RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 OTUD5Q96G74 571 aa17.62■□□□□ 0.41
COL21A1-209ENST00000482933 TRIM35Q9UPQ4 493 aa17.62■□□□□ 0.41
COL21A1-209ENST00000482933 EMILIN1Q9Y6C2 1016 aa17.62■□□□□ 0.41
COL21A1-209ENST00000482933 MEGF6O75095 1541 aa17.62■□□□□ 0.41
COL21A1-209ENST00000482933 BTAF1O14981 1849 aa17.61■□□□□ 0.41
COL21A1-209ENST00000482933 TATP17735 454 aaPredicted RBP17.61■□□□□ 0.41
COL21A1-209ENST00000482933 MAMSTRQ6ZN01 415 aa17.61■□□□□ 0.41
COL21A1-209ENST00000482933 USHBP1Q8N6Y0 703 aa17.61■□□□□ 0.41
COL21A1-209ENST00000482933 PPM1GO15355 546 aaPredicted RBP17.6■□□□□ 0.41
COL21A1-209ENST00000482933 SLC15A2Q16348 729 aa17.6■□□□□ 0.41
COL21A1-209ENST00000482933 SYTL4Q96C24 671 aaPredicted RBP17.59■□□□□ 0.41
COL21A1-209ENST00000482933 TMEM106CQ9BVX2 250 aa17.59■□□□□ 0.41
COL21A1-209ENST00000482933 MAP2P11137 1827 aaKnown RBP17.58■□□□□ 0.41
COL21A1-209ENST00000482933 PANK3Q9H999 370 aa17.58■□□□□ 0.41
COL21A1-209ENST00000482933 WASHC2AQ641Q2 1341 aa17.58■□□□□ 0.4
COL21A1-209ENST00000482933 SHANK3Q9BYB0 1731 aa17.58■□□□□ 0.4
COL21A1-209ENST00000482933 CHRM1P11229 460 aaPredicted RBP17.57■□□□□ 0.4
COL21A1-209ENST00000482933 PRIM1P49642 420 aaKnown RBP17.57■□□□□ 0.4
COL21A1-209ENST00000482933 PPP1R1BQ9UD71 204 aaPredicted RBP17.57■□□□□ 0.4
COL21A1-209ENST00000482933 ANKRD26Q9UPS8 1709 aa17.56■□□□□ 0.4
COL21A1-209ENST00000482933 PCDH11XQ9BZA7 1347 aa17.56■□□□□ 0.4
COL21A1-209ENST00000482933 PCDH11YQ9BZA8 1340 aa17.56■□□□□ 0.4
COL21A1-209ENST00000482933 ZNF467Q7Z7K2 595 aaPredicted RBP17.56■□□□□ 0.4
COL21A1-209ENST00000482933 POLKQ9UBT6 870 aa17.56■□□□□ 0.4
COL21A1-209ENST00000482933 CASZ1Q86V15 1759 aa17.56■□□□□ 0.4
COL21A1-209ENST00000482933 SLC27A3Q5K4L6 730 aa17.55■□□□□ 0.4
COL21A1-209ENST00000482933 DOT1LQ8TEK3 1739 aa17.55■□□□□ 0.4
COL21A1-209ENST00000482933 NSD2O96028 1365 aa17.55■□□□□ 0.4
COL21A1-209ENST00000482933 SEC24BO95487 1268 aa17.54■□□□□ 0.4
COL21A1-209ENST00000482933 TNNT2P45379 298 aaPredicted RBP17.53■□□□□ 0.4
COL21A1-209ENST00000482933 NCAPD2Q15021 1401 aa17.52■□□□□ 0.4
COL21A1-209ENST00000482933 PAPPAQ13219 1627 aa17.52■□□□□ 0.4
COL21A1-209ENST00000482933 ZBTB7AO95365 584 aa17.52■□□□□ 0.4
COL21A1-209ENST00000482933 EYA1Q99502 592 aa17.52■□□□□ 0.4
COL21A1-209ENST00000482933 PDGFDQ9GZP0 370 aaPredicted RBP17.52■□□□□ 0.4
COL21A1-209ENST00000482933 LRRC4BQ9NT99 713 aa17.52■□□□□ 0.4
COL21A1-209ENST00000482933 POTEFA5A3E0 1075 aa17.51■□□□□ 0.39
COL21A1-209ENST00000482933 SPG7Q9UQ90 795 aa17.51■□□□□ 0.39
COL21A1-209ENST00000482933 KNSTRNQ9Y448 316 aa17.51■□□□□ 0.39
COL21A1-209ENST00000482933 MTFR1LQ9H019 292 aa17.5■□□□□ 0.39
COL21A1-209ENST00000482933 PCDHB8Q9UN66 801 aa17.5■□□□□ 0.39
COL21A1-209ENST00000482933 CYP27B1O15528 508 aa17.49■□□□□ 0.39
COL21A1-209ENST00000482933 HMGB2P26583 209 aaKnown RBP17.49■□□□□ 0.39
COL21A1-209ENST00000482933 ZNF827Q17R98 1081 aa17.49■□□□□ 0.39
COL21A1-209ENST00000482933 MORC1Q86VD1 984 aa17.49■□□□□ 0.39
COL21A1-209ENST00000482933 SCUBE2Q9NQ36 999 aa17.49■□□□□ 0.39
COL21A1-209ENST00000482933 LY75O60449 1722 aa17.49■□□□□ 0.39
COL21A1-209ENST00000482933 PKD1L3Q7Z443 1732 aa17.49■□□□□ 0.39
COL21A1-209ENST00000482933 EIF4A2Q14240 407 aaKnown RBP17.48■□□□□ 0.39
COL21A1-209ENST00000482933 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.48■□□□□ 0.39
COL21A1-209ENST00000482933 CCNL1Q9UK58 526 aaPredicted RBP17.48■□□□□ 0.39
COL21A1-209ENST00000482933 KIF7Q2M1P5 1343 aa17.47■□□□□ 0.39
COL21A1-209ENST00000482933 POTEJP0CG39 1038 aa17.47■□□□□ 0.39
COL21A1-209ENST00000482933 PTGER2P43116 358 aa17.47■□□□□ 0.39
COL21A1-209ENST00000482933 NKX1-1Q15270 411 aaPredicted RBP17.47■□□□□ 0.39
COL21A1-209ENST00000482933 MPRIPQ6WCQ1 1025 aa17.47■□□□□ 0.39
COL21A1-209ENST00000482933 CIZ1Q9ULV3 898 aaPredicted RBP17.47■□□□□ 0.39
COL21A1-209ENST00000482933 TFCP2L1Q9NZI6 479 aa17.46■□□□□ 0.39
COL21A1-209ENST00000482933 PLEKHG2Q9H7P9 1386 aa17.46■□□□□ 0.39
COL21A1-209ENST00000482933 IFNL2Q8IZJ0 200 aa17.45■□□□□ 0.38
COL21A1-209ENST00000482933 SLC16A10Q8TF71 515 aa17.45■□□□□ 0.38
COL21A1-209ENST00000482933 COLQQ9Y215 455 aaPredicted RBP17.45■□□□□ 0.38
COL21A1-209ENST00000482933 QSER1Q2KHR3 1735 aa17.45■□□□□ 0.38
COL21A1-209ENST00000482933 KCNQ4P56696 695 aa17.44■□□□□ 0.38
COL21A1-209ENST00000482933 SMARCC1Q92922 1105 aaPredicted RBP17.44■□□□□ 0.38
COL21A1-209ENST00000482933 IGSF1Q8N6C5 1336 aa17.43■□□□□ 0.38
COL21A1-209ENST00000482933 PALLDQ8WX93 1383 aa17.42■□□□□ 0.38
COL21A1-209ENST00000482933 AMER1Q5JTC6 1135 aaPredicted RBP17.42■□□□□ 0.38
COL21A1-209ENST00000482933 PNPLA7Q6ZV29 1317 aa17.42■□□□□ 0.38
COL21A1-209ENST00000482933 ITGB4P16144 1822 aa17.42■□□□□ 0.38
COL21A1-209ENST00000482933 TOGARAM1Q9Y4F4 1720 aa17.41■□□□□ 0.38
COL21A1-209ENST00000482933 PHKG2P15735 406 aa17.41■□□□□ 0.38
COL21A1-209ENST00000482933 PIGBQ92521 554 aa17.4■□□□□ 0.38
COL21A1-209ENST00000482933 ARXQ96QS3 562 aa17.4■□□□□ 0.38
COL21A1-209ENST00000482933 PLCG2P16885 1265 aa17.39■□□□□ 0.38
COL21A1-209ENST00000482933 POLD1P28340 1107 aa17.39■□□□□ 0.38
COL21A1-209ENST00000482933 PLEKHO1Q53GL0 409 aaPredicted RBP17.39■□□□□ 0.38
COL21A1-209ENST00000482933 TMOD3Q9NYL9 352 aa17.39■□□□□ 0.38
COL21A1-209ENST00000482933 HSP90AB1P08238 724 aaKnown RBP17.38■□□□□ 0.37
COL21A1-209ENST00000482933 AMOTQ4VCS5 1084 aa17.38■□□□□ 0.37
COL21A1-209ENST00000482933 SYT17Q9BSW7 474 aa17.38■□□□□ 0.37
COL21A1-209ENST00000482933 FHDC1Q9C0D6 1143 aaPredicted RBP17.38■□□□□ 0.37
COL21A1-209ENST00000482933 TUBGCP6Q96RT7 1819 aa17.38■□□□□ 0.37
COL21A1-209ENST00000482933 PER1O15534 1290 aaPredicted RBP17.38■□□□□ 0.37
COL21A1-209ENST00000482933 C5P01031 1676 aa17.37■□□□□ 0.37
COL21A1-209ENST00000482933 FLAD1Q8NFF5 587 aa17.36■□□□□ 0.37
COL21A1-209ENST00000482933 TAF1LQ8IZX4 1826 aa17.35■□□□□ 0.37
COL21A1-209ENST00000482933 ERVV-2B6SEH9 535 aa17.35■□□□□ 0.37
COL21A1-209ENST00000482933 IL13P35225 146 aa17.35■□□□□ 0.37
COL21A1-209ENST00000482933 IRX5P78411 483 aaPredicted RBP17.35■□□□□ 0.37
COL21A1-209ENST00000482933 SULT6B1Q6IMI4 303 aa17.35■□□□□ 0.37
COL21A1-209ENST00000482933 COL23A1Q86Y22 540 aaPredicted RBP17.35■□□□□ 0.37
COL21A1-209ENST00000482933 DCAF5Q96JK2 942 aa17.35■□□□□ 0.37
COL21A1-209ENST00000482933 LOC102724428A0A0B4J2F2 783 aa17.34■□□□□ 0.37
COL21A1-209ENST00000482933 MTHFSP49914 203 aa17.34■□□□□ 0.37
COL21A1-209ENST00000482933 SIK1P57059 783 aa17.34■□□□□ 0.37
COL21A1-209ENST00000482933 CC2D1BQ5T0F9 858 aaKnown RBP17.34■□□□□ 0.37
COL21A1-209ENST00000482933 ZNF530Q6P9A1 599 aaPredicted RBP17.34■□□□□ 0.37
COL21A1-209ENST00000482933 AK7Q96M32 723 aa17.34■□□□□ 0.37
COL21A1-209ENST00000482933 MAP3K5Q99683 1374 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms