RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 PLCB2Q00722 1185 aa11.22□□□□□ -0.61
CDC42SE1-204ENST00000483763 PLEKHO1Q53GL0 409 aaPredicted RBP11.22□□□□□ -0.61
CDC42SE1-204ENST00000483763 NECTIN2Q92692 538 aa11.22□□□□□ -0.61
CDC42SE1-204ENST00000483763 RWDD1Q9H446 243 aaPredicted RBP11.22□□□□□ -0.61
CDC42SE1-204ENST00000483763 NLRP2Q9NX02 1062 aa11.22□□□□□ -0.61
CDC42SE1-204ENST00000483763 MSH5O43196 834 aa11.21□□□□□ -0.61
CDC42SE1-204ENST00000483763 AKAP4Q5JQC9 854 aa11.21□□□□□ -0.61
CDC42SE1-204ENST00000483763 NGLY1Q96IV0 654 aa11.21□□□□□ -0.61
CDC42SE1-204ENST00000483763 HDAC1Q13547 482 aaPredicted RBP11.21□□□□□ -0.62
CDC42SE1-204ENST00000483763 PDZRN3Q9UPQ7 1066 aa11.21□□□□□ -0.62
CDC42SE1-204ENST00000483763 COL18A1P39060 1754 aa11.21□□□□□ -0.62
CDC42SE1-204ENST00000483763 NHSL1Q5SYE7 1610 aa11.2□□□□□ -0.62
CDC42SE1-204ENST00000483763 AMOTQ4VCS5 1084 aa11.2□□□□□ -0.62
CDC42SE1-204ENST00000483763 API5Q9BZZ5 524 aaKnown RBP11.2□□□□□ -0.62
CDC42SE1-204ENST00000483763 AHDC1Q5TGY3 1603 aaPredicted RBP11.2□□□□□ -0.62
CDC42SE1-204ENST00000483763 F6X3S4 739 aa11.2□□□□□ -0.62
CDC42SE1-204ENST00000483763 C8orf34Q49A92 452 aa11.2□□□□□ -0.62
CDC42SE1-204ENST00000483763 SIRT2Q8IXJ6 389 aa11.2□□□□□ -0.62
CDC42SE1-204ENST00000483763 EP400Q96L91 3159 aa11.2□□□□□ -0.62
CDC42SE1-204ENST00000483763 CRYBG1Q9Y4K1 1723 aa11.19□□□□□ -0.62
CDC42SE1-204ENST00000483763 CAMTA1Q9Y6Y1 1673 aa11.19□□□□□ -0.62
CDC42SE1-204ENST00000483763 RNMTO43148 476 aaKnown RBP11.19□□□□□ -0.62
CDC42SE1-204ENST00000483763 INTS3Q68E01 1043 aaKnown RBP11.19□□□□□ -0.62
CDC42SE1-204ENST00000483763 CPDO75976 1380 aa11.19□□□□□ -0.62
CDC42SE1-204ENST00000483763 LMO7Q8WWI1 1683 aa11.18□□□□□ -0.62
CDC42SE1-204ENST00000483763 AFF2P51816 1311 aa11.18□□□□□ -0.62
CDC42SE1-204ENST00000483763 ZBTB22O15209 634 aa11.18□□□□□ -0.62
CDC42SE1-204ENST00000483763 CSB-PGBD3P0DP91 1061 aa11.18□□□□□ -0.62
CDC42SE1-204ENST00000483763 EIF4A1P60842 406 aaKnown RBP11.18□□□□□ -0.62
CDC42SE1-204ENST00000483763 BABAM1Q9NWV8 329 aa11.18□□□□□ -0.62
CDC42SE1-204ENST00000483763 MEGF6O75095 1541 aa11.18□□□□□ -0.62
CDC42SE1-204ENST00000483763 C1orf141Q5JVX7 400 aa11.18□□□□□ -0.62
CDC42SE1-204ENST00000483763 SMC5Q8IY18 1101 aa11.18□□□□□ -0.62
CDC42SE1-204ENST00000483763 PTPRCP08575 1304 aa11.17□□□□□ -0.62
CDC42SE1-204ENST00000483763 BTBD11A6QL63 1104 aa11.17□□□□□ -0.62
CDC42SE1-204ENST00000483763 TEFQ10587 303 aa11.17□□□□□ -0.62
CDC42SE1-204ENST00000483763 RAPGEF4Q8WZA2 1011 aa11.17□□□□□ -0.62
CDC42SE1-204ENST00000483763 SRCAPQ6ZRS2 3230 aa11.17□□□□□ -0.62
CDC42SE1-204ENST00000483763 PRDM11Q9NQV5 511 aa11.17□□□□□ -0.62
CDC42SE1-204ENST00000483763 FAM161AQ3B820 660 aa11.16□□□□□ -0.62
CDC42SE1-204ENST00000483763 CCDC30Q5VVM6 783 aa11.16□□□□□ -0.62
CDC42SE1-204ENST00000483763 QTRT2Q9H974 415 aaKnown RBP11.16□□□□□ -0.62
CDC42SE1-204ENST00000483763 FAM208AQ9UK61 1670 aaKnown RBP11.16□□□□□ -0.62
CDC42SE1-204ENST00000483763 SPATA31A6Q5VVP1 1343 aa11.16□□□□□ -0.62
CDC42SE1-204ENST00000483763 PRAMEF22A3QJZ6 481 aa11.16□□□□□ -0.62
CDC42SE1-204ENST00000483763 EIF2S2P20042 333 aaKnown RBP11.16□□□□□ -0.62
CDC42SE1-204ENST00000483763 FLIIQ13045 1269 aa11.16□□□□□ -0.62
CDC42SE1-204ENST00000483763 SLC4A10Q6U841 1118 aa11.16□□□□□ -0.62
CDC42SE1-204ENST00000483763 MEIS3Q99687 375 aa11.16□□□□□ -0.62
CDC42SE1-204ENST00000483763 STK31Q9BXU1 1019 aa11.16□□□□□ -0.62
CDC42SE1-204ENST00000483763 CYP27B1O15528 508 aa11.15□□□□□ -0.62
CDC42SE1-204ENST00000483763 HDGFL1Q5TGJ6 251 aa11.15□□□□□ -0.62
CDC42SE1-204ENST00000483763 NPM2Q86SE8 214 aaKnown RBP11.15□□□□□ -0.62
CDC42SE1-204ENST00000483763 PHAXQ9H814 394 aaKnown RBP11.15□□□□□ -0.62
CDC42SE1-204ENST00000483763 PHKG2P15735 406 aa11.14□□□□□ -0.63
CDC42SE1-204ENST00000483763 TATP17735 454 aaPredicted RBP11.14□□□□□ -0.63
CDC42SE1-204ENST00000483763 KDM6AO15550 1401 aaPredicted RBP11.14□□□□□ -0.63
CDC42SE1-204ENST00000483763 ANXA1P04083 346 aa11.14□□□□□ -0.63
CDC42SE1-204ENST00000483763 FKBP5Q13451 457 aaPredicted RBP11.14□□□□□ -0.63
CDC42SE1-204ENST00000483763 USP21Q9UK80 565 aa11.14□□□□□ -0.63
CDC42SE1-204ENST00000483763 SEC24BO95487 1268 aa11.13□□□□□ -0.63
CDC42SE1-204ENST00000483763 SLC39A6Q13433 755 aa11.13□□□□□ -0.63
CDC42SE1-204ENST00000483763 NUCB1Q02818 461 aa11.13□□□□□ -0.63
CDC42SE1-204ENST00000483763 NFATC2IPQ8NCF5 419 aa11.13□□□□□ -0.63
CDC42SE1-204ENST00000483763 LNPKQ9C0E8 428 aa11.13□□□□□ -0.63
CDC42SE1-204ENST00000483763 CHPF2Q9P2E5 772 aa11.13□□□□□ -0.63
CDC42SE1-204ENST00000483763 ATP10DQ9P241 1426 aa11.12□□□□□ -0.63
CDC42SE1-204ENST00000483763 GIGYF1O75420 1035 aaPredicted RBP11.12□□□□□ -0.63
CDC42SE1-204ENST00000483763 CHMP4BQ9H444 224 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-204ENST00000483763 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.12□□□□□ -0.63
CDC42SE1-204ENST00000483763 ABCA3Q99758 1704 aa11.12□□□□□ -0.63
CDC42SE1-204ENST00000483763 SOS1Q07889 1333 aaPredicted RBP11.12□□□□□ -0.63
CDC42SE1-204ENST00000483763 WDR17Q8IZU2 1322 aa11.12□□□□□ -0.63
CDC42SE1-204ENST00000483763 KDM3BQ7LBC6 1761 aa11.12□□□□□ -0.63
CDC42SE1-204ENST00000483763 HEG1Q9ULI3 1381 aa11.12□□□□□ -0.63
CDC42SE1-204ENST00000483763 COL5A2P05997 1499 aaPredicted RBP11.12□□□□□ -0.63
CDC42SE1-204ENST00000483763 LARP1Q6PKG0 1096 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-204ENST00000483763 TOM1L2Q6ZVM7 507 aa11.12□□□□□ -0.63
CDC42SE1-204ENST00000483763 SPG7Q9UQ90 795 aa11.12□□□□□ -0.63
CDC42SE1-204ENST00000483763 ABCC6O95255 1503 aa11.11□□□□□ -0.63
CDC42SE1-204ENST00000483763 PROSER3Q2NL68 480 aa11.11□□□□□ -0.63
CDC42SE1-204ENST00000483763 IFNL2Q8IZJ0 200 aa11.11□□□□□ -0.63
CDC42SE1-204ENST00000483763 SLC52A2Q9HAB3 445 aa11.11□□□□□ -0.63
CDC42SE1-204ENST00000483763 STRN4Q9NRL3 753 aa11.11□□□□□ -0.63
CDC42SE1-204ENST00000483763 OVOS2A0A0G2JMS6 1433 aa11.11□□□□□ -0.63
CDC42SE1-204ENST00000483763 CEP85Q6P2H3 762 aa11.11□□□□□ -0.63
CDC42SE1-204ENST00000483763 CHD1LQ86WJ1 897 aa11.11□□□□□ -0.63
CDC42SE1-204ENST00000483763 CCDC9Q9Y3X0 531 aaKnown RBP11.11□□□□□ -0.63
CDC42SE1-204ENST00000483763 ADAMTS7Q9UKP4 1686 aa11.11□□□□□ -0.63
CDC42SE1-204ENST00000483763 VIRMAQ69YN4 1812 aaKnown RBP11.11□□□□□ -0.63
CDC42SE1-204ENST00000483763 HOXB7P09629 217 aa11.1□□□□□ -0.63
CDC42SE1-204ENST00000483763 ANP32AP39687 249 aaKnown RBP11.1□□□□□ -0.63
CDC42SE1-204ENST00000483763 EVA1CP58658 441 aa11.1□□□□□ -0.63
CDC42SE1-204ENST00000483763 ANKRD45Q5TZF3 282 aa11.1□□□□□ -0.63
CDC42SE1-204ENST00000483763 ZNF790Q6PG37 636 aa11.1□□□□□ -0.63
CDC42SE1-204ENST00000483763 USP35Q9P2H5 1018 aa11.1□□□□□ -0.63
CDC42SE1-204ENST00000483763 RXRBP28702 533 aa11.1□□□□□ -0.63
CDC42SE1-204ENST00000483763 CCT4P50991 539 aaKnown RBP11.1□□□□□ -0.63
CDC42SE1-204ENST00000483763 ANKRD44Q8N8A2 993 aa11.1□□□□□ -0.63
CDC42SE1-204ENST00000483763 BTG4Q9NY30 223 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms