RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 USP35Q9P2H5 1018 aa8.48□□□□□ -1.05
CSDE1-207ENST00000483407 ALS2Q96Q42 1657 aa8.48□□□□□ -1.05
CSDE1-207ENST00000483407 NRAPQ86VF7 1730 aa8.48□□□□□ -1.05
CSDE1-207ENST00000483407 POLR3AO14802 1390 aaPredicted RBP8.48□□□□□ -1.05
CSDE1-207ENST00000483407 DISP2A7MBM2 1401 aa8.47□□□□□ -1.05
CSDE1-207ENST00000483407 MAP3K7O43318 606 aa8.47□□□□□ -1.05
CSDE1-207ENST00000483407 TRIM37O94972 964 aa8.47□□□□□ -1.05
CSDE1-207ENST00000483407 PDE3BQ13370 1112 aa8.47□□□□□ -1.05
CSDE1-207ENST00000483407 R3HDM1Q15032 1099 aaKnown RBP8.47□□□□□ -1.05
CSDE1-207ENST00000483407 TYW1BQ6NUM6 668 aa8.47□□□□□ -1.05
CSDE1-207ENST00000483407 APBA3O96018 575 aa8.46□□□□□ -1.06
CSDE1-207ENST00000483407 SRPK2P78362 688 aaKnown RBP8.46□□□□□ -1.06
CSDE1-207ENST00000483407 EZH2Q15910 746 aaKnown RBP8.46□□□□□ -1.06
CSDE1-207ENST00000483407 NLRP13Q86W25 1043 aa8.46□□□□□ -1.06
CSDE1-207ENST00000483407 TCP11L2Q8N4U5 519 aa8.46□□□□□ -1.06
CSDE1-207ENST00000483407 FBXW7Q969H0 707 aa8.46□□□□□ -1.06
CSDE1-207ENST00000483407 PARD3Q8TEW0 1356 aa8.46□□□□□ -1.06
CSDE1-207ENST00000483407 SSH2Q76I76 1423 aa8.46□□□□□ -1.06
CSDE1-207ENST00000483407 LRP5O75197 1615 aa8.45□□□□□ -1.06
CSDE1-207ENST00000483407 CAMKK2Q96RR4 588 aa8.45□□□□□ -1.06
CSDE1-207ENST00000483407 THRAP3Q9Y2W1 955 aaKnown RBP8.45□□□□□ -1.06
CSDE1-207ENST00000483407 THSD7AQ9UPZ6 1657 aa8.45□□□□□ -1.06
CSDE1-207ENST00000483407 CPDO75976 1380 aa8.45□□□□□ -1.06
CSDE1-207ENST00000483407 C11orf95C9JLR9 678 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-207ENST00000483407 GCP02774 474 aa8.44□□□□□ -1.06
CSDE1-207ENST00000483407 TTLL12Q14166 644 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-207ENST00000483407 TSR1Q2NL82 804 aaKnown RBP8.44□□□□□ -1.06
CSDE1-207ENST00000483407 NBPF14Q5TI25 921 aa8.44□□□□□ -1.06
CSDE1-207ENST00000483407 LARP1Q6PKG0 1096 aaKnown RBP8.44□□□□□ -1.06
CSDE1-207ENST00000483407 GOPCQ9HD26 462 aa8.44□□□□□ -1.06
CSDE1-207ENST00000483407 USP19O94966 1318 aa8.44□□□□□ -1.06
CSDE1-207ENST00000483407 CENPJQ9HC77 1338 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-207ENST00000483407 BRD4O60885 1362 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-207ENST00000483407 RGPD1P0DJD0 1748 aa8.43□□□□□ -1.06
CSDE1-207ENST00000483407 ITSN1Q15811 1721 aa8.43□□□□□ -1.06
CSDE1-207ENST00000483407 ARHGEF28Q8N1W1 1705 aaKnown RBP8.43□□□□□ -1.06
CSDE1-207ENST00000483407 HOXB1P14653 301 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-207ENST00000483407 FOSBP53539 338 aa8.43□□□□□ -1.06
CSDE1-207ENST00000483407 NBPF1Q3BBV0 1214 aa8.43□□□□□ -1.06
CSDE1-207ENST00000483407 GIGYF2Q6Y7W6 1299 aaKnown RBP8.43□□□□□ -1.06
CSDE1-207ENST00000483407 TMUB1Q9BVT8 246 aa8.43□□□□□ -1.06
CSDE1-207ENST00000483407 PPIP5K1Q6PFW1 1433 aa8.43□□□□□ -1.06
CSDE1-207ENST00000483407 ZBTB7CA1YPR0 619 aa8.42□□□□□ -1.06
CSDE1-207ENST00000483407 REPIN1Q9BWE0 567 aaKnown RBP8.42□□□□□ -1.06
CSDE1-207ENST00000483407 CRYBG1Q9Y4K1 1723 aa8.42□□□□□ -1.06
CSDE1-207ENST00000483407 CAMTA1Q9Y6Y1 1673 aa8.41□□□□□ -1.06
CSDE1-207ENST00000483407 PHRF1Q9P1Y6 1649 aaKnown RBP8.41□□□□□ -1.06
CSDE1-207ENST00000483407 ERBB3P21860 1342 aa8.41□□□□□ -1.06
CSDE1-207ENST00000483407 MS4A1P11836 297 aa8.41□□□□□ -1.06
CSDE1-207ENST00000483407 CABP1Q9NZU7 370 aa8.41□□□□□ -1.06
CSDE1-207ENST00000483407 NRKQ7Z2Y5 1582 aa8.4□□□□□ -1.06
CSDE1-207ENST00000483407 CRB1P82279 1406 aa8.4□□□□□ -1.06
CSDE1-207ENST00000483407 EVC2Q86UK5 1308 aa8.4□□□□□ -1.06
CSDE1-207ENST00000483407 CLCN1P35523 988 aa8.4□□□□□ -1.06
CSDE1-207ENST00000483407 DOK7Q18PE1 504 aa8.4□□□□□ -1.06
CSDE1-207ENST00000483407 C6orf132Q5T0Z8 1188 aa8.4□□□□□ -1.06
CSDE1-207ENST00000483407 TOM1L2Q6ZVM7 507 aa8.4□□□□□ -1.06
CSDE1-207ENST00000483407 ZDHHC16Q969W1 377 aa8.4□□□□□ -1.06
CSDE1-207ENST00000483407 COL5A2P05997 1499 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-207ENST00000483407 USP6P35125 1406 aa8.39□□□□□ -1.07
CSDE1-207ENST00000483407 AATKQ6ZMQ8 1374 aa8.39□□□□□ -1.07
CSDE1-207ENST00000483407 HOXB3P14651 431 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-207ENST00000483407 DDB1Q16531 1140 aa8.39□□□□□ -1.07
CSDE1-207ENST00000483407 PHOX2BQ99453 314 aa8.39□□□□□ -1.07
CSDE1-207ENST00000483407 ZSWIM6Q9HCJ5 1215 aa8.39□□□□□ -1.07
CSDE1-207ENST00000483407 GPCPD1Q9NPB8 672 aa8.39□□□□□ -1.07
CSDE1-207ENST00000483407 PPP1R1BQ9UD71 204 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-207ENST00000483407 KIAA1210Q9ULL0 1709 aa8.39□□□□□ -1.07
CSDE1-207ENST00000483407 TOPAZ1Q8N9V7 1692 aa8.39□□□□□ -1.07
CSDE1-207ENST00000483407 OVOS2A0A0G2JMS6 1433 aa8.38□□□□□ -1.07
CSDE1-207ENST00000483407 OVOS2A0A0J9YW53 1432 aa8.38□□□□□ -1.07
CSDE1-207ENST00000483407 OVOS2Q6IE36 1432 aa8.38□□□□□ -1.07
CSDE1-207ENST00000483407 TNS1Q9HBL0 1735 aaKnown RBP8.38□□□□□ -1.07
CSDE1-207ENST00000483407 ZNF710Q8N1W2 664 aa8.38□□□□□ -1.07
CSDE1-207ENST00000483407 KCNH5Q8NCM2 988 aa8.38□□□□□ -1.07
CSDE1-207ENST00000483407 ARXQ96QS3 562 aa8.38□□□□□ -1.07
CSDE1-207ENST00000483407 CDCA7Q9BWT1 371 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-207ENST00000483407 SPON1Q9HCB6 807 aa8.38□□□□□ -1.07
CSDE1-207ENST00000483407 RBM27Q9P2N5 1060 aaKnown RBP8.38□□□□□ -1.07
CSDE1-207ENST00000483407 LMO7Q8WWI1 1683 aa8.37□□□□□ -1.07
CSDE1-207ENST00000483407 WDR17Q8IZU2 1322 aa8.37□□□□□ -1.07
CSDE1-207ENST00000483407 PLSCR1O15162 318 aa8.37□□□□□ -1.07
CSDE1-207ENST00000483407 OATP04181 439 aa8.37□□□□□ -1.07
CSDE1-207ENST00000483407 NUDT7P0C024 238 aa8.37□□□□□ -1.07
CSDE1-207ENST00000483407 CSB-PGBD3P0DP91 1061 aa8.37□□□□□ -1.07
CSDE1-207ENST00000483407 ARSIQ5FYB1 569 aa8.37□□□□□ -1.07
CSDE1-207ENST00000483407 GPR153Q6NV75 609 aa8.37□□□□□ -1.07
CSDE1-207ENST00000483407 ZNF454Q8N9F8 522 aa8.37□□□□□ -1.07
CSDE1-207ENST00000483407 TTC13Q8NBP0 860 aa8.37□□□□□ -1.07
CSDE1-207ENST00000483407 L3MBTL2Q969R5 705 aa8.37□□□□□ -1.07
CSDE1-207ENST00000483407 TTC21BQ7Z4L5 1316 aa8.36□□□□□ -1.07
CSDE1-207ENST00000483407 KCNQ2O43526 872 aa8.36□□□□□ -1.07
CSDE1-207ENST00000483407 METTL3Q86U44 580 aaKnown RBP8.36□□□□□ -1.07
CSDE1-207ENST00000483407 ARHGEF25Q86VW2 580 aa8.36□□□□□ -1.07
CSDE1-207ENST00000483407 ROCK2O75116 1388 aaKnown RBP8.35□□□□□ -1.07
CSDE1-207ENST00000483407 TTC21AQ8NDW8 1320 aa8.35□□□□□ -1.07
CSDE1-207ENST00000483407 SLIT3O75094 1523 aa8.35□□□□□ -1.07
CSDE1-207ENST00000483407 RIMBP2O15034 1052 aa8.35□□□□□ -1.07
CSDE1-207ENST00000483407 MDM2Q00987 491 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-207ENST00000483407 PADI6Q6TGC4 694 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms