RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 ZNF662Q6ZS27 426 aa10.44□□□□□ -0.74
TVP23B-203ENST00000482741 PHF8Q9UPP1 1060 aa10.44□□□□□ -0.74
TVP23B-203ENST00000482741 CCDC61Q9Y6R9 512 aa10.43□□□□□ -0.74
TVP23B-203ENST00000482741 RNF123Q5XPI4 1314 aa10.43□□□□□ -0.74
TVP23B-203ENST00000482741 ST20-MTHFSA0A0A6YYL1 179 aa10.43□□□□□ -0.74
TVP23B-203ENST00000482741 SPATA31A3Q5VYP0 1347 aa10.43□□□□□ -0.74
TVP23B-203ENST00000482741 HEG1Q9ULI3 1381 aa10.43□□□□□ -0.74
TVP23B-203ENST00000482741 TAF7LQ5H9L4 462 aa10.43□□□□□ -0.74
TVP23B-203ENST00000482741 TRMT2AQ8IZ69 625 aaKnown RBP10.43□□□□□ -0.74
TVP23B-203ENST00000482741 CARD14Q9BXL6 1004 aa10.43□□□□□ -0.74
TVP23B-203ENST00000482741 CCDC125Q86Z20 511 aa10.41□□□□□ -0.74
TVP23B-203ENST00000482741 ILDR1Q86SU0 546 aaPredicted RBP10.41□□□□□ -0.74
TVP23B-203ENST00000482741 SSUH2Q9Y2M2 353 aa10.41□□□□□ -0.74
TVP23B-203ENST00000482741 BTAF1O14981 1849 aa10.41□□□□□ -0.74
TVP23B-203ENST00000482741 IL16Q14005 1332 aa10.41□□□□□ -0.74
TVP23B-203ENST00000482741 SPATA31A6Q5VVP1 1343 aa10.41□□□□□ -0.74
TVP23B-203ENST00000482741 DDX27Q96GQ7 796 aaKnown RBP10.41□□□□□ -0.74
TVP23B-203ENST00000482741 UBR3Q6ZT12 1888 aa10.4□□□□□ -0.74
TVP23B-203ENST00000482741 PSMD1Q99460 953 aa10.4□□□□□ -0.74
TVP23B-203ENST00000482741 GPR37O15354 613 aa10.4□□□□□ -0.74
TVP23B-203ENST00000482741 FLT4P35916 1363 aa10.39□□□□□ -0.75
TVP23B-203ENST00000482741 CEMIPQ8WUJ3 1361 aa10.39□□□□□ -0.75
TVP23B-203ENST00000482741 CEBPAP49715 358 aaPredicted RBP10.39□□□□□ -0.75
TVP23B-203ENST00000482741 IGSF1Q8N6C5 1336 aa10.38□□□□□ -0.75
TVP23B-203ENST00000482741 NOL8Q76FK4 1167 aaKnown RBP10.38□□□□□ -0.75
TVP23B-203ENST00000482741 PRAM1Q96QH2 718 aa10.38□□□□□ -0.75
TVP23B-203ENST00000482741 IRF6O14896 467 aa10.38□□□□□ -0.75
TVP23B-203ENST00000482741 SCNN1AP37088 669 aa10.38□□□□□ -0.75
TVP23B-203ENST00000482741 CDK19Q9BWU1 502 aa10.38□□□□□ -0.75
TVP23B-203ENST00000482741 PRKRIP1Q9H875 184 aaPredicted RBP10.38□□□□□ -0.75
TVP23B-203ENST00000482741 EFCAB3Q8N7B9 438 aa10.37□□□□□ -0.75
TVP23B-203ENST00000482741 HTATSF1O43719 755 aaKnown RBP10.37□□□□□ -0.75
TVP23B-203ENST00000482741 SND1Q7KZF4 910 aaKnown RBP eCLIP10.37□□□□□ -0.75
TVP23B-203ENST00000482741 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.37□□□□□ -0.75
TVP23B-203ENST00000482741 RIC1Q4ADV7 1423 aa10.37□□□□□ -0.75
TVP23B-203ENST00000482741 BRD1O95696 1058 aa10.36□□□□□ -0.75
TVP23B-203ENST00000482741 ZNF467Q7Z7K2 595 aaPredicted RBP10.36□□□□□ -0.75
TVP23B-203ENST00000482741 TERF2IPQ9NYB0 399 aa10.36□□□□□ -0.75
TVP23B-203ENST00000482741 LTBP1Q14766 1721 aa10.36□□□□□ -0.75
TVP23B-203ENST00000482741 ITGAEP38570 1179 aa10.36□□□□□ -0.75
TVP23B-203ENST00000482741 TAGLNQ01995 201 aaKnown RBP10.36□□□□□ -0.75
TVP23B-203ENST00000482741 NUDT16Q96DE0 195 aaKnown RBP10.36□□□□□ -0.75
TVP23B-203ENST00000482741 TSPYL2Q9H2G4 693 aaPredicted RBP10.36□□□□□ -0.75
TVP23B-203ENST00000482741 CSPP1Q1MSJ5 1256 aa10.36□□□□□ -0.75
TVP23B-203ENST00000482741 NPHP3Q7Z494 1330 aa10.35□□□□□ -0.75
TVP23B-203ENST00000482741 PLEKHF1Q96S99 279 aa10.35□□□□□ -0.75
TVP23B-203ENST00000482741 TBC1D2BQ9UPU7 963 aa10.35□□□□□ -0.75
TVP23B-203ENST00000482741 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.35□□□□□ -0.75
TVP23B-203ENST00000482741 PSME4Q14997 1843 aa10.35□□□□□ -0.75
TVP23B-203ENST00000482741 C9orf131Q5VYM1 1079 aa10.34□□□□□ -0.75
TVP23B-203ENST00000482741 CABP2Q9NPB3 220 aa10.34□□□□□ -0.75
TVP23B-203ENST00000482741 BRCA1P38398 1863 aaKnown RBP10.34□□□□□ -0.75
TVP23B-203ENST00000482741 COL15A1P39059 1388 aa10.34□□□□□ -0.75
TVP23B-203ENST00000482741 SOCS7O14512 581 aa10.34□□□□□ -0.75
TVP23B-203ENST00000482741 ANKRD62A6NC57 917 aa10.34□□□□□ -0.75
TVP23B-203ENST00000482741 FAM161AQ3B820 660 aa10.34□□□□□ -0.75
TVP23B-203ENST00000482741 MAP3K19Q56UN5 1328 aa10.34□□□□□ -0.75
TVP23B-203ENST00000482741 GIMAP6Q6P9H5 292 aa10.33□□□□□ -0.76
TVP23B-203ENST00000482741 JCADQ9P266 1359 aa10.33□□□□□ -0.76
TVP23B-203ENST00000482741 CRB1P82279 1406 aa10.33□□□□□ -0.76
TVP23B-203ENST00000482741 BCL9LQ86UU0 1499 aa10.33□□□□□ -0.76
TVP23B-203ENST00000482741 GIPC2Q8TF65 315 aa10.33□□□□□ -0.76
TVP23B-203ENST00000482741 FYB1O15117 783 aa10.32□□□□□ -0.76
TVP23B-203ENST00000482741 CSB-PGBD3P0DP91 1061 aa10.32□□□□□ -0.76
TVP23B-203ENST00000482741 NLRP13Q86W25 1043 aa10.32□□□□□ -0.76
TVP23B-203ENST00000482741 CLEC11AQ9Y240 323 aa10.32□□□□□ -0.76
TVP23B-203ENST00000482741 KCNH5Q8NCM2 988 aa10.31□□□□□ -0.76
TVP23B-203ENST00000482741 SPDYE2BA6NHP3 402 aa10.31□□□□□ -0.76
TVP23B-203ENST00000482741 SPDYE6P0CI01 402 aa10.31□□□□□ -0.76
TVP23B-203ENST00000482741 SPDYE2Q495Y8 402 aa10.31□□□□□ -0.76
TVP23B-203ENST00000482741 DNAJC2Q99543 621 aaKnown RBP10.31□□□□□ -0.76
TVP23B-203ENST00000482741 PRDM16Q9HAZ2 1276 aa10.31□□□□□ -0.76
TVP23B-203ENST00000482741 THRAP3Q9Y2W1 955 aaKnown RBP10.31□□□□□ -0.76
TVP23B-203ENST00000482741 MDM2Q00987 491 aaPredicted RBP10.31□□□□□ -0.76
TVP23B-203ENST00000482741 BRINP3Q76B58 766 aa10.31□□□□□ -0.76
TVP23B-203ENST00000482741 MYH3P11055 1940 aa10.3□□□□□ -0.76
TVP23B-203ENST00000482741 MAP2K5Q13163 448 aa10.3□□□□□ -0.76
TVP23B-203ENST00000482741 KIAA0232Q92628 1395 aa10.3□□□□□ -0.76
TVP23B-203ENST00000482741 ACEP12821 1306 aa10.29□□□□□ -0.76
TVP23B-203ENST00000482741 CT47B1P0C2W7 299 aaPredicted RBP10.29□□□□□ -0.76
TVP23B-203ENST00000482741 ADAMTS19Q8TE59 1207 aa10.29□□□□□ -0.76
TVP23B-203ENST00000482741 PNISRQ8TF01 805 aaKnown RBP10.29□□□□□ -0.76
TVP23B-203ENST00000482741 ATP10DQ9P241 1426 aa10.29□□□□□ -0.76
TVP23B-203ENST00000482741 SPEF2Q9C093 1822 aa10.28□□□□□ -0.76
TVP23B-203ENST00000482741 IL13P35225 146 aa10.28□□□□□ -0.76
TVP23B-203ENST00000482741 PSME1Q06323 249 aa10.28□□□□□ -0.76
TVP23B-203ENST00000482741 VTI1AQ96AJ9 217 aa10.28□□□□□ -0.76
TVP23B-203ENST00000482741 MARCH6O60337 910 aa10.27□□□□□ -0.76
TVP23B-203ENST00000482741 AMHR2Q16671 573 aa10.27□□□□□ -0.76
TVP23B-203ENST00000482741 ZNF326Q5BKZ1 582 aaKnown RBP10.27□□□□□ -0.76
TVP23B-203ENST00000482741 ARHGEF25Q86VW2 580 aa10.27□□□□□ -0.76
TVP23B-203ENST00000482741 PRDM10Q9NQV6 1147 aa10.27□□□□□ -0.76
TVP23B-203ENST00000482741 EMILIN3Q9NT22 766 aa10.27□□□□□ -0.76
TVP23B-203ENST00000482741 ERBB3P21860 1342 aa10.27□□□□□ -0.77
TVP23B-203ENST00000482741 TCF3P15923 654 aa10.27□□□□□ -0.77
TVP23B-203ENST00000482741 PDE3BQ13370 1112 aa10.27□□□□□ -0.77
TVP23B-203ENST00000482741 BEGAINQ9BUH8 593 aa10.27□□□□□ -0.77
TVP23B-203ENST00000482741 PPP2R1AP30153 589 aa10.27□□□□□ -0.77
TVP23B-203ENST00000482741 HDGFL2Q7Z4V5 671 aaPredicted RBP10.27□□□□□ -0.77
TVP23B-203ENST00000482741 ZBED9Q6R2W3 1325 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms