RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 GJD4Q96KN9 370 aaPredicted RBP22.08■■□□□ 1.13
MRPL28-210ENST00000483764 SLC52A2Q9HAB3 445 aa22.08■■□□□ 1.13
MRPL28-210ENST00000483764 BTBD11A6QL63 1104 aa22.07■■□□□ 1.12
MRPL28-210ENST00000483764 TNS2Q63HR2 1409 aa22.07■■□□□ 1.12
MRPL28-210ENST00000483764 C8orf58Q8NAV2 365 aa22.06■■□□□ 1.12
MRPL28-210ENST00000483764 WNK3Q9BYP7 1800 aa22.06■■□□□ 1.12
MRPL28-210ENST00000483764 ATRNO75882 1429 aa22.06■■□□□ 1.12
MRPL28-210ENST00000483764 ERVV-2B6SEH9 535 aa22.06■■□□□ 1.12
MRPL28-210ENST00000483764 B4GALNT3Q6L9W6 998 aa22.06■■□□□ 1.12
MRPL28-210ENST00000483764 NFATC2IPQ8NCF5 419 aa22.06■■□□□ 1.12
MRPL28-210ENST00000483764 QTRT2Q9H974 415 aaKnown RBP22.06■■□□□ 1.12
MRPL28-210ENST00000483764 SHANK3Q9BYB0 1731 aa22.06■■□□□ 1.12
MRPL28-210ENST00000483764 RARSP54136 660 aaKnown RBP22.05■■□□□ 1.12
MRPL28-210ENST00000483764 CABP4P57796 275 aa22.05■■□□□ 1.12
MRPL28-210ENST00000483764 TSPYL6Q8N831 410 aa22.05■■□□□ 1.12
MRPL28-210ENST00000483764 SCN11AQ9UI33 1791 aa22.04■■□□□ 1.12
MRPL28-210ENST00000483764 ELL2O00472 640 aaPredicted RBP22.04■■□□□ 1.12
MRPL28-210ENST00000483764 VAMP4O75379 141 aa22.04■■□□□ 1.12
MRPL28-210ENST00000483764 TWISTNBQ3B726 338 aaPredicted RBP22.04■■□□□ 1.12
MRPL28-210ENST00000483764 ZNF428Q96B54 188 aa22.03■■□□□ 1.12
MRPL28-210ENST00000483764 KRT24Q2M2I5 525 aa22.02■■□□□ 1.12
MRPL28-210ENST00000483764 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.02■■□□□ 1.12
MRPL28-210ENST00000483764 SOCS7O14512 581 aa22.01■■□□□ 1.11
MRPL28-210ENST00000483764 BCAR3O75815 825 aa22.01■■□□□ 1.11
MRPL28-210ENST00000483764 MRC1P22897 1456 aa22.01■■□□□ 1.11
MRPL28-210ENST00000483764 A0A0G2JS52 829 aa22.01■■□□□ 1.11
MRPL28-210ENST00000483764 KCNQ3O43525 872 aa22.01■■□□□ 1.11
MRPL28-210ENST00000483764 ONECUT3O60422 494 aaPredicted RBP22.01■■□□□ 1.11
MRPL28-210ENST00000483764 ZNF772Q68DY9 489 aaPredicted RBP22.01■■□□□ 1.11
MRPL28-210ENST00000483764 MARCH10Q8NA82 808 aaPredicted RBP22.01■■□□□ 1.11
MRPL28-210ENST00000483764 EIF4A1P60842 406 aaKnown RBP22■■□□□ 1.11
MRPL28-210ENST00000483764 GLI3P10071 1580 aa22■■□□□ 1.11
MRPL28-210ENST00000483764 VIRMAQ69YN4 1812 aaKnown RBP21.99■■□□□ 1.11
MRPL28-210ENST00000483764 SIPA1L3O60292 1781 aaPredicted RBP21.98■■□□□ 1.11
MRPL28-210ENST00000483764 ALDH1L2Q3SY69 923 aa21.98■■□□□ 1.11
MRPL28-210ENST00000483764 ZNF790Q6PG37 636 aa21.98■■□□□ 1.11
MRPL28-210ENST00000483764 SSH1Q8WYL5 1049 aa21.98■■□□□ 1.11
MRPL28-210ENST00000483764 SLC39A6Q13433 755 aa21.97■■□□□ 1.11
MRPL28-210ENST00000483764 BCL2L13Q9BXK5 485 aa21.97■■□□□ 1.11
MRPL28-210ENST00000483764 SOS1Q07889 1333 aaPredicted RBP21.97■■□□□ 1.11
MRPL28-210ENST00000483764 SMC4Q9NTJ3 1288 aa21.96■■□□□ 1.11
MRPL28-210ENST00000483764 TMOD3Q9NYL9 352 aa21.96■■□□□ 1.11
MRPL28-210ENST00000483764 KDM3BQ7LBC6 1761 aa21.96■■□□□ 1.11
MRPL28-210ENST00000483764 PLIN1O60240 522 aa21.96■■□□□ 1.11
MRPL28-210ENST00000483764 TTC5Q8N0Z6 440 aa21.95■■□□□ 1.1
MRPL28-210ENST00000483764 THSD7AQ9UPZ6 1657 aa21.94■■□□□ 1.1
MRPL28-210ENST00000483764 SEPT12Q8IYM1 358 aa21.94■■□□□ 1.1
MRPL28-210ENST00000483764 HOXB7P09629 217 aa21.93■■□□□ 1.1
MRPL28-210ENST00000483764 PIGBQ92521 554 aa21.93■■□□□ 1.1
MRPL28-210ENST00000483764 HEG1Q9ULI3 1381 aa21.92■■□□□ 1.1
MRPL28-210ENST00000483764 PRIM1P49642 420 aaKnown RBP21.92■■□□□ 1.1
MRPL28-210ENST00000483764 TOGARAM1Q9Y4F4 1720 aa21.92■■□□□ 1.1
MRPL28-210ENST00000483764 TCERG1O14776 1098 aaKnown RBP21.91■■□□□ 1.1
MRPL28-210ENST00000483764 GIGYF1O75420 1035 aaPredicted RBP21.91■■□□□ 1.1
MRPL28-210ENST00000483764 BRPF1P55201 1214 aaPredicted RBP21.91■■□□□ 1.1
MRPL28-210ENST00000483764 RBM6P78332 1123 aaKnown RBP21.91■■□□□ 1.1
MRPL28-210ENST00000483764 MRPL50Q8N5N7 158 aaKnown RBP21.91■■□□□ 1.1
MRPL28-210ENST00000483764 FRAT1Q92837 279 aaPredicted RBP21.91■■□□□ 1.1
MRPL28-210ENST00000483764 CANXP27824 592 aaKnown RBP21.9■■□□□ 1.1
MRPL28-210ENST00000483764 SYTL4Q96C24 671 aaPredicted RBP21.9■■□□□ 1.1
MRPL28-210ENST00000483764 ZNF496Q96IT1 587 aaPredicted RBP21.9■■□□□ 1.1
MRPL28-210ENST00000483764 FMNL2Q96PY5 1086 aa21.9■■□□□ 1.1
MRPL28-210ENST00000483764 CHMP4AQ9BY43 222 aa21.9■■□□□ 1.1
MRPL28-210ENST00000483764 CCDC30Q5VVM6 783 aa21.9■■□□□ 1.1
MRPL28-210ENST00000483764 BCL9O00512 1426 aa21.9■■□□□ 1.1
MRPL28-210ENST00000483764 KIF16BQ96L93 1317 aa21.88■■□□□ 1.09
MRPL28-210ENST00000483764 HDGFL1Q5TGJ6 251 aa21.88■■□□□ 1.09
MRPL28-210ENST00000483764 ACSBG1Q96GR2 724 aa21.88■■□□□ 1.09
MRPL28-210ENST00000483764 NOB1Q9ULX3 412 aaKnown RBP21.88■■□□□ 1.09
MRPL28-210ENST00000483764 ZKSCAN2Q63HK3 967 aa21.87■■□□□ 1.09
MRPL28-210ENST00000483764 STK31Q9BXU1 1019 aa21.87■■□□□ 1.09
MRPL28-210ENST00000483764 ASAP1Q9ULH1 1129 aa21.87■■□□□ 1.09
MRPL28-210ENST00000483764 IPO8O15397 1037 aaKnown RBP21.86■■□□□ 1.09
MRPL28-210ENST00000483764 SNRPA1P09661 255 aaKnown RBP21.86■■□□□ 1.09
MRPL28-210ENST00000483764 EIF2S2P20042 333 aaKnown RBP21.86■■□□□ 1.09
MRPL28-210ENST00000483764 EXOC6Q8TAG9 804 aa21.86■■□□□ 1.09
MRPL28-210ENST00000483764 NECTIN2Q92692 538 aa21.86■■□□□ 1.09
MRPL28-210ENST00000483764 ATG3Q9NT62 314 aa21.86■■□□□ 1.09
MRPL28-210ENST00000483764 SLC4A2P04920 1241 aa21.85■■□□□ 1.09
MRPL28-210ENST00000483764 MS4A1P11836 297 aa21.85■■□□□ 1.09
MRPL28-210ENST00000483764 C20orf194Q5TEA3 1177 aa21.85■■□□□ 1.09
MRPL28-210ENST00000483764 RGS17Q9UGC6 210 aaPredicted RBP21.85■■□□□ 1.09
MRPL28-210ENST00000483764 PRAMEF22A3QJZ6 481 aa21.85■■□□□ 1.09
MRPL28-210ENST00000483764 PTCD1O75127 700 aaKnown RBP21.85■■□□□ 1.09
MRPL28-210ENST00000483764 RXRBP28702 533 aa21.85■■□□□ 1.09
MRPL28-210ENST00000483764 PDE3AQ14432 1141 aa21.85■■□□□ 1.09
MRPL28-210ENST00000483764 DOT1LQ8TEK3 1739 aa21.84■■□□□ 1.09
MRPL28-210ENST00000483764 ARHGAP45Q92619 1136 aa21.84■■□□□ 1.09
MRPL28-210ENST00000483764 ITGB4P16144 1822 aa21.83■■□□□ 1.09
MRPL28-210ENST00000483764 KCNQ2O43526 872 aa21.83■■□□□ 1.09
MRPL28-210ENST00000483764 AAMPQ13685 434 aa21.83■■□□□ 1.09
MRPL28-210ENST00000483764 FAM182BQ5T319 152 aa21.83■■□□□ 1.09
MRPL28-210ENST00000483764 ATF7IPQ6VMQ6 1270 aa21.83■■□□□ 1.09
MRPL28-210ENST00000483764 PAPPAQ13219 1627 aa21.82■■□□□ 1.08
MRPL28-210ENST00000483764 KCPQ6ZWJ8 1503 aa21.82■■□□□ 1.08
MRPL28-210ENST00000483764 TRIM27P14373 513 aa21.81■■□□□ 1.08
MRPL28-210ENST00000483764 KRT27Q7Z3Y8 459 aa21.81■■□□□ 1.08
MRPL28-210ENST00000483764 USP16Q9Y5T5 823 aa21.81■■□□□ 1.08
MRPL28-210ENST00000483764 DBF4Q9UBU7 674 aaPredicted RBP21.8■■□□□ 1.08
MRPL28-210ENST00000483764 TNNQ9UQP3 1299 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms