RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 UBAP2LQ14157 1087 aaKnown RBP10.14□□□□□ -0.79
COMMD3-213ENST00000483684 KRTAP4-8Q9BYQ9 185 aa10.14□□□□□ -0.79
COMMD3-213ENST00000483684 NDUFB9Q9Y6M9 179 aa10.14□□□□□ -0.79
COMMD3-213ENST00000483684 PROCP04070 461 aa10.13□□□□□ -0.79
COMMD3-213ENST00000483684 XAGE2Q96GT9 111 aa10.13□□□□□ -0.79
COMMD3-213ENST00000483684 CCDC85AQ96PX6 553 aaPredicted RBP10.13□□□□□ -0.79
COMMD3-213ENST00000483684 OXCT2Q9BYC2 517 aaPredicted RBP10.13□□□□□ -0.79
COMMD3-213ENST00000483684 NEUROD2Q15784 382 aa10.12□□□□□ -0.79
COMMD3-213ENST00000483684 CDCA7Q9BWT1 371 aaPredicted RBP10.12□□□□□ -0.79
COMMD3-213ENST00000483684 FHDC1Q9C0D6 1143 aaPredicted RBP10.12□□□□□ -0.79
COMMD3-213ENST00000483684 CEP126Q9P2H0 1117 aa10.12□□□□□ -0.79
COMMD3-213ENST00000483684 A0A1B0GTH6 734 aa10.11□□□□□ -0.79
COMMD3-213ENST00000483684 ADAM23O75077 832 aa10.11□□□□□ -0.79
COMMD3-213ENST00000483684 C1orf229Q6ZS94 237 aaPredicted RBP10.11□□□□□ -0.79
COMMD3-213ENST00000483684 ESF1Q9H501 851 aaKnown RBP10.11□□□□□ -0.79
COMMD3-213ENST00000483684 SNRPNP63162 240 aaKnown RBP10.1□□□□□ -0.79
COMMD3-213ENST00000483684 LBRQ14739 615 aaKnown RBP10.1□□□□□ -0.79
COMMD3-213ENST00000483684 KLRG1Q96E93 195 aa10.1□□□□□ -0.79
COMMD3-213ENST00000483684 ZSCAN10Q96SZ4 725 aaPredicted RBP10.1□□□□□ -0.79
COMMD3-213ENST00000483684 SHISA8B8ZZ34 492 aa10.09□□□□□ -0.79
COMMD3-213ENST00000483684 PHKA2P46019 1235 aa10.09□□□□□ -0.79
COMMD3-213ENST00000483684 GPAMQ9HCL2 828 aa10.09□□□□□ -0.79
COMMD3-213ENST00000483684 SNRKQ9NRH2 765 aa10.09□□□□□ -0.79
COMMD3-213ENST00000483684 PHF24Q9UPV7 400 aa10.08□□□□□ -0.8
COMMD3-213ENST00000483684 MYCP01106 439 aaPredicted RBP10.07□□□□□ -0.8
COMMD3-213ENST00000483684 C4orf17Q53FE4 359 aa10.07□□□□□ -0.8
COMMD3-213ENST00000483684 PHTF2Q8N3S3 785 aa10.06□□□□□ -0.8
COMMD3-213ENST00000483684 GALNT6Q8NCL4 622 aa10.06□□□□□ -0.8
COMMD3-213ENST00000483684 GDF2Q9UK05 429 aaPredicted RBP10.06□□□□□ -0.8
COMMD3-213ENST00000483684 KRBA1A5PL33 1030 aa10.05□□□□□ -0.8
COMMD3-213ENST00000483684 APBB1O00213 710 aa10.05□□□□□ -0.8
COMMD3-213ENST00000483684 NDFIP2Q9NV92 336 aa10.05□□□□□ -0.8
COMMD3-213ENST00000483684 HOXB4P17483 251 aaPredicted RBP10.04□□□□□ -0.8
COMMD3-213ENST00000483684 MSX1P28360 303 aa10.04□□□□□ -0.8
COMMD3-213ENST00000483684 BRPF1P55201 1214 aaPredicted RBP10.04□□□□□ -0.8
COMMD3-213ENST00000483684 TSGA10IPQ3SY00 556 aa10.04□□□□□ -0.8
COMMD3-213ENST00000483684 ESCO1Q5FWF5 840 aa10.04□□□□□ -0.8
COMMD3-213ENST00000483684 GNASQ5JWF2 1037 aa10.04□□□□□ -0.8
COMMD3-213ENST00000483684 EDARADDQ8WWZ3 215 aa10.04□□□□□ -0.8
COMMD3-213ENST00000483684 RUBCNLQ9H714 662 aa10.04□□□□□ -0.8
COMMD3-213ENST00000483684 MKL2Q9ULH7 1088 aa10.04□□□□□ -0.8
COMMD3-213ENST00000483684 ATXN7L1Q9ULK2 861 aaPredicted RBP10.04□□□□□ -0.8
COMMD3-213ENST00000483684 C2CD2LO14523 706 aa10.03□□□□□ -0.8
COMMD3-213ENST00000483684 TMEM214Q6NUQ4 689 aaKnown RBP10.03□□□□□ -0.8
COMMD3-213ENST00000483684 ALYREFQ86V81 257 aaKnown RBP10.03□□□□□ -0.8
COMMD3-213ENST00000483684 ETNK1Q9HBU6 452 aa10.03□□□□□ -0.8
COMMD3-213ENST00000483684 CSB-PGBD3P0DP91 1061 aa10.02□□□□□ -0.81
COMMD3-213ENST00000483684 COL8A1P27658 744 aa10.02□□□□□ -0.81
COMMD3-213ENST00000483684 PPARGC1BQ86YN6 1023 aaKnown RBP10.02□□□□□ -0.81
COMMD3-213ENST00000483684 PGBD3Q8N328 593 aa10.02□□□□□ -0.81
COMMD3-213ENST00000483684 GOLGA6L1Q8N7Z2 621 aa10.02□□□□□ -0.81
COMMD3-213ENST00000483684 RHBDD1Q8TEB9 315 aa10.02□□□□□ -0.81
COMMD3-213ENST00000483684 CRISPLD1Q9H336 500 aa10.02□□□□□ -0.81
COMMD3-213ENST00000483684 CHIC2Q9UKJ5 165 aa10.02□□□□□ -0.81
COMMD3-213ENST00000483684 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.01□□□□□ -0.81
COMMD3-213ENST00000483684 BNIP3LO60238 219 aa10.01□□□□□ -0.81
COMMD3-213ENST00000483684 STAU1O95793 577 aaKnown RBP10.01□□□□□ -0.81
COMMD3-213ENST00000483684 GTF2E1P29083 439 aaPredicted RBP10.01□□□□□ -0.81
COMMD3-213ENST00000483684 USP4Q13107 963 aa10.01□□□□□ -0.81
COMMD3-213ENST00000483684 EFHC2Q5JST6 749 aa10□□□□□ -0.81
COMMD3-213ENST00000483684 LINC00114Q6XXX2 140 aa10□□□□□ -0.81
COMMD3-213ENST00000483684 FGFR3P22607 806 aa9.99□□□□□ -0.81
COMMD3-213ENST00000483684 CTBSQ01459 385 aa9.99□□□□□ -0.81
COMMD3-213ENST00000483684 SLCO4C1Q6ZQN7 724 aa9.99□□□□□ -0.81
COMMD3-213ENST00000483684 ABHD17AQ96GS6 310 aa9.99□□□□□ -0.81
COMMD3-213ENST00000483684 DNAAF2Q9NVR5 837 aaKnown RBP9.99□□□□□ -0.81
COMMD3-213ENST00000483684 DOLKQ9UPQ8 538 aa9.99□□□□□ -0.81
COMMD3-213ENST00000483684 TBC1D2BQ9UPU7 963 aa9.99□□□□□ -0.81
COMMD3-213ENST00000483684 BMP4P12644 408 aa9.98□□□□□ -0.81
COMMD3-213ENST00000483684 EIF4G2P78344 907 aaKnown RBP eCLIP9.98□□□□□ -0.81
COMMD3-213ENST00000483684 IRF5Q13568 498 aa9.98□□□□□ -0.81
COMMD3-213ENST00000483684 KRTAP9-2Q9BYQ4 174 aa9.98□□□□□ -0.81
COMMD3-213ENST00000483684 BAG6P46379 1132 aa9.97□□□□□ -0.81
COMMD3-213ENST00000483684 TLR1Q15399 786 aa9.97□□□□□ -0.81
COMMD3-213ENST00000483684 RRAGCQ9HB90 399 aa9.97□□□□□ -0.81
COMMD3-213ENST00000483684 GGA1Q9UJY5 639 aa9.97□□□□□ -0.81
COMMD3-213ENST00000483684 SCNN1DP51172 638 aa9.96□□□□□ -0.82
COMMD3-213ENST00000483684 SUV39H2Q9H5I1 410 aa9.96□□□□□ -0.82
COMMD3-213ENST00000483684 K7ELQ4 463 aaPredicted RBP9.95□□□□□ -0.82
COMMD3-213ENST00000483684 EPXP11678 715 aa9.95□□□□□ -0.82
COMMD3-213ENST00000483684 SLFNL1Q499Z3 407 aa9.95□□□□□ -0.82
COMMD3-213ENST00000483684 KRTAP9-6A0A140TA67 174 aa9.94□□□□□ -0.82
COMMD3-213ENST00000483684 ARAFP10398 606 aa9.94□□□□□ -0.82
COMMD3-213ENST00000483684 ATP4AP20648 1035 aa9.94□□□□□ -0.82
COMMD3-213ENST00000483684 PLA2G4AP47712 749 aa9.94□□□□□ -0.82
COMMD3-213ENST00000483684 RNF135Q8IUD6 432 aa9.94□□□□□ -0.82
COMMD3-213ENST00000483684 C1orf216Q8TAB5 229 aa9.94□□□□□ -0.82
COMMD3-213ENST00000483684 SIRT1Q96EB6 747 aa9.94□□□□□ -0.82
COMMD3-213ENST00000483684 BTBD6Q96KE9 485 aa9.94□□□□□ -0.82
COMMD3-213ENST00000483684 HCN2Q9UL51 889 aa9.94□□□□□ -0.82
COMMD3-213ENST00000483684 INHAP05111 366 aa9.93□□□□□ -0.82
COMMD3-213ENST00000483684 FIGNL1Q6PIW4 674 aa9.93□□□□□ -0.82
COMMD3-213ENST00000483684 TBC1D9Q6ZT07 1266 aa9.93□□□□□ -0.82
COMMD3-213ENST00000483684 NLRP8Q86W28 1048 aa9.93□□□□□ -0.82
COMMD3-213ENST00000483684 ZCCHC2Q9C0B9 1178 aaKnown RBP9.93□□□□□ -0.82
COMMD3-213ENST00000483684 DGKGP49619 791 aa9.92□□□□□ -0.82
COMMD3-213ENST00000483684 OXLD1Q5BKU9 147 aa9.92□□□□□ -0.82
COMMD3-213ENST00000483684 ZNF295-AS1Q8N0V1 137 aa9.92□□□□□ -0.82
COMMD3-213ENST00000483684 PCDHGC4Q9Y5F7 938 aa9.92□□□□□ -0.82
COMMD3-213ENST00000483684 GNB5O14775 395 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms