RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 STX1AQ16623 288 aa11.89□□□□□ -0.51
COL12A1-207ENST00000483888 SPATS2LQ9NUQ6 558 aaKnown RBP11.89□□□□□ -0.51
COL12A1-207ENST00000483888 DNAI1Q9UI46 699 aa11.89□□□□□ -0.51
COL12A1-207ENST00000483888 PLEKHH1Q9ULM0 1364 aa11.88□□□□□ -0.51
COL12A1-207ENST00000483888 HDXQ7Z353 690 aa11.88□□□□□ -0.51
COL12A1-207ENST00000483888 FAM76AQ8TAV0 307 aa11.88□□□□□ -0.51
COL12A1-207ENST00000483888 CTAGE5O15320 804 aa11.88□□□□□ -0.51
COL12A1-207ENST00000483888 DNA2P51530 1060 aa11.88□□□□□ -0.51
COL12A1-207ENST00000483888 WHAMMP3Q1A5X7 153 aa11.88□□□□□ -0.51
COL12A1-207ENST00000483888 HIP1O00291 1037 aa11.88□□□□□ -0.51
COL12A1-207ENST00000483888 PDE1CQ14123 709 aaPredicted RBP11.88□□□□□ -0.51
COL12A1-207ENST00000483888 NUP88Q99567 741 aaPredicted RBP11.88□□□□□ -0.51
COL12A1-207ENST00000483888 SEPT11Q9NVA2 429 aaKnown RBP11.88□□□□□ -0.51
COL12A1-207ENST00000483888 FAM114A2Q9NRY5 505 aa11.88□□□□□ -0.51
COL12A1-207ENST00000483888 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.88□□□□□ -0.51
COL12A1-207ENST00000483888 SKILP12757 684 aa11.88□□□□□ -0.51
COL12A1-207ENST00000483888 LACTBP83111 547 aaPredicted RBP11.88□□□□□ -0.51
COL12A1-207ENST00000483888 SH2D4BQ5SQS7 431 aa11.88□□□□□ -0.51
COL12A1-207ENST00000483888 NECTIN2Q92692 538 aa11.88□□□□□ -0.51
COL12A1-207ENST00000483888 PPP6R1Q9UPN7 881 aa11.87□□□□□ -0.51
COL12A1-207ENST00000483888 CEP120Q8N960 986 aa11.87□□□□□ -0.51
COL12A1-207ENST00000483888 LUC7L2Q9Y383 392 aaKnown RBP11.87□□□□□ -0.51
COL12A1-207ENST00000483888 JADE2Q9NQC1 790 aa11.87□□□□□ -0.51
COL12A1-207ENST00000483888 FSD1Q9BTV5 496 aa11.87□□□□□ -0.51
COL12A1-207ENST00000483888 RNF216Q9NWF9 866 aaPredicted RBP11.87□□□□□ -0.51
COL12A1-207ENST00000483888 NOL7Q9UMY1 257 aaKnown RBP11.87□□□□□ -0.51
COL12A1-207ENST00000483888 GSTTP1A0A1W2PQM5 241 aa11.87□□□□□ -0.51
COL12A1-207ENST00000483888 NOL3O60936 208 aaKnown RBP11.87□□□□□ -0.51
COL12A1-207ENST00000483888 CCDC172P0C7W6 258 aa11.87□□□□□ -0.51
COL12A1-207ENST00000483888 AMOTL1Q8IY63 956 aa11.87□□□□□ -0.51
COL12A1-207ENST00000483888 VGFO15240 615 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-207ENST00000483888 DBN1Q16643 649 aa11.86□□□□□ -0.51
COL12A1-207ENST00000483888 AFAP1L1Q8TED9 768 aa11.86□□□□□ -0.51
COL12A1-207ENST00000483888 FKBP5Q13451 457 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-207ENST00000483888 ZSCAN26Q16670 478 aa11.86□□□□□ -0.51
COL12A1-207ENST00000483888 PDRG1Q9NUG6 133 aa11.86□□□□□ -0.51
COL12A1-207ENST00000483888 RIOK3O14730 519 aaKnown RBP11.86□□□□□ -0.51
COL12A1-207ENST00000483888 FYB1O15117 783 aa11.86□□□□□ -0.51
COL12A1-207ENST00000483888 MATR3P43243 847 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL12A1-207ENST00000483888 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL12A1-207ENST00000483888 PPP1R12CQ9BZL4 782 aa11.86□□□□□ -0.51
COL12A1-207ENST00000483888 ABCC8Q09428 1581 aa11.86□□□□□ -0.51
COL12A1-207ENST00000483888 USO1O60763 962 aaKnown RBP11.86□□□□□ -0.51
COL12A1-207ENST00000483888 PRIM1P49642 420 aaKnown RBP11.86□□□□□ -0.51
COL12A1-207ENST00000483888 CKAP4Q07065 602 aaKnown RBP11.86□□□□□ -0.51
COL12A1-207ENST00000483888 GDPD2Q9HCC8 539 aa11.86□□□□□ -0.51
COL12A1-207ENST00000483888 ADAMTS8Q9UP79 889 aa11.86□□□□□ -0.51
COL12A1-207ENST00000483888 CPLX4Q7Z7G2 160 aa11.86□□□□□ -0.51
COL12A1-207ENST00000483888 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 RLBP1P12271 317 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 ZNF165P49910 485 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 ALS2CR12Q96Q35 445 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 RAD21O60216 631 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 GBP1P32455 592 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 UBE2HP62256 183 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 MRFAP1L1Q96HT8 127 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 FAM160A1Q05DH4 1040 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 ZSCAN31Q96LW9 406 aaPredicted RBP11.85□□□□□ -0.51
COL12A1-207ENST00000483888 SCAND2PQ9GZW5 306 aaPredicted RBP11.85□□□□□ -0.51
COL12A1-207ENST00000483888 TAOK3Q9H2K8 898 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 CTAGE9A4FU28 777 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 PPP2R5AQ15172 486 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 MICAL1Q8TDZ2 1067 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 CTAGE15A4D2H0 777 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 CTAGE8P0CG41 777 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 CTAGE6Q86UF2 777 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 CTAGE4Q8IX94 777 aa11.85□□□□□ -0.51
COL12A1-207ENST00000483888 NOB1Q9ULX3 412 aaKnown RBP11.85□□□□□ -0.51
COL12A1-207ENST00000483888 PAF1Q8N7H5 531 aa11.84□□□□□ -0.51
COL12A1-207ENST00000483888 CCDC186Q7Z3E2 898 aa11.84□□□□□ -0.51
COL12A1-207ENST00000483888 ANKRD18BA2A2Z9 1011 aa11.84□□□□□ -0.51
COL12A1-207ENST00000483888 PIP4K2BP78356 416 aa11.84□□□□□ -0.51
COL12A1-207ENST00000483888 MKRN1Q9UHC7 482 aaKnown RBP11.84□□□□□ -0.51
COL12A1-207ENST00000483888 GIMAP6Q6P9H5 292 aa11.84□□□□□ -0.51
COL12A1-207ENST00000483888 ZNF365Q70YC5 407 aa11.84□□□□□ -0.51
COL12A1-207ENST00000483888 MXRA7P84157 204 aa11.84□□□□□ -0.51
COL12A1-207ENST00000483888 CPLX3Q8WVH0 158 aa11.84□□□□□ -0.51
COL12A1-207ENST00000483888 BAZ1AQ9NRL2 1556 aaPredicted RBP11.84□□□□□ -0.51
COL12A1-207ENST00000483888 WASHC4Q2M389 1173 aa11.83□□□□□ -0.51
COL12A1-207ENST00000483888 ZMAT2Q96NC0 199 aaKnown RBP11.83□□□□□ -0.51
COL12A1-207ENST00000483888 EFCC1Q9HA90 598 aa11.83□□□□□ -0.51
COL12A1-207ENST00000483888 TUBB4BP68371 445 aa11.83□□□□□ -0.52
COL12A1-207ENST00000483888 KLHL10Q6JEL2 608 aa11.83□□□□□ -0.52
COL12A1-207ENST00000483888 VCXQ9H320 206 aa11.83□□□□□ -0.52
COL12A1-207ENST00000483888 STIM2Q9P246 746 aa11.83□□□□□ -0.52
COL12A1-207ENST00000483888 DDX19AQ9NUU7 478 aaKnown RBP11.83□□□□□ -0.52
COL12A1-207ENST00000483888 CCDC158Q5M9N0 1113 aa11.83□□□□□ -0.52
COL12A1-207ENST00000483888 RPUSD2Q8IZ73 545 aaKnown RBP11.83□□□□□ -0.52
COL12A1-207ENST00000483888 MVPQ14764 893 aaKnown RBP11.83□□□□□ -0.52
COL12A1-207ENST00000483888 CTCFLQ8NI51 663 aaPredicted RBP11.83□□□□□ -0.52
COL12A1-207ENST00000483888 PUS7Q96PZ0 661 aaKnown RBP11.83□□□□□ -0.52
COL12A1-207ENST00000483888 FRMD3A2A2Y4 597 aa11.83□□□□□ -0.52
COL12A1-207ENST00000483888 GBP7Q8N8V2 638 aaPredicted RBP11.83□□□□□ -0.52
COL12A1-207ENST00000483888 JAKMIP1Q96N16 626 aaKnown RBP11.83□□□□□ -0.52
COL12A1-207ENST00000483888 CCDC129Q6ZRS4 1044 aa11.83□□□□□ -0.52
COL12A1-207ENST00000483888 ERO1AQ96HE7 468 aa11.83□□□□□ -0.52
COL12A1-207ENST00000483888 EIF2S2P20042 333 aaKnown RBP11.82□□□□□ -0.52
COL12A1-207ENST00000483888 RFC1P35251 1148 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-207ENST00000483888 DDX23Q9BUQ8 820 aaKnown RBP11.82□□□□□ -0.52
COL12A1-207ENST00000483888 TPX2Q9ULW0 747 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms