RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 SLC52A2Q9HAB3 445 aa20.84■□□□□ 0.93
RFTN1-209ENST00000483671 KIF16BQ96L93 1317 aa20.83■□□□□ 0.93
RFTN1-209ENST00000483671 HOXB7P09629 217 aa20.83■□□□□ 0.93
RFTN1-209ENST00000483671 VPS72Q15906 364 aa20.83■□□□□ 0.93
RFTN1-209ENST00000483671 USP35Q9P2H5 1018 aa20.83■□□□□ 0.93
RFTN1-209ENST00000483671 TNS2Q63HR2 1409 aa20.83■□□□□ 0.92
RFTN1-209ENST00000483671 BTBD11A6QL63 1104 aa20.82■□□□□ 0.92
RFTN1-209ENST00000483671 NGLY1Q96IV0 654 aa20.82■□□□□ 0.92
RFTN1-209ENST00000483671 C8orf37Q96NL8 207 aa20.82■□□□□ 0.92
RFTN1-209ENST00000483671 ERVV-2B6SEH9 535 aa20.81■□□□□ 0.92
RFTN1-209ENST00000483671 EIF4A1P60842 406 aaKnown RBP20.81■□□□□ 0.92
RFTN1-209ENST00000483671 BCL2L13Q9BXK5 485 aa20.81■□□□□ 0.92
RFTN1-209ENST00000483671 HEG1Q9ULI3 1381 aa20.81■□□□□ 0.92
RFTN1-209ENST00000483671 KRT24Q2M2I5 525 aa20.8■□□□□ 0.92
RFTN1-209ENST00000483671 ZKSCAN2Q63HK3 967 aa20.8■□□□□ 0.92
RFTN1-209ENST00000483671 MRPL50Q8N5N7 158 aaKnown RBP20.8■□□□□ 0.92
RFTN1-209ENST00000483671 PPP4R2Q9NY27 417 aa20.8■□□□□ 0.92
RFTN1-209ENST00000483671 ELL2O00472 640 aaPredicted RBP20.79■□□□□ 0.92
RFTN1-209ENST00000483671 MS4A1P11836 297 aa20.79■□□□□ 0.92
RFTN1-209ENST00000483671 C20orf194Q5TEA3 1177 aa20.79■□□□□ 0.92
RFTN1-209ENST00000483671 ARHGAP45Q92619 1136 aa20.79■□□□□ 0.92
RFTN1-209ENST00000483671 CHMP4AQ9BY43 222 aa20.79■□□□□ 0.92
RFTN1-209ENST00000483671 IPO8O15397 1037 aaKnown RBP20.78■□□□□ 0.92
RFTN1-209ENST00000483671 EXOC5O00471 708 aa20.78■□□□□ 0.92
RFTN1-209ENST00000483671 CANXP27824 592 aaKnown RBP20.78■□□□□ 0.92
RFTN1-209ENST00000483671 ATF7IPQ6VMQ6 1270 aa20.77■□□□□ 0.91
RFTN1-209ENST00000483671 NFATC2IPQ8NCF5 419 aa20.77■□□□□ 0.91
RFTN1-209ENST00000483671 DDX54Q8TDD1 881 aaKnown RBP20.77■□□□□ 0.91
RFTN1-209ENST00000483671 FRAT1Q92837 279 aaPredicted RBP20.77■□□□□ 0.91
RFTN1-209ENST00000483671 CABP4P57796 275 aa20.76■□□□□ 0.91
RFTN1-209ENST00000483671 ZNF790Q6PG37 636 aa20.76■□□□□ 0.91
RFTN1-209ENST00000483671 EXOC6Q8TAG9 804 aa20.76■□□□□ 0.91
RFTN1-209ENST00000483671 CRBNQ96SW2 442 aa20.76■□□□□ 0.91
RFTN1-209ENST00000483671 USP21Q9UK80 565 aa20.76■□□□□ 0.91
RFTN1-209ENST00000483671 NOB1Q9ULX3 412 aaKnown RBP20.76■□□□□ 0.91
RFTN1-209ENST00000483671 KCNQ3O43525 872 aa20.75■□□□□ 0.91
RFTN1-209ENST00000483671 TRIM27P14373 513 aa20.75■□□□□ 0.91
RFTN1-209ENST00000483671 TOGARAM1Q9Y4F4 1720 aa20.74■□□□□ 0.91
RFTN1-209ENST00000483671 MEX3CQ5U5Q3 659 aaKnown RBP20.74■□□□□ 0.91
RFTN1-209ENST00000483671 CCDC30Q5VVM6 783 aa20.74■□□□□ 0.91
RFTN1-209ENST00000483671 AAMPQ13685 434 aa20.73■□□□□ 0.91
RFTN1-209ENST00000483671 DDB1Q16531 1140 aa20.73■□□□□ 0.91
RFTN1-209ENST00000483671 DZIP1LQ8IYY4 767 aaKnown RBP20.73■□□□□ 0.91
RFTN1-209ENST00000483671 PAPPAQ13219 1627 aa20.72■□□□□ 0.91
RFTN1-209ENST00000483671 CACNA1FO60840 1977 aa20.72■□□□□ 0.91
RFTN1-209ENST00000483671 GIGYF1O75420 1035 aaPredicted RBP20.72■□□□□ 0.91
RFTN1-209ENST00000483671 CCDC9Q9Y3X0 531 aaKnown RBP20.72■□□□□ 0.91
RFTN1-209ENST00000483671 ATRNO75882 1429 aa20.72■□□□□ 0.91
RFTN1-209ENST00000483671 PTPRCP08575 1304 aa20.71■□□□□ 0.91
RFTN1-209ENST00000483671 RLBP1P12271 317 aa20.71■□□□□ 0.91
RFTN1-209ENST00000483671 PANK1Q8TE04 598 aa20.71■□□□□ 0.91
RFTN1-209ENST00000483671 API5Q9BZZ5 524 aaKnown RBP20.71■□□□□ 0.91
RFTN1-209ENST00000483671 AFF2P51816 1311 aa20.7■□□□□ 0.9
RFTN1-209ENST00000483671 THSD7AQ9UPZ6 1657 aa20.7■□□□□ 0.9
RFTN1-209ENST00000483671 STK31Q9BXU1 1019 aa20.7■□□□□ 0.9
RFTN1-209ENST00000483671 UBR2Q8IWV8 1755 aa20.69■□□□□ 0.9
RFTN1-209ENST00000483671 GLI3P10071 1580 aa20.69■□□□□ 0.9
RFTN1-209ENST00000483671 HDGFL1Q5TGJ6 251 aa20.69■□□□□ 0.9
RFTN1-209ENST00000483671 FTSJ3Q8IY81 847 aaKnown RBP20.69■□□□□ 0.9
RFTN1-209ENST00000483671 ABCC4O15439 1325 aa20.69■□□□□ 0.9
RFTN1-209ENST00000483671 SLC4A2P04920 1241 aa20.68■□□□□ 0.9
RFTN1-209ENST00000483671 SLC39A6Q13433 755 aa20.68■□□□□ 0.9
RFTN1-209ENST00000483671 MVPQ14764 893 aaKnown RBP20.68■□□□□ 0.9
RFTN1-209ENST00000483671 TTC5Q8N0Z6 440 aa20.68■□□□□ 0.9
RFTN1-209ENST00000483671 TNNQ9UQP3 1299 aa20.68■□□□□ 0.9
RFTN1-209ENST00000483671 RGS12O14924 1447 aa20.67■□□□□ 0.9
RFTN1-209ENST00000483671 TCERG1O14776 1098 aaKnown RBP20.67■□□□□ 0.9
RFTN1-209ENST00000483671 ZNF496Q96IT1 587 aaPredicted RBP20.67■□□□□ 0.9
RFTN1-209ENST00000483671 FMNL2Q96PY5 1086 aa20.67■□□□□ 0.9
RFTN1-209ENST00000483671 TMOD3Q9NYL9 352 aa20.67■□□□□ 0.9
RFTN1-209ENST00000483671 TRPC5Q9UL62 973 aaPredicted RBP20.67■□□□□ 0.9
RFTN1-209ENST00000483671 BCL9O00512 1426 aa20.66■□□□□ 0.9
RFTN1-209ENST00000483671 KCPQ6ZWJ8 1503 aa20.66■□□□□ 0.9
RFTN1-209ENST00000483671 ONECUT3O60422 494 aaPredicted RBP20.66■□□□□ 0.9
RFTN1-209ENST00000483671 MARCH10Q8NA82 808 aaPredicted RBP20.66■□□□□ 0.9
RFTN1-209ENST00000483671 GJD4Q96KN9 370 aaPredicted RBP20.66■□□□□ 0.9
RFTN1-209ENST00000483671 COG6Q9Y2V7 657 aa20.66■□□□□ 0.9
RFTN1-209ENST00000483671 SNRPA1P09661 255 aaKnown RBP20.65■□□□□ 0.9
RFTN1-209ENST00000483671 FAM98CQ17RN3 349 aaKnown RBP20.65■□□□□ 0.9
RFTN1-209ENST00000483671 CLUAP1Q96AJ1 413 aa20.65■□□□□ 0.9
RFTN1-209ENST00000483671 ITGB4P16144 1822 aa20.65■□□□□ 0.9
RFTN1-209ENST00000483671 PIGBQ92521 554 aa20.63■□□□□ 0.89
RFTN1-209ENST00000483671 DBF4Q9UBU7 674 aaPredicted RBP20.63■□□□□ 0.89
RFTN1-209ENST00000483671 DDX19BQ9UMR2 479 aa20.63■□□□□ 0.89
RFTN1-209ENST00000483671 C5P01031 1676 aa20.63■□□□□ 0.89
RFTN1-209ENST00000483671 FLIIQ13045 1269 aa20.62■□□□□ 0.89
RFTN1-209ENST00000483671 TMEM57Q8N5G2 664 aa20.62■□□□□ 0.89
RFTN1-209ENST00000483671 CCDC136Q96JN2 1154 aa20.62■□□□□ 0.89
RFTN1-209ENST00000483671 DOT1LQ8TEK3 1739 aa20.62■□□□□ 0.89
RFTN1-209ENST00000483671 LAMB4A4D0S4 1761 aa20.61■□□□□ 0.89
RFTN1-209ENST00000483671 INTS3Q68E01 1043 aaKnown RBP20.61■□□□□ 0.89
RFTN1-209ENST00000483671 G2E3Q7L622 706 aa20.61■□□□□ 0.89
RFTN1-209ENST00000483671 ERBB4Q15303 1308 aa20.6■□□□□ 0.89
RFTN1-209ENST00000483671 EIF2S2P20042 333 aaKnown RBP20.6■□□□□ 0.89
RFTN1-209ENST00000483671 B4GALNT3Q6L9W6 998 aa20.6■□□□□ 0.89
RFTN1-209ENST00000483671 VSIG10Q8N0Z9 540 aa20.6■□□□□ 0.89
RFTN1-209ENST00000483671 FBXO41Q8TF61 875 aa20.6■□□□□ 0.89
RFTN1-209ENST00000483671 CHMP4BQ9H444 224 aaKnown RBP20.6■□□□□ 0.89
RFTN1-209ENST00000483671 CHPF2Q9P2E5 772 aa20.6■□□□□ 0.89
RFTN1-209ENST00000483671 PXDNLA1KZ92 1463 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms