RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 TPM4P67936 248 aa9.32□□□□□ -0.92
COL4A5-205ENST00000483338 CEP135Q66GS9 1140 aa9.32□□□□□ -0.92
COL4A5-205ENST00000483338 REXO1L1PQ8IX06 675 aa9.32□□□□□ -0.92
COL4A5-205ENST00000483338 FANCAO15360 1455 aa9.32□□□□□ -0.92
COL4A5-205ENST00000483338 KIF3BO15066 747 aa9.32□□□□□ -0.92
COL4A5-205ENST00000483338 CEP89Q96ST8 783 aa9.32□□□□□ -0.92
COL4A5-205ENST00000483338 RBM28Q9NW13 759 aaKnown RBP9.32□□□□□ -0.92
COL4A5-205ENST00000483338 U2SURPO15042 1029 aaKnown RBP9.31□□□□□ -0.92
COL4A5-205ENST00000483338 JMYQ8N9B5 988 aa9.31□□□□□ -0.92
COL4A5-205ENST00000483338 BCL2L13Q9BXK5 485 aa9.31□□□□□ -0.92
COL4A5-205ENST00000483338 GPS2Q13227 327 aa9.31□□□□□ -0.92
COL4A5-205ENST00000483338 HDAC1Q13547 482 aaPredicted RBP9.31□□□□□ -0.92
COL4A5-205ENST00000483338 TBC1D9Q6ZT07 1266 aa9.31□□□□□ -0.92
COL4A5-205ENST00000483338 TTC36A6NLP5 189 aa9.31□□□□□ -0.92
COL4A5-205ENST00000483338 EIF3CLB5ME19 914 aaKnown RBP9.31□□□□□ -0.92
COL4A5-205ENST00000483338 SMARCA5O60264 1052 aaPredicted RBP9.31□□□□□ -0.92
COL4A5-205ENST00000483338 MMS22LQ6ZRQ5 1243 aa9.31□□□□□ -0.92
COL4A5-205ENST00000483338 IQUBQ8NA54 791 aa9.31□□□□□ -0.92
COL4A5-205ENST00000483338 EIF3CQ99613 913 aaKnown RBP9.31□□□□□ -0.92
COL4A5-205ENST00000483338 TCHHQ07283 1943 aa9.3□□□□□ -0.92
COL4A5-205ENST00000483338 KLHL33A6NCF5 533 aa9.3□□□□□ -0.92
COL4A5-205ENST00000483338 PPP2R1AP30153 589 aa9.3□□□□□ -0.92
COL4A5-205ENST00000483338 PKD2Q13563 968 aa9.3□□□□□ -0.92
COL4A5-205ENST00000483338 MVPQ14764 893 aaKnown RBP9.3□□□□□ -0.92
COL4A5-205ENST00000483338 UBXN6Q9BZV1 441 aa9.3□□□□□ -0.92
COL4A5-205ENST00000483338 CCDC196A0A1B0GTZ2 297 aa9.3□□□□□ -0.92
COL4A5-205ENST00000483338 ZRANB2O95218 330 aaKnown RBP eCLIP9.3□□□□□ -0.92
COL4A5-205ENST00000483338 RABEP1Q15276 862 aa9.3□□□□□ -0.92
COL4A5-205ENST00000483338 TPD52L1Q16890 204 aaPredicted RBP9.3□□□□□ -0.92
COL4A5-205ENST00000483338 BMP2KLQ5H9B9 411 aa9.3□□□□□ -0.92
COL4A5-205ENST00000483338 TRDNQ13061 729 aa9.3□□□□□ -0.92
COL4A5-205ENST00000483338 PPM1EQ8WY54 764 aa9.3□□□□□ -0.92
COL4A5-205ENST00000483338 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.3□□□□□ -0.92
COL4A5-205ENST00000483338 KANK1Q14678 1352 aa9.3□□□□□ -0.92
COL4A5-205ENST00000483338 ADGRL1O94910 1474 aa9.29□□□□□ -0.92
COL4A5-205ENST00000483338 HTATSF1O43719 755 aaKnown RBP9.29□□□□□ -0.92
COL4A5-205ENST00000483338 SCP2P22307 547 aa9.29□□□□□ -0.92
COL4A5-205ENST00000483338 ZKSCAN8Q15776 578 aaPredicted RBP9.29□□□□□ -0.92
COL4A5-205ENST00000483338 ZNF526Q8TF50 670 aaPredicted RBP9.29□□□□□ -0.92
COL4A5-205ENST00000483338 USP26Q9BXU7 913 aa9.29□□□□□ -0.92
COL4A5-205ENST00000483338 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.29□□□□□ -0.92
COL4A5-205ENST00000483338 ERCC6LQ2NKX8 1250 aa9.29□□□□□ -0.92
COL4A5-205ENST00000483338 CCDC186Q7Z3E2 898 aa9.29□□□□□ -0.92
COL4A5-205ENST00000483338 LNPKQ9C0E8 428 aa9.29□□□□□ -0.92
COL4A5-205ENST00000483338 GDPD2Q9HCC8 539 aa9.29□□□□□ -0.92
COL4A5-205ENST00000483338 SSR1P43307 286 aaKnown RBP9.29□□□□□ -0.92
COL4A5-205ENST00000483338 NBPF6Q5VWK0 638 aa9.29□□□□□ -0.92
COL4A5-205ENST00000483338 NBPF5PQ86XG9 351 aaPredicted RBP9.29□□□□□ -0.92
COL4A5-205ENST00000483338 NBPF4Q96M43 638 aa9.29□□□□□ -0.92
COL4A5-205ENST00000483338 TCOF1Q13428 1488 aaKnown RBP9.28□□□□□ -0.92
COL4A5-205ENST00000483338 ABCC10Q5T3U5 1492 aa9.28□□□□□ -0.92
COL4A5-205ENST00000483338 ZSCAN16Q9H4T2 348 aaPredicted RBP9.28□□□□□ -0.92
COL4A5-205ENST00000483338 BSDC1Q9NW68 430 aaPredicted RBP9.28□□□□□ -0.92
COL4A5-205ENST00000483338 KDM5DQ9BY66 1539 aa9.28□□□□□ -0.92
COL4A5-205ENST00000483338 SLU7O95391 586 aaKnown RBP9.28□□□□□ -0.92
COL4A5-205ENST00000483338 ACTN2P35609 894 aa9.28□□□□□ -0.92
COL4A5-205ENST00000483338 NUCB1Q02818 461 aa9.28□□□□□ -0.92
COL4A5-205ENST00000483338 NEUROD2Q15784 382 aa9.28□□□□□ -0.92
COL4A5-205ENST00000483338 FOXR1Q6PIV2 292 aa9.28□□□□□ -0.92
COL4A5-205ENST00000483338 CFAP44Q96MT7 982 aa9.28□□□□□ -0.92
COL4A5-205ENST00000483338 TERF2IPQ9NYB0 399 aa9.28□□□□□ -0.92
COL4A5-205ENST00000483338 NRBP1Q9UHY1 535 aa9.28□□□□□ -0.92
COL4A5-205ENST00000483338 LRRIQ1Q96JM4 1722 aa9.28□□□□□ -0.92
COL4A5-205ENST00000483338 KIF3CO14782 793 aa9.27□□□□□ -0.92
COL4A5-205ENST00000483338 OAS2P29728 719 aaKnown RBP9.27□□□□□ -0.92
COL4A5-205ENST00000483338 ZC3H12AQ5D1E8 599 aaKnown RBP9.27□□□□□ -0.92
COL4A5-205ENST00000483338 CCDC183Q5T5S1 534 aa9.27□□□□□ -0.92
COL4A5-205ENST00000483338 ZSCAN25Q6NSZ9 544 aa9.27□□□□□ -0.92
COL4A5-205ENST00000483338 CFAP74Q9C0B2 1584 aa9.27□□□□□ -0.92
COL4A5-205ENST00000483338 USP27XA6NNY8 438 aa9.27□□□□□ -0.93
COL4A5-205ENST00000483338 RNF20Q5VTR2 975 aa9.27□□□□□ -0.93
COL4A5-205ENST00000483338 LRRN4CLQ8ND94 238 aa9.27□□□□□ -0.93
COL4A5-205ENST00000483338 ITFG2Q969R8 447 aa9.27□□□□□ -0.93
COL4A5-205ENST00000483338 FUCA2Q9BTY2 467 aa9.27□□□□□ -0.93
COL4A5-205ENST00000483338 KNSTRNQ9Y448 316 aa9.27□□□□□ -0.93
COL4A5-205ENST00000483338 BRD1O95696 1058 aa9.27□□□□□ -0.93
COL4A5-205ENST00000483338 CPP00450 1065 aa9.27□□□□□ -0.93
COL4A5-205ENST00000483338 LMAN1P49257 510 aa9.27□□□□□ -0.93
COL4A5-205ENST00000483338 CORO7P57737 925 aa9.27□□□□□ -0.93
COL4A5-205ENST00000483338 TTC19Q6DKK2 380 aaPredicted RBP9.27□□□□□ -0.93
COL4A5-205ENST00000483338 OTUD6BQ8N6M0 293 aa9.27□□□□□ -0.93
COL4A5-205ENST00000483338 TBC1D22AQ8WUA7 517 aa9.27□□□□□ -0.93
COL4A5-205ENST00000483338 ZNF428Q96B54 188 aa9.27□□□□□ -0.93
COL4A5-205ENST00000483338 ABCC5O15440 1437 aa9.26□□□□□ -0.93
COL4A5-205ENST00000483338 ANKRD65E5RJM6 399 aa9.26□□□□□ -0.93
COL4A5-205ENST00000483338 USP48Q86UV5 1035 aa9.26□□□□□ -0.93
COL4A5-205ENST00000483338 FAXDC2Q96IV6 333 aa9.26□□□□□ -0.93
COL4A5-205ENST00000483338 DAPK1P53355 1430 aa9.26□□□□□ -0.93
COL4A5-205ENST00000483338 TRAPPC8Q9Y2L5 1435 aa9.26□□□□□ -0.93
COL4A5-205ENST00000483338 MPHOSPH10O00566 681 aaKnown RBP9.26□□□□□ -0.93
COL4A5-205ENST00000483338 NYAP1Q6ZVC0 841 aa9.26□□□□□ -0.93
COL4A5-205ENST00000483338 AK7Q96M32 723 aa9.26□□□□□ -0.93
COL4A5-205ENST00000483338 PSD3Q9NYI0 1048 aa9.26□□□□□ -0.93
COL4A5-205ENST00000483338 PZPP20742 1482 aa9.26□□□□□ -0.93
COL4A5-205ENST00000483338 CHGAP10645 457 aaKnown RBP9.26□□□□□ -0.93
COL4A5-205ENST00000483338 FOXD4L6Q3SYB3 417 aaPredicted RBP9.26□□□□□ -0.93
COL4A5-205ENST00000483338 FOXD4L3Q6VB84 417 aaPredicted RBP9.26□□□□□ -0.93
COL4A5-205ENST00000483338 EXOC4Q96A65 974 aa9.26□□□□□ -0.93
COL4A5-205ENST00000483338 ADAM21Q9UKJ8 722 aa9.26□□□□□ -0.93
COL4A5-205ENST00000483338 C9orf84Q5VXU9 1444 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms