RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 ATP6V1AP38606 617 aa24.65■■□□□ 1.54
ATG4B-221ENST00000483778 PLEKHO1Q53GL0 409 aaPredicted RBP24.65■■□□□ 1.54
ATG4B-221ENST00000483778 ZNF530Q6P9A1 599 aaPredicted RBP24.65■■□□□ 1.54
ATG4B-221ENST00000483778 KDM6AO15550 1401 aaPredicted RBP24.64■■□□□ 1.54
ATG4B-221ENST00000483778 IL13P35225 146 aa24.64■■□□□ 1.54
ATG4B-221ENST00000483778 SULT6B1Q6IMI4 303 aa24.63■■□□□ 1.53
ATG4B-221ENST00000483778 MYH14Q7Z406 1995 aaKnown RBP24.62■■□□□ 1.53
ATG4B-221ENST00000483778 ERVV-2B6SEH9 535 aa24.62■■□□□ 1.53
ATG4B-221ENST00000483778 PER1O15534 1290 aaPredicted RBP24.62■■□□□ 1.53
ATG4B-221ENST00000483778 DCAF5Q96JK2 942 aa24.62■■□□□ 1.53
ATG4B-221ENST00000483778 GNPATO15228 680 aa24.6■■□□□ 1.53
ATG4B-221ENST00000483778 RBM42Q9BTD8 480 aaKnown RBP24.6■■□□□ 1.53
ATG4B-221ENST00000483778 KDRP35968 1356 aa24.59■■□□□ 1.53
ATG4B-221ENST00000483778 HMGB2P26583 209 aaKnown RBP24.59■■□□□ 1.53
ATG4B-221ENST00000483778 SSFA2P28290 1259 aa24.59■■□□□ 1.53
ATG4B-221ENST00000483778 MTHFSP49914 203 aa24.59■■□□□ 1.53
ATG4B-221ENST00000483778 AMOTQ4VCS5 1084 aa24.59■■□□□ 1.53
ATG4B-221ENST00000483778 PLEKHG2Q9H7P9 1386 aa24.58■■□□□ 1.53
ATG4B-221ENST00000483778 CD2APQ9Y5K6 639 aa24.58■■□□□ 1.53
ATG4B-221ENST00000483778 VIRMAQ69YN4 1812 aaKnown RBP24.58■■□□□ 1.53
ATG4B-221ENST00000483778 COL5A3P25940 1745 aaPredicted RBP24.58■■□□□ 1.52
ATG4B-221ENST00000483778 SCN11AQ9UI33 1791 aa24.57■■□□□ 1.52
ATG4B-221ENST00000483778 CABP4P57796 275 aa24.57■■□□□ 1.52
ATG4B-221ENST00000483778 ZNF831Q5JPB2 1677 aa24.56■■□□□ 1.52
ATG4B-221ENST00000483778 HSP90AB1P08238 724 aaKnown RBP24.56■■□□□ 1.52
ATG4B-221ENST00000483778 CC2D1BQ5T0F9 858 aaKnown RBP24.56■■□□□ 1.52
ATG4B-221ENST00000483778 NFATC2IPQ8NCF5 419 aa24.56■■□□□ 1.52
ATG4B-221ENST00000483778 WWC3Q9ULE0 1092 aa24.55■■□□□ 1.52
ATG4B-221ENST00000483778 CNGB1Q14028 1251 aaPredicted RBP24.54■■□□□ 1.52
ATG4B-221ENST00000483778 PTCD1O75127 700 aaKnown RBP24.53■■□□□ 1.52
ATG4B-221ENST00000483778 HMOX1P09601 288 aa24.53■■□□□ 1.52
ATG4B-221ENST00000483778 C1orf141Q5JVX7 400 aa24.53■■□□□ 1.52
ATG4B-221ENST00000483778 LGR6Q9HBX8 967 aa24.53■■□□□ 1.52
ATG4B-221ENST00000483778 ARHGEF1Q92888 912 aaKnown RBP24.51■■□□□ 1.51
ATG4B-221ENST00000483778 TRAPPC3LQ5T215 181 aa24.5■■□□□ 1.51
ATG4B-221ENST00000483778 RC3H1Q5TC82 1133 aaKnown RBP24.5■■□□□ 1.51
ATG4B-221ENST00000483778 RTCBQ9Y3I0 505 aaKnown RBP24.5■■□□□ 1.51
ATG4B-221ENST00000483778 GRIN3BO60391 1043 aa24.49■■□□□ 1.51
ATG4B-221ENST00000483778 MMP10P09238 476 aa24.49■■□□□ 1.51
ATG4B-221ENST00000483778 RPS6KA4O75676 772 aa24.48■■□□□ 1.51
ATG4B-221ENST00000483778 C4AP0C0L4 1744 aa24.48■■□□□ 1.51
ATG4B-221ENST00000483778 TJP1Q07157 1748 aa24.48■■□□□ 1.51
ATG4B-221ENST00000483778 N4BP2Q86UW6 1770 aaPredicted RBP24.47■■□□□ 1.51
ATG4B-221ENST00000483778 CNTNAP4Q9C0A0 1308 aa24.47■■□□□ 1.51
ATG4B-221ENST00000483778 AKAP4Q5JQC9 854 aa24.46■■□□□ 1.51
ATG4B-221ENST00000483778 KIF13BQ9NQT8 1826 aa24.46■■□□□ 1.51
ATG4B-221ENST00000483778 KIAA1551Q9HCM1 1747 aa24.46■■□□□ 1.51
ATG4B-221ENST00000483778 MTHFSDQ2M296 383 aaKnown RBP24.45■■□□□ 1.5
ATG4B-221ENST00000483778 RNMTO43148 476 aaKnown RBP24.44■■□□□ 1.5
ATG4B-221ENST00000483778 DIAPH1O60610 1272 aaKnown RBP24.44■■□□□ 1.5
ATG4B-221ENST00000483778 GYS1P13807 737 aa24.44■■□□□ 1.5
ATG4B-221ENST00000483778 CRKLP46109 303 aaKnown RBP24.44■■□□□ 1.5
ATG4B-221ENST00000483778 SLC39A6Q13433 755 aa24.43■■□□□ 1.5
ATG4B-221ENST00000483778 SLC52A2Q9HAB3 445 aa24.43■■□□□ 1.5
ATG4B-221ENST00000483778 INTS5Q6P9B9 1019 aaKnown RBP24.42■■□□□ 1.5
ATG4B-221ENST00000483778 SRP68Q9UHB9 627 aaKnown RBP24.42■■□□□ 1.5
ATG4B-221ENST00000483778 CICQ96RK0 1608 aaPredicted RBP24.42■■□□□ 1.5
ATG4B-221ENST00000483778 COL3A1P02461 1466 aaPredicted RBP24.41■■□□□ 1.5
ATG4B-221ENST00000483778 RFC4P35249 363 aa24.41■■□□□ 1.5
ATG4B-221ENST00000483778 C1QTNF8P60827 252 aa24.41■■□□□ 1.5
ATG4B-221ENST00000483778 NLGN1Q8N2Q7 840 aa24.41■■□□□ 1.5
ATG4B-221ENST00000483778 ADAMTS7Q9UKP4 1686 aa24.4■■□□□ 1.5
ATG4B-221ENST00000483778 ADRA2BP18089 450 aa24.4■■□□□ 1.5
ATG4B-221ENST00000483778 DNAJC10Q8IXB1 793 aa24.4■■□□□ 1.5
ATG4B-221ENST00000483778 A0A0G2JLW4 131 aa24.39■■□□□ 1.49
ATG4B-221ENST00000483778 NPC1L1Q9UHC9 1359 aa24.38■■□□□ 1.49
ATG4B-221ENST00000483778 PXDNLA1KZ92 1463 aa24.38■■□□□ 1.49
ATG4B-221ENST00000483778 FKBP8Q14318 412 aa24.37■■□□□ 1.49
ATG4B-221ENST00000483778 MRC1P22897 1456 aa24.37■■□□□ 1.49
ATG4B-221ENST00000483778 ATP10DQ9P241 1426 aa24.35■■□□□ 1.49
ATG4B-221ENST00000483778 KCPQ6ZWJ8 1503 aa24.35■■□□□ 1.49
ATG4B-221ENST00000483778 U2SURPO15042 1029 aaKnown RBP24.35■■□□□ 1.49
ATG4B-221ENST00000483778 BRCA1P38398 1863 aaKnown RBP24.34■■□□□ 1.49
ATG4B-221ENST00000483778 CYP19A1P11511 503 aaPredicted RBP24.34■■□□□ 1.49
ATG4B-221ENST00000483778 C10orf71Q711Q0 1435 aa24.34■■□□□ 1.49
ATG4B-221ENST00000483778 DPEP1P16444 411 aa24.33■■□□□ 1.49
ATG4B-221ENST00000483778 DDR1Q08345 913 aa24.33■■□□□ 1.49
ATG4B-221ENST00000483778 IL17REQ8NFR9 667 aa24.33■■□□□ 1.49
ATG4B-221ENST00000483778 CCDC87Q9NVE4 849 aa24.33■■□□□ 1.49
ATG4B-221ENST00000483778 PARP3Q9Y6F1 533 aa24.33■■□□□ 1.49
ATG4B-221ENST00000483778 USP42Q9H9J4 1324 aaKnown RBP24.33■■□□□ 1.48
ATG4B-221ENST00000483778 UBR2Q8IWV8 1755 aa24.32■■□□□ 1.48
ATG4B-221ENST00000483778 GIGYF1O75420 1035 aaPredicted RBP24.32■■□□□ 1.48
ATG4B-221ENST00000483778 KCNA3P22001 575 aa24.32■■□□□ 1.48
ATG4B-221ENST00000483778 TGFB2P61812 414 aa24.32■■□□□ 1.48
ATG4B-221ENST00000483778 ADCY9O60503 1353 aa24.31■■□□□ 1.48
ATG4B-221ENST00000483778 ZNF526Q8TF50 670 aaPredicted RBP24.31■■□□□ 1.48
ATG4B-221ENST00000483778 SIPA1L3O60292 1781 aaPredicted RBP24.3■■□□□ 1.48
ATG4B-221ENST00000483778 PHACTR3Q96KR7 559 aa24.3■■□□□ 1.48
ATG4B-221ENST00000483778 SOS1Q07889 1333 aaPredicted RBP24.3■■□□□ 1.48
ATG4B-221ENST00000483778 SENP3-EIF4A1A0A087X0R7 540 aa24.29■■□□□ 1.48
ATG4B-221ENST00000483778 TM4SF1P30408 202 aa24.29■■□□□ 1.48
ATG4B-221ENST00000483778 BCS1LQ9Y276 419 aa24.29■■□□□ 1.48
ATG4B-221ENST00000483778 AFDNP55196 1824 aaKnown RBP24.28■■□□□ 1.48
ATG4B-221ENST00000483778 USPL1Q5W0Q7 1092 aa24.28■■□□□ 1.48
ATG4B-221ENST00000483778 ZBTB1Q9Y2K1 713 aa24.28■■□□□ 1.48
ATG4B-221ENST00000483778 GNAT3A8MTJ3 354 aa24.25■■□□□ 1.47
ATG4B-221ENST00000483778 POLRMTO00411 1230 aaKnown RBP24.25■■□□□ 1.47
ATG4B-221ENST00000483778 BCL2L12Q9HB09 334 aa24.25■■□□□ 1.47
ATG4B-221ENST00000483778 ARFGEF1Q9Y6D6 1849 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms