RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 TIMMDC1Q9NPL8 285 aa8.18□□□□□ -1.1
NSMCE4A-210ENST00000483541 F11P03951 625 aa8.17□□□□□ -1.1
NSMCE4A-210ENST00000483541 DBN1Q16643 649 aa8.17□□□□□ -1.1
NSMCE4A-210ENST00000483541 RIPOR1Q6ZS17 1223 aa8.17□□□□□ -1.1
NSMCE4A-210ENST00000483541 ETNK1Q9HBU6 452 aa8.17□□□□□ -1.1
NSMCE4A-210ENST00000483541 FOXK2Q01167 660 aa8.16□□□□□ -1.1
NSMCE4A-210ENST00000483541 GNASQ5JWF2 1037 aa8.16□□□□□ -1.1
NSMCE4A-210ENST00000483541 ZNF837Q96EG3 531 aaPredicted RBP8.16□□□□□ -1.1
NSMCE4A-210ENST00000483541 GAS2L1Q99501 681 aaPredicted RBP8.16□□□□□ -1.1
NSMCE4A-210ENST00000483541 INHAP05111 366 aa8.15□□□□□ -1.1
NSMCE4A-210ENST00000483541 TMEM214Q6NUQ4 689 aaKnown RBP8.15□□□□□ -1.1
NSMCE4A-210ENST00000483541 PPARGC1BQ86YN6 1023 aaKnown RBP8.15□□□□□ -1.1
NSMCE4A-210ENST00000483541 A0A1B0GTH6 734 aa8.14□□□□□ -1.11
NSMCE4A-210ENST00000483541 SCNN1DP51172 638 aa8.14□□□□□ -1.11
NSMCE4A-210ENST00000483541 SRSF11Q05519 484 aaKnown RBP8.14□□□□□ -1.11
NSMCE4A-210ENST00000483541 ZNF385CQ66K41 422 aaPredicted RBP8.14□□□□□ -1.11
NSMCE4A-210ENST00000483541 PIK3CDO00329 1044 aa8.13□□□□□ -1.11
NSMCE4A-210ENST00000483541 GDF10P55107 478 aa8.13□□□□□ -1.11
NSMCE4A-210ENST00000483541 GAS6Q14393 721 aa8.13□□□□□ -1.11
NSMCE4A-210ENST00000483541 EML3Q32P44 896 aa8.13□□□□□ -1.11
NSMCE4A-210ENST00000483541 KANK3Q6NY19 840 aa8.13□□□□□ -1.11
NSMCE4A-210ENST00000483541 RHBDD1Q8TEB9 315 aa8.13□□□□□ -1.11
NSMCE4A-210ENST00000483541 SKIP12755 728 aa8.12□□□□□ -1.11
NSMCE4A-210ENST00000483541 LBRQ14739 615 aaKnown RBP8.12□□□□□ -1.11
NSMCE4A-210ENST00000483541 TLR1Q15399 786 aa8.12□□□□□ -1.11
NSMCE4A-210ENST00000483541 C4orf17Q53FE4 359 aa8.12□□□□□ -1.11
NSMCE4A-210ENST00000483541 GPAT2Q6NUI2 795 aa8.12□□□□□ -1.11
NSMCE4A-210ENST00000483541 TRERF1Q96PN7 1200 aa8.12□□□□□ -1.11
NSMCE4A-210ENST00000483541 SLC4A9Q96Q91 983 aa8.12□□□□□ -1.11
NSMCE4A-210ENST00000483541 NOD1Q9Y239 953 aa8.12□□□□□ -1.11
NSMCE4A-210ENST00000483541 PCDHGA11Q9Y5H2 935 aa8.12□□□□□ -1.11
NSMCE4A-210ENST00000483541 ARHGEF15O94989 841 aa8.11□□□□□ -1.11
NSMCE4A-210ENST00000483541 ADAMTS2O95450 1211 aa8.11□□□□□ -1.11
NSMCE4A-210ENST00000483541 SMTNP53814 917 aa8.11□□□□□ -1.11
NSMCE4A-210ENST00000483541 GTPBP3Q969Y2 492 aaKnown RBP8.11□□□□□ -1.11
NSMCE4A-210ENST00000483541 NUCKS1Q9H1E3 243 aaKnown RBP8.11□□□□□ -1.11
NSMCE4A-210ENST00000483541 MBIPQ9NS73 344 aa8.11□□□□□ -1.11
NSMCE4A-210ENST00000483541 STAU1O95793 577 aaKnown RBP8.1□□□□□ -1.11
NSMCE4A-210ENST00000483541 PHKA2P46019 1235 aa8.1□□□□□ -1.11
NSMCE4A-210ENST00000483541 XP32Q5T750 250 aa8.1□□□□□ -1.11
NSMCE4A-210ENST00000483541 SVOPQ8N4V2 548 aa8.1□□□□□ -1.11
NSMCE4A-210ENST00000483541 CFHR5Q9BXR6 569 aa8.1□□□□□ -1.11
NSMCE4A-210ENST00000483541 TMEM229AB2RXF0 380 aa8.09□□□□□ -1.11
NSMCE4A-210ENST00000483541 CDK2AP1O14519 115 aa8.09□□□□□ -1.11
NSMCE4A-210ENST00000483541 CSB-PGBD3P0DP91 1061 aa8.09□□□□□ -1.11
NSMCE4A-210ENST00000483541 HDGFL1Q5TGJ6 251 aa8.09□□□□□ -1.11
NSMCE4A-210ENST00000483541 PGBD3Q8N328 593 aa8.09□□□□□ -1.11
NSMCE4A-210ENST00000483541 C1orf216Q8TAB5 229 aa8.09□□□□□ -1.11
NSMCE4A-210ENST00000483541 NIFKQ9BYG3 293 aaKnown RBP8.09□□□□□ -1.11
NSMCE4A-210ENST00000483541 POM121CA8CG34 1229 aa8.08□□□□□ -1.12
NSMCE4A-210ENST00000483541 BACH1O14867 736 aa8.08□□□□□ -1.12
NSMCE4A-210ENST00000483541 MSX1P28360 303 aa8.08□□□□□ -1.12
NSMCE4A-210ENST00000483541 IRS1P35568 1242 aa8.08□□□□□ -1.12
NSMCE4A-210ENST00000483541 NCOA4Q13772 614 aa8.08□□□□□ -1.12
NSMCE4A-210ENST00000483541 MTFR1Q15390 333 aa8.08□□□□□ -1.12
NSMCE4A-210ENST00000483541 PLEKHM2Q8IWE5 1019 aa8.08□□□□□ -1.12
NSMCE4A-210ENST00000483541 FNBP4Q8N3X1 1017 aaPredicted RBP8.08□□□□□ -1.12
NSMCE4A-210ENST00000483541 ADAMTS19Q8TE59 1207 aa8.08□□□□□ -1.12
NSMCE4A-210ENST00000483541 A6NJY4 79 aa8.07□□□□□ -1.12
NSMCE4A-210ENST00000483541 USP17L5A8MUK1 530 aa8.07□□□□□ -1.12
NSMCE4A-210ENST00000483541 GPR25O00155 361 aa8.07□□□□□ -1.12
NSMCE4A-210ENST00000483541 GTF2IP78347 998 aa8.07□□□□□ -1.12
NSMCE4A-210ENST00000483541 TRIM50Q86XT4 487 aa8.07□□□□□ -1.12
NSMCE4A-210ENST00000483541 WHAMMQ8TF30 809 aa8.07□□□□□ -1.12
NSMCE4A-210ENST00000483541 GPAMQ9HCL2 828 aa8.07□□□□□ -1.12
NSMCE4A-210ENST00000483541 NSFL1CQ9UNZ2 370 aaKnown RBP8.07□□□□□ -1.12
NSMCE4A-210ENST00000483541 PHF24Q9UPV7 400 aa8.07□□□□□ -1.12
NSMCE4A-210ENST00000483541 THBS1P07996 1170 aa8.06□□□□□ -1.12
NSMCE4A-210ENST00000483541 MX2P20592 715 aa8.06□□□□□ -1.12
NSMCE4A-210ENST00000483541 EFHC2Q5JST6 749 aa8.06□□□□□ -1.12
NSMCE4A-210ENST00000483541 TBC1D9Q6ZT07 1266 aa8.06□□□□□ -1.12
NSMCE4A-210ENST00000483541 SCARF2Q96GP6 870 aaPredicted RBP8.06□□□□□ -1.12
NSMCE4A-210ENST00000483541 CRISPLD1Q9H336 500 aa8.06□□□□□ -1.12
NSMCE4A-210ENST00000483541 LRRC4BQ9NT99 713 aa8.06□□□□□ -1.12
NSMCE4A-210ENST00000483541 IQSEC3Q9UPP2 1182 aaPredicted RBP8.06□□□□□ -1.12
NSMCE4A-210ENST00000483541 IGF1RP08069 1367 aa8.06□□□□□ -1.12
NSMCE4A-210ENST00000483541 A6NJR5 290 aa8.05□□□□□ -1.12
NSMCE4A-210ENST00000483541 ATP9BO43861 1147 aa8.05□□□□□ -1.12
NSMCE4A-210ENST00000483541 UBAP2LQ14157 1087 aaKnown RBP8.05□□□□□ -1.12
NSMCE4A-210ENST00000483541 LYPD4Q6UWN0 246 aa8.05□□□□□ -1.12
NSMCE4A-210ENST00000483541 PROSER2Q86WR7 435 aaPredicted RBP8.05□□□□□ -1.12
NSMCE4A-210ENST00000483541 ZNF295-AS1Q8N0V1 137 aa8.05□□□□□ -1.12
NSMCE4A-210ENST00000483541 ENAMQ9NRM1 1142 aa8.05□□□□□ -1.12
NSMCE4A-210ENST00000483541 SERTAD1Q9UHV2 236 aa8.05□□□□□ -1.12
NSMCE4A-210ENST00000483541 CELA2BP08218 269 aaPredicted RBP8.04□□□□□ -1.12
NSMCE4A-210ENST00000483541 PLA2G4AP47712 749 aa8.04□□□□□ -1.12
NSMCE4A-210ENST00000483541 ATP1A2P50993 1020 aa8.04□□□□□ -1.12
NSMCE4A-210ENST00000483541 MAP3K10Q02779 954 aa8.04□□□□□ -1.12
NSMCE4A-210ENST00000483541 DEPDC4Q8N2C3 294 aa8.04□□□□□ -1.12
NSMCE4A-210ENST00000483541 CLUAP1Q96AJ1 413 aa8.04□□□□□ -1.12
NSMCE4A-210ENST00000483541 UCN2Q96RP3 112 aa8.04□□□□□ -1.12
NSMCE4A-210ENST00000483541 RUBCNLQ9H714 662 aa8.04□□□□□ -1.12
NSMCE4A-210ENST00000483541 MAP2K3P46734 347 aa8.03□□□□□ -1.12
NSMCE4A-210ENST00000483541 MARSP56192 900 aaKnown RBP8.03□□□□□ -1.12
NSMCE4A-210ENST00000483541 PSME1Q06323 249 aa8.03□□□□□ -1.12
NSMCE4A-210ENST00000483541 FIGNL1Q6PIW4 674 aa8.03□□□□□ -1.12
NSMCE4A-210ENST00000483541 NLRP8Q86W28 1048 aa8.03□□□□□ -1.12
NSMCE4A-210ENST00000483541 SCHIP1Q9P0W5 487 aaPredicted RBP8.03□□□□□ -1.12
NSMCE4A-210ENST00000483541 ATXN7L1Q9ULK2 861 aaPredicted RBP8.03□□□□□ -1.12
NSMCE4A-210ENST00000483541 USP17L3A6NCW0 530 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms