RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 RIPK4P57078 832 aa13.78□□□□□ -0.2
EWSR1-217ENST00000483415 BTG4Q9NY30 223 aa13.77□□□□□ -0.2
EWSR1-217ENST00000483415 RRP1P56182 461 aaKnown RBP13.77□□□□□ -0.21
EWSR1-217ENST00000483415 AEBP1Q8IUX7 1158 aa13.77□□□□□ -0.21
EWSR1-217ENST00000483415 FRAT2O75474 233 aaPredicted RBP13.77□□□□□ -0.21
EWSR1-217ENST00000483415 BRPF1P55201 1214 aaPredicted RBP13.77□□□□□ -0.21
EWSR1-217ENST00000483415 MTHFSDQ2M296 383 aaKnown RBP13.77□□□□□ -0.21
EWSR1-217ENST00000483415 PHACTR3Q96KR7 559 aa13.77□□□□□ -0.21
EWSR1-217ENST00000483415 CFAP44Q96MT7 982 aa13.76□□□□□ -0.21
EWSR1-217ENST00000483415 IBTKQ9P2D0 1353 aaPredicted RBP13.76□□□□□ -0.21
EWSR1-217ENST00000483415 HMOX1P09601 288 aa13.76□□□□□ -0.21
EWSR1-217ENST00000483415 HOXB7P09629 217 aa13.76□□□□□ -0.21
EWSR1-217ENST00000483415 EVA1CP58658 441 aa13.76□□□□□ -0.21
EWSR1-217ENST00000483415 IFNL2Q8IZJ0 200 aa13.76□□□□□ -0.21
EWSR1-217ENST00000483415 SLC4A3P48751 1232 aa13.75□□□□□ -0.21
EWSR1-217ENST00000483415 CNGB1Q14028 1251 aaPredicted RBP13.75□□□□□ -0.21
EWSR1-217ENST00000483415 TOM1L2Q6ZVM7 507 aa13.75□□□□□ -0.21
EWSR1-217ENST00000483415 CCDC146Q8IYE0 955 aa13.75□□□□□ -0.21
EWSR1-217ENST00000483415 KDM6AO15550 1401 aaPredicted RBP13.75□□□□□ -0.21
EWSR1-217ENST00000483415 CSB-PGBD3P0DP91 1061 aa13.75□□□□□ -0.21
EWSR1-217ENST00000483415 CHRNA2Q15822 529 aa13.75□□□□□ -0.21
EWSR1-217ENST00000483415 DUSP27Q5VZP5 1158 aa13.75□□□□□ -0.21
EWSR1-217ENST00000483415 DCAF5Q96JK2 942 aa13.75□□□□□ -0.21
EWSR1-217ENST00000483415 LY75O60449 1722 aa13.74□□□□□ -0.21
EWSR1-217ENST00000483415 ERVV-2B6SEH9 535 aa13.74□□□□□ -0.21
EWSR1-217ENST00000483415 SOX12O15370 315 aa13.74□□□□□ -0.21
EWSR1-217ENST00000483415 NLRP2Q9NX02 1062 aa13.74□□□□□ -0.21
EWSR1-217ENST00000483415 PHKG2P15735 406 aa13.74□□□□□ -0.21
EWSR1-217ENST00000483415 HEG1Q9ULI3 1381 aa13.74□□□□□ -0.21
EWSR1-217ENST00000483415 CHL1O00533 1208 aa13.73□□□□□ -0.21
EWSR1-217ENST00000483415 HSP90AA2PQ14568 343 aaPredicted RBP13.73□□□□□ -0.21
EWSR1-217ENST00000483415 C1orf141Q5JVX7 400 aa13.73□□□□□ -0.21
EWSR1-217ENST00000483415 LARP1Q6PKG0 1096 aaKnown RBP13.73□□□□□ -0.21
EWSR1-217ENST00000483415 RTF1Q92541 710 aaKnown RBP13.73□□□□□ -0.21
EWSR1-217ENST00000483415 ZCRB1Q8TBF4 217 aaKnown RBP13.73□□□□□ -0.21
EWSR1-217ENST00000483415 TRPC5Q9UL62 973 aaPredicted RBP13.73□□□□□ -0.21
EWSR1-217ENST00000483415 C5P01031 1676 aa13.73□□□□□ -0.21
EWSR1-217ENST00000483415 HMGB2P26583 209 aaKnown RBP13.72□□□□□ -0.21
EWSR1-217ENST00000483415 ZNF772Q68DY9 489 aaPredicted RBP13.72□□□□□ -0.21
EWSR1-217ENST00000483415 BRWD3Q6RI45 1802 aa13.72□□□□□ -0.21
EWSR1-217ENST00000483415 COL5A3P25940 1745 aaPredicted RBP13.72□□□□□ -0.21
EWSR1-217ENST00000483415 RNMTO43148 476 aaKnown RBP13.71□□□□□ -0.21
EWSR1-217ENST00000483415 ALDH1L2Q3SY69 923 aa13.71□□□□□ -0.22
EWSR1-217ENST00000483415 KCPQ6ZWJ8 1503 aa13.7□□□□□ -0.22
EWSR1-217ENST00000483415 ZNF530Q6P9A1 599 aaPredicted RBP13.7□□□□□ -0.22
EWSR1-217ENST00000483415 TJP1Q07157 1748 aa13.7□□□□□ -0.22
EWSR1-217ENST00000483415 LTV1Q96GA3 475 aaPredicted RBP13.7□□□□□ -0.22
EWSR1-217ENST00000483415 TAF7Q15545 349 aaPredicted RBP13.69□□□□□ -0.22
EWSR1-217ENST00000483415 DAXXQ9UER7 740 aaPredicted RBP13.68□□□□□ -0.22
EWSR1-217ENST00000483415 USP21Q9UK80 565 aa13.68□□□□□ -0.22
EWSR1-217ENST00000483415 AFF2P51816 1311 aa13.68□□□□□ -0.22
EWSR1-217ENST00000483415 SKAP1Q86WV1 359 aa13.68□□□□□ -0.22
EWSR1-217ENST00000483415 QSER1Q2KHR3 1735 aa13.68□□□□□ -0.22
EWSR1-217ENST00000483415 PXDNLA1KZ92 1463 aa13.68□□□□□ -0.22
EWSR1-217ENST00000483415 CLCN1P35523 988 aa13.68□□□□□ -0.22
EWSR1-217ENST00000483415 NGLY1Q96IV0 654 aa13.68□□□□□ -0.22
EWSR1-217ENST00000483415 HSP90AA1P07900 732 aaKnown RBP13.67□□□□□ -0.22
EWSR1-217ENST00000483415 BTAF1O14981 1849 aa13.67□□□□□ -0.22
EWSR1-217ENST00000483415 IL17REQ8NFR9 667 aa13.67□□□□□ -0.22
EWSR1-217ENST00000483415 SLC52A2Q9HAB3 445 aa13.67□□□□□ -0.22
EWSR1-217ENST00000483415 ERBB4Q15303 1308 aa13.67□□□□□ -0.22
EWSR1-217ENST00000483415 GJD4Q96KN9 370 aaPredicted RBP13.66□□□□□ -0.22
EWSR1-217ENST00000483415 RGS12O14924 1447 aa13.66□□□□□ -0.22
EWSR1-217ENST00000483415 ZBTB7CA1YPR0 619 aa13.66□□□□□ -0.22
EWSR1-217ENST00000483415 CYP27B1O15528 508 aa13.66□□□□□ -0.22
EWSR1-217ENST00000483415 MEX3CQ5U5Q3 659 aaKnown RBP13.66□□□□□ -0.22
EWSR1-217ENST00000483415 USHBP1Q8N6Y0 703 aa13.66□□□□□ -0.22
EWSR1-217ENST00000483415 AAMPQ13685 434 aa13.66□□□□□ -0.22
EWSR1-217ENST00000483415 TNS1Q9HBL0 1735 aaKnown RBP13.65□□□□□ -0.22
EWSR1-217ENST00000483415 EXOC5O00471 708 aa13.65□□□□□ -0.22
EWSR1-217ENST00000483415 ADAMTS2O95450 1211 aa13.65□□□□□ -0.22
EWSR1-217ENST00000483415 STRN4Q9NRL3 753 aa13.65□□□□□ -0.22
EWSR1-217ENST00000483415 TAF1LQ8IZX4 1826 aa13.65□□□□□ -0.22
EWSR1-217ENST00000483415 RCAN3Q9UKA8 241 aa13.64□□□□□ -0.23
EWSR1-217ENST00000483415 NUTM2BA6NNL0 878 aaPredicted RBP13.64□□□□□ -0.23
EWSR1-217ENST00000483415 NUTM2EB1AL46 878 aaPredicted RBP13.64□□□□□ -0.23
EWSR1-217ENST00000483415 NUTM2AQ8IVF1 878 aaPredicted RBP13.64□□□□□ -0.23
EWSR1-217ENST00000483415 C8orf34Q49A92 452 aa13.64□□□□□ -0.23
EWSR1-217ENST00000483415 ARHGAP45Q92619 1136 aa13.64□□□□□ -0.23
EWSR1-217ENST00000483415 C8orf37Q96NL8 207 aa13.64□□□□□ -0.23
EWSR1-217ENST00000483415 NAP1L5Q96NT1 182 aaPredicted RBP13.64□□□□□ -0.23
EWSR1-217ENST00000483415 NUP188Q5SRE5 1749 aa13.63□□□□□ -0.23
EWSR1-217ENST00000483415 MBIPQ9NS73 344 aa13.63□□□□□ -0.23
EWSR1-217ENST00000483415 DDB1Q16531 1140 aa13.62□□□□□ -0.23
EWSR1-217ENST00000483415 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.62□□□□□ -0.23
EWSR1-217ENST00000483415 KDM2BQ8NHM5 1336 aa13.62□□□□□ -0.23
EWSR1-217ENST00000483415 L1TD1Q5T7N2 865 aaKnown RBP13.62□□□□□ -0.23
EWSR1-217ENST00000483415 RGL2O15211 777 aa13.62□□□□□ -0.23
EWSR1-217ENST00000483415 RBM6P78332 1123 aaKnown RBP13.62□□□□□ -0.23
EWSR1-217ENST00000483415 RRP7AQ9Y3A4 280 aaKnown RBP13.62□□□□□ -0.23
EWSR1-217ENST00000483415 BCORQ6W2J9 1755 aa13.61□□□□□ -0.23
EWSR1-217ENST00000483415 SENP3-EIF4A1A0A087X0R7 540 aa13.61□□□□□ -0.23
EWSR1-217ENST00000483415 TEFQ10587 303 aa13.61□□□□□ -0.23
EWSR1-217ENST00000483415 ANKRD36CQ5JPF3 1778 aa13.61□□□□□ -0.23
EWSR1-217ENST00000483415 KIF16BQ96L93 1317 aa13.61□□□□□ -0.23
EWSR1-217ENST00000483415 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
EWSR1-217ENST00000483415 CDCA7LQ96GN5 454 aa13.6□□□□□ -0.23
EWSR1-217ENST00000483415 TEX13AQ9BXU3 409 aaPredicted RBP13.6□□□□□ -0.23
EWSR1-217ENST00000483415 PRDM4Q9UKN5 801 aa13.6□□□□□ -0.23
EWSR1-217ENST00000483415 EIF4A1P60842 406 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms