RNA–Protein interactions for RNA: ENST00000483454.1

PCOLCE2-206, Transcript of procollagen C-endopeptidase enhancer 2, humanhuman

TSL 2

Gene PCOLCE2, Length 666 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE2-206ENST00000483454 PHKG2P15735 406 aa17.03■□□□□ 0.32
PCOLCE2-206ENST00000483454 SCN11AQ9UI33 1791 aa17.02■□□□□ 0.32
PCOLCE2-206ENST00000483454 GNPATO15228 680 aa17.02■□□□□ 0.32
PCOLCE2-206ENST00000483454 ATP6V1AP38606 617 aa17.02■□□□□ 0.32
PCOLCE2-206ENST00000483454 POLKQ9UBT6 870 aa17.02■□□□□ 0.32
PCOLCE2-206ENST00000483454 ASAP1Q9ULH1 1129 aa17.02■□□□□ 0.32
PCOLCE2-206ENST00000483454 TRIM26Q12899 539 aaPredicted RBP17.01■□□□□ 0.31
PCOLCE2-206ENST00000483454 ITPK1Q13572 414 aa17.01■□□□□ 0.31
PCOLCE2-206ENST00000483454 CEP350Q5VT06 3117 aa17.01■□□□□ 0.31
PCOLCE2-206ENST00000483454 KDRP35968 1356 aa17.01■□□□□ 0.31
PCOLCE2-206ENST00000483454 WWC3Q9ULE0 1092 aa17■□□□□ 0.31
PCOLCE2-206ENST00000483454 EIF4A2Q14240 407 aaKnown RBP16.99■□□□□ 0.31
PCOLCE2-206ENST00000483454 POLR3GLQ9BT43 218 aa16.99■□□□□ 0.31
PCOLCE2-206ENST00000483454 ATG3Q9NT62 314 aa16.99■□□□□ 0.31
PCOLCE2-206ENST00000483454 TIMELESSQ9UNS1 1208 aa16.99■□□□□ 0.31
PCOLCE2-206ENST00000483454 ZNF526Q8TF50 670 aaPredicted RBP16.98■□□□□ 0.31
PCOLCE2-206ENST00000483454 TJP1Q07157 1748 aa16.98■□□□□ 0.31
PCOLCE2-206ENST00000483454 PXDNLA1KZ92 1463 aa16.98■□□□□ 0.31
PCOLCE2-206ENST00000483454 TNNT2P45379 298 aaPredicted RBP16.97■□□□□ 0.31
PCOLCE2-206ENST00000483454 ERVV-2B6SEH9 535 aa16.96■□□□□ 0.31
PCOLCE2-206ENST00000483454 HSP90AB1P08238 724 aaKnown RBP16.96■□□□□ 0.31
PCOLCE2-206ENST00000483454 MMP10P09238 476 aa16.96■□□□□ 0.31
PCOLCE2-206ENST00000483454 RTCBQ9Y3I0 505 aaKnown RBP16.96■□□□□ 0.31
PCOLCE2-206ENST00000483454 SBF1O95248 1867 aa16.96■□□□□ 0.31
PCOLCE2-206ENST00000483454 TRAPPC3LQ5T215 181 aa16.95■□□□□ 0.3
PCOLCE2-206ENST00000483454 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
PCOLCE2-206ENST00000483454 KDM6AO15550 1401 aaPredicted RBP16.95■□□□□ 0.3
PCOLCE2-206ENST00000483454 C10orf71Q711Q0 1435 aa16.95■□□□□ 0.3
PCOLCE2-206ENST00000483454 HSPA6P17066 643 aa16.94■□□□□ 0.3
PCOLCE2-206ENST00000483454 DCAF5Q96JK2 942 aa16.94■□□□□ 0.3
PCOLCE2-206ENST00000483454 CNTNAP4Q9C0A0 1308 aa16.94■□□□□ 0.3
PCOLCE2-206ENST00000483454 ADRA2BP18089 450 aa16.93■□□□□ 0.3
PCOLCE2-206ENST00000483454 PLEKHO1Q53GL0 409 aaPredicted RBP16.93■□□□□ 0.3
PCOLCE2-206ENST00000483454 NLGN1Q8N2Q7 840 aa16.93■□□□□ 0.3
PCOLCE2-206ENST00000483454 SLC4A9Q96Q91 983 aa16.93■□□□□ 0.3
PCOLCE2-206ENST00000483454 AFDNP55196 1824 aaKnown RBP16.93■□□□□ 0.3
PCOLCE2-206ENST00000483454 TGFB2P61812 414 aa16.92■□□□□ 0.3
PCOLCE2-206ENST00000483454 RC3H1Q5TC82 1133 aaKnown RBP16.92■□□□□ 0.3
PCOLCE2-206ENST00000483454 CCDC88AQ3V6T2 1871 aa16.92■□□□□ 0.3
PCOLCE2-206ENST00000483454 CLSPNQ9HAW4 1339 aa16.92■□□□□ 0.3
PCOLCE2-206ENST00000483454 ZNF530Q6P9A1 599 aaPredicted RBP16.91■□□□□ 0.3
PCOLCE2-206ENST00000483454 CCDC87Q9NVE4 849 aa16.91■□□□□ 0.3
PCOLCE2-206ENST00000483454 ADAMTS7Q9UKP4 1686 aa16.91■□□□□ 0.3
PCOLCE2-206ENST00000483454 RFC4P35249 363 aa16.9■□□□□ 0.3
PCOLCE2-206ENST00000483454 CABP4P57796 275 aa16.9■□□□□ 0.3
PCOLCE2-206ENST00000483454 AMOTQ4VCS5 1084 aa16.9■□□□□ 0.3
PCOLCE2-206ENST00000483454 IFFO2Q5TF58 517 aa16.9■□□□□ 0.3
PCOLCE2-206ENST00000483454 ARHGEF1Q92888 912 aaKnown RBP16.9■□□□□ 0.3
PCOLCE2-206ENST00000483454 BCS1LQ9Y276 419 aa16.9■□□□□ 0.3
PCOLCE2-206ENST00000483454 KIF3CO14782 793 aa16.89■□□□□ 0.29
PCOLCE2-206ENST00000483454 RPS6KA4O75676 772 aa16.89■□□□□ 0.29
PCOLCE2-206ENST00000483454 GYS1P13807 737 aa16.89■□□□□ 0.29
PCOLCE2-206ENST00000483454 PANK3Q9H999 370 aa16.89■□□□□ 0.29
PCOLCE2-206ENST00000483454 PARP3Q9Y6F1 533 aa16.89■□□□□ 0.29
PCOLCE2-206ENST00000483454 WDR90Q96KV7 1748 aa16.89■□□□□ 0.29
PCOLCE2-206ENST00000483454 DLEC1Q9Y238 1755 aa16.89■□□□□ 0.29
PCOLCE2-206ENST00000483454 A0A0G2JLW4 131 aa16.88■□□□□ 0.29
PCOLCE2-206ENST00000483454 C1orf141Q5JVX7 400 aa16.88■□□□□ 0.29
PCOLCE2-206ENST00000483454 TNRC6CQ9HCJ0 1690 aaKnown RBP16.88■□□□□ 0.29
PCOLCE2-206ENST00000483454 MTHFSP49914 203 aa16.87■□□□□ 0.29
PCOLCE2-206ENST00000483454 EIF4G2P78344 907 aaKnown RBP eCLIP16.87■□□□□ 0.29
PCOLCE2-206ENST00000483454 DPEP1P16444 411 aa16.86■□□□□ 0.29
PCOLCE2-206ENST00000483454 AEBP1Q8IUX7 1158 aa16.86■□□□□ 0.29
PCOLCE2-206ENST00000483454 UBR2Q8IWV8 1755 aa16.85■□□□□ 0.29
PCOLCE2-206ENST00000483454 PTCD1O75127 700 aaKnown RBP16.85■□□□□ 0.29
PCOLCE2-206ENST00000483454 FCHSD2O94868 740 aa16.85■□□□□ 0.29
PCOLCE2-206ENST00000483454 HSPA5P11021 654 aaKnown RBP16.85■□□□□ 0.29
PCOLCE2-206ENST00000483454 ARHGAP27Q6ZUM4 889 aa16.85■□□□□ 0.29
PCOLCE2-206ENST00000483454 MORC1Q86VD1 984 aa16.85■□□□□ 0.29
PCOLCE2-206ENST00000483454 CRKLP46109 303 aaKnown RBP16.84■□□□□ 0.29
PCOLCE2-206ENST00000483454 NRXN2Q9P2S2 1712 aa16.84■□□□□ 0.29
PCOLCE2-206ENST00000483454 SULT6B1Q6IMI4 303 aa16.83■□□□□ 0.28
PCOLCE2-206ENST00000483454 NFATC2IPQ8NCF5 419 aa16.83■□□□□ 0.28
PCOLCE2-206ENST00000483454 PCGF6Q9BYE7 350 aa16.83■□□□□ 0.28
PCOLCE2-206ENST00000483454 USP42Q9H9J4 1324 aaKnown RBP16.83■□□□□ 0.28
PCOLCE2-206ENST00000483454 MRC1P22897 1456 aa16.82■□□□□ 0.28
PCOLCE2-206ENST00000483454 TOMM70O94826 608 aa16.82■□□□□ 0.28
PCOLCE2-206ENST00000483454 APLP1P51693 650 aa16.81■□□□□ 0.28
PCOLCE2-206ENST00000483454 PIM2Q9P1W9 311 aa16.81■□□□□ 0.28
PCOLCE2-206ENST00000483454 SRP68Q9UHB9 627 aaKnown RBP16.81■□□□□ 0.28
PCOLCE2-206ENST00000483454 TIAM2Q8IVF5 1701 aa16.81■□□□□ 0.28
PCOLCE2-206ENST00000483454 DICER1Q9UPY3 1922 aaKnown RBP16.8■□□□□ 0.28
PCOLCE2-206ENST00000483454 CACNA1SQ13698 1873 aa16.8■□□□□ 0.28
PCOLCE2-206ENST00000483454 KCNA3P22001 575 aa16.8■□□□□ 0.28
PCOLCE2-206ENST00000483454 FKBP8Q14318 412 aa16.8■□□□□ 0.28
PCOLCE2-206ENST00000483454 KNSTRNQ9Y448 316 aa16.8■□□□□ 0.28
PCOLCE2-206ENST00000483454 SIPA1L3O60292 1781 aaPredicted RBP16.79■□□□□ 0.28
PCOLCE2-206ENST00000483454 IL13P35225 146 aa16.79■□□□□ 0.28
PCOLCE2-206ENST00000483454 DDR1Q08345 913 aa16.79■□□□□ 0.28
PCOLCE2-206ENST00000483454 NMRK2Q9NPI5 230 aa16.79■□□□□ 0.28
PCOLCE2-206ENST00000483454 DALRD3Q5D0E6 543 aaKnown RBP16.78■□□□□ 0.28
PCOLCE2-206ENST00000483454 AKAP4Q5JQC9 854 aa16.78■□□□□ 0.28
PCOLCE2-206ENST00000483454 C9orf131Q5VYM1 1079 aa16.78■□□□□ 0.28
PCOLCE2-206ENST00000483454 KCPQ6ZWJ8 1503 aa16.78■□□□□ 0.28
PCOLCE2-206ENST00000483454 INTS5Q6P9B9 1019 aaKnown RBP16.77■□□□□ 0.28
PCOLCE2-206ENST00000483454 ANKRD31Q8N7Z5 1873 aa16.77■□□□□ 0.27
PCOLCE2-206ENST00000483454 POLRMTO00411 1230 aaKnown RBP16.76■□□□□ 0.27
PCOLCE2-206ENST00000483454 ZPR1O75312 459 aa16.76■□□□□ 0.27
PCOLCE2-206ENST00000483454 DNAJC10Q8IXB1 793 aa16.76■□□□□ 0.27
PCOLCE2-206ENST00000483454 C16orf71Q8IYS4 520 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms