
C4A-255	ENST00000483974	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.95	■■■□□ 2.06
C4A-255	ENST00000483974	LINC00116	Q8NCU8	138 aa		27.95	■■■□□ 2.06
C4A-255	ENST00000483974	NLGN2	Q8NFZ4	835 aa		27.95	■■■□□ 2.06
C4A-255	ENST00000483974	KDR	P35968	1356 aa		27.94	■■■□□ 2.06
C4A-255	ENST00000483974	PHF14	O94880	888 aa		27.93	■■■□□ 2.06
C4A-255	ENST00000483974	PELP1	Q8IZL8	1130 aa	Known RBP	27.93	■■■□□ 2.06
C4A-255	ENST00000483974	GNPAT	O15228	680 aa		27.91	■■■□□ 2.06
C4A-255	ENST00000483974	CABP4	P57796	275 aa		27.91	■■■□□ 2.06
C4A-255	ENST00000483974	ITPK1	Q13572	414 aa		27.91	■■■□□ 2.06
C4A-255	ENST00000483974	IL13	P35225	146 aa		27.9	■■■□□ 2.06
C4A-255	ENST00000483974	SULT6B1	Q6IMI4	303 aa		27.9	■■■□□ 2.06
C4A-255	ENST00000483974	KDM6A	O15550	1401 aa	Predicted RBP	27.89	■■■□□ 2.06
C4A-255	ENST00000483974	COL5A3	P25940	1745 aa	Predicted RBP	27.88	■■■□□ 2.05
C4A-255	ENST00000483974	AMIGO3	Q86WK7	504 aa		27.88	■■■□□ 2.05
C4A-255	ENST00000483974	AEBP1	Q8IUX7	1158 aa		27.88	■■■□□ 2.05
C4A-255	ENST00000483974	SCN11A	Q9UI33	1791 aa		27.88	■■■□□ 2.05
C4A-255	ENST00000483974	ADRA2B	P18089	450 aa		27.87	■■■□□ 2.05
C4A-255	ENST00000483974	RC3H1	Q5TC82	1133 aa	Known RBP	27.87	■■■□□ 2.05
C4A-255	ENST00000483974	RTCB	Q9Y3I0	505 aa	Known RBP	27.87	■■■□□ 2.05
C4A-255	ENST00000483974	RBM42	Q9BTD8	480 aa	Known RBP	27.86	■■■□□ 2.05
C4A-255	ENST00000483974	TRAPPC3L	Q5T215	181 aa		27.84	■■■□□ 2.05
C4A-255	ENST00000483974	CNTNAP4	Q9C0A0	1308 aa		27.84	■■■□□ 2.05
C4A-255	ENST00000483974	VIRMA	Q69YN4	1812 aa	Known RBP	27.83	■■■□□ 2.05
C4A-255	ENST00000483974	MYH14	Q7Z406	1995 aa	Known RBP	27.82	■■■□□ 2.04
C4A-255	ENST00000483974	YBX3	P16989	372 aa	Known RBP eCLIP	27.82	■■■□□ 2.04
C4A-255	ENST00000483974	AKAP4	Q5JQC9	854 aa		27.82	■■■□□ 2.04
C4A-255	ENST00000483974	NLGN1	Q8N2Q7	840 aa		27.8	■■■□□ 2.04
C4A-255	ENST00000483974	NFATC2IP	Q8NCF5	419 aa		27.8	■■■□□ 2.04
C4A-255	ENST00000483974	SLC4A9	Q96Q91	983 aa		27.8	■■■□□ 2.04
C4A-255	ENST00000483974	CIC	Q96RK0	1608 aa	Predicted RBP	27.79	■■■□□ 2.04
C4A-255	ENST00000483974	DIAPH1	O60610	1272 aa	Known RBP	27.79	■■■□□ 2.04
C4A-255	ENST00000483974	RPS6KA4	O75676	772 aa		27.78	■■■□□ 2.04
C4A-255	ENST00000483974	SMIM5	Q71RC9	77 aa		27.78	■■■□□ 2.04
C4A-255	ENST00000483974	KIF13B	Q9NQT8	1826 aa		27.77	■■■□□ 2.04
C4A-255	ENST00000483974	RFC4	P35249	363 aa		27.76	■■■□□ 2.03
C4A-255	ENST00000483974	PTCD1	O75127	700 aa	Known RBP	27.75	■■■□□ 2.03
C4A-255	ENST00000483974	MMP10	P09238	476 aa		27.75	■■■□□ 2.03
C4A-255	ENST00000483974	CFAP53	Q96M91	514 aa		27.75	■■■□□ 2.03
C4A-255	ENST00000483974	ARHGEF1	Q92888	912 aa	Known RBP	27.74	■■■□□ 2.03
C4A-255	ENST00000483974	SLC52A2	Q9HAB3	445 aa		27.74	■■■□□ 2.03
C4A-255	ENST00000483974	MRS2	Q9HD23	443 aa		27.74	■■■□□ 2.03
C4A-255	ENST00000483974	C4A	P0C0L4	1744 aa		27.72	■■■□□ 2.03
C4A-255	ENST00000483974	MRC1	P22897	1456 aa		27.72	■■■□□ 2.03
C4A-255	ENST00000483974	HMOX1	P09601	288 aa		27.72	■■■□□ 2.03
C4A-255	ENST00000483974	U2SURP	O15042	1029 aa	Known RBP	27.71	■■■□□ 2.03
C4A-255	ENST00000483974	TJP1	Q07157	1748 aa		27.71	■■■□□ 2.03
C4A-255	ENST00000483974	PNISR	Q8TF01	805 aa	Known RBP	27.71	■■■□□ 2.03
C4A-255	ENST00000483974	CRKL	P46109	303 aa	Known RBP	27.7	■■■□□ 2.02
C4A-255	ENST00000483974	TGFB2	P61812	414 aa		27.7	■■■□□ 2.02
C4A-255	ENST00000483974	ADAMTS7	Q9UKP4	1686 aa		27.69	■■■□□ 2.02
C4A-255	ENST00000483974	CCER2	I3L3R5	266 aa		27.69	■■■□□ 2.02
C4A-255	ENST00000483974	RNMT	O43148	476 aa	Known RBP	27.69	■■■□□ 2.02
C4A-255	ENST00000483974	GYS1	P13807	737 aa		27.69	■■■□□ 2.02
C4A-255	ENST00000483974	GIGYF1	O75420	1035 aa	Predicted RBP	27.68	■■■□□ 2.02
C4A-255	ENST00000483974	C1QTNF8	P60827	252 aa		27.68	■■■□□ 2.02
C4A-255	ENST00000483974	CCDC87	Q9NVE4	849 aa		27.68	■■■□□ 2.02
C4A-255	ENST00000483974	PARP3	Q9Y6F1	533 aa		27.67	■■■□□ 2.02
C4A-255	ENST00000483974	MTHFSD	Q2M296	383 aa	Known RBP	27.66	■■■□□ 2.02
C4A-255	ENST00000483974	RSPH6A	Q9H0K4	717 aa		27.66	■■■□□ 2.02
C4A-255	ENST00000483974	LGR6	Q9HBX8	967 aa		27.66	■■■□□ 2.02
C4A-255	ENST00000483974	ADAMTS8	Q9UP79	889 aa		27.66	■■■□□ 2.02
C4A-255	ENST00000483974	U2AF1L5	P0DN76	240 aa	Predicted RBP	27.65	■■■□□ 2.02
C4A-255	ENST00000483974	U2AF1	Q01081	240 aa	Known RBP eCLIP	27.65	■■■□□ 2.02
C4A-255	ENST00000483974	C10orf71	Q711Q0	1435 aa		27.65	■■■□□ 2.02
C4A-255	ENST00000483974	DLG5	Q8TDM6	1919 aa		27.64	■■■□□ 2.02
C4A-255	ENST00000483974	N4BP2	Q86UW6	1770 aa	Predicted RBP	27.63	■■■□□ 2.01
C4A-255	ENST00000483974	VSIG10	Q8N0Z9	540 aa		27.63	■■■□□ 2.01
C4A-255	ENST00000483974	KIAA1551	Q9HCM1	1747 aa		27.63	■■■□□ 2.01
C4A-255	ENST00000483974	USP42	Q9H9J4	1324 aa	Known RBP	27.63	■■■□□ 2.01
C4A-255	ENST00000483974	PXDNL	A1KZ92	1463 aa		27.63	■■■□□ 2.01
C4A-255	ENST00000483974	GAS2L2	Q8NHY3	880 aa		27.62	■■■□□ 2.01
C4A-255	ENST00000483974	ATP10D	Q9P241	1426 aa		27.61	■■■□□ 2.01
C4A-255	ENST00000483974	BRCA1	P38398	1863 aa	Known RBP	27.61	■■■□□ 2.01
C4A-255	ENST00000483974	UBR2	Q8IWV8	1755 aa		27.6	■■■□□ 2.01
C4A-255	ENST00000483974	INTS5	Q6P9B9	1019 aa	Known RBP	27.6	■■■□□ 2.01
C4A-255	ENST00000483974	PHACTR3	Q96KR7	559 aa		27.6	■■■□□ 2.01
C4A-255	ENST00000483974	PLEKHF1	Q96S99	279 aa		27.6	■■■□□ 2.01
C4A-255	ENST00000483974	NUDC	Q9Y266	331 aa		27.6	■■■□□ 2.01
C4A-255	ENST00000483974	ADCY9	O60503	1353 aa		27.6	■■■□□ 2.01
C4A-255	ENST00000483974	ZPR1	O75312	459 aa		27.59	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms