RNA–Protein interactions for RNA: ENST00000482395.1

TRA2A-206, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-206ENST00000482395 ATG3Q9NT62 314 aa27.92■■■□□ 2.06
TRA2A-206ENST00000482395 AK7Q96M32 723 aa27.91■■■□□ 2.06
TRA2A-206ENST00000482395 ARXQ96QS3 562 aa27.91■■■□□ 2.06
TRA2A-206ENST00000482395 DCAF8L1A6NGE4 600 aa27.9■■■□□ 2.06
TRA2A-206ENST00000482395 MAP3K5Q99683 1374 aa27.89■■■□□ 2.06
TRA2A-206ENST00000482395 ADAMTS7Q9UKP4 1686 aa27.88■■■□□ 2.05
TRA2A-206ENST00000482395 COL5A3P25940 1745 aaPredicted RBP27.88■■■□□ 2.05
TRA2A-206ENST00000482395 ATP6V1AP38606 617 aa27.88■■■□□ 2.05
TRA2A-206ENST00000482395 COL23A1Q86Y22 540 aaPredicted RBP27.88■■■□□ 2.05
TRA2A-206ENST00000482395 CICQ96RK0 1608 aaPredicted RBP27.86■■■□□ 2.05
TRA2A-206ENST00000482395 U2SURPO15042 1029 aaKnown RBP27.86■■■□□ 2.05
TRA2A-206ENST00000482395 MSH5O43196 834 aa27.86■■■□□ 2.05
TRA2A-206ENST00000482395 MRC1P22897 1456 aa27.86■■■□□ 2.05
TRA2A-206ENST00000482395 SSFA2P28290 1259 aa27.85■■■□□ 2.05
TRA2A-206ENST00000482395 FHDC1Q9C0D6 1143 aaPredicted RBP27.85■■■□□ 2.05
TRA2A-206ENST00000482395 PPP2R1AP30153 589 aa27.84■■■□□ 2.05
TRA2A-206ENST00000482395 LINC00116Q8NCU8 138 aa27.84■■■□□ 2.05
TRA2A-206ENST00000482395 SYT17Q9BSW7 474 aa27.84■■■□□ 2.05
TRA2A-206ENST00000482395 ITPK1Q13572 414 aa27.83■■■□□ 2.05
TRA2A-206ENST00000482395 NUDCQ9Y266 331 aa27.83■■■□□ 2.05
TRA2A-206ENST00000482395 MTHFSDQ2M296 383 aaKnown RBP27.82■■■□□ 2.04
TRA2A-206ENST00000482395 NFATC2IPQ8NCF5 419 aa27.82■■■□□ 2.04
TRA2A-206ENST00000482395 RBM42Q9BTD8 480 aaKnown RBP27.82■■■□□ 2.04
TRA2A-206ENST00000482395 GAS2L2Q8NHY3 880 aa27.8■■■□□ 2.04
TRA2A-206ENST00000482395 SLC52A2Q9HAB3 445 aa27.8■■■□□ 2.04
TRA2A-206ENST00000482395 RNMTO43148 476 aaKnown RBP27.79■■■□□ 2.04
TRA2A-206ENST00000482395 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.78■■■□□ 2.04
TRA2A-206ENST00000482395 CNTNAP4Q9C0A0 1308 aa27.77■■■□□ 2.04
TRA2A-206ENST00000482395 GNPATO15228 680 aa27.77■■■□□ 2.04
TRA2A-206ENST00000482395 RC3H1Q5TC82 1133 aaKnown RBP27.77■■■□□ 2.04
TRA2A-206ENST00000482395 SLC4A9Q96Q91 983 aa27.77■■■□□ 2.04
TRA2A-206ENST00000482395 TJP1Q07157 1748 aa27.77■■■□□ 2.04
TRA2A-206ENST00000482395 PHF14O94880 888 aa27.76■■■□□ 2.03
TRA2A-206ENST00000482395 MYH14Q7Z406 1995 aaKnown RBP27.75■■■□□ 2.03
TRA2A-206ENST00000482395 LGR6Q9HBX8 967 aa27.75■■■□□ 2.03
TRA2A-206ENST00000482395 RTCBQ9Y3I0 505 aaKnown RBP27.74■■■□□ 2.03
TRA2A-206ENST00000482395 SIPA1L3O60292 1781 aaPredicted RBP27.73■■■□□ 2.03
TRA2A-206ENST00000482395 UBR2Q8IWV8 1755 aa27.73■■■□□ 2.03
TRA2A-206ENST00000482395 PTCD1O75127 700 aaKnown RBP27.73■■■□□ 2.03
TRA2A-206ENST00000482395 ADRA2BP18089 450 aa27.73■■■□□ 2.03
TRA2A-206ENST00000482395 AMIGO3Q86WK7 504 aa27.73■■■□□ 2.03
TRA2A-206ENST00000482395 RSPH6AQ9H0K4 717 aa27.73■■■□□ 2.03
TRA2A-206ENST00000482395 GNAT3A8MTJ3 354 aa27.72■■■□□ 2.03
TRA2A-206ENST00000482395 MSL1Q68DK7 614 aa27.72■■■□□ 2.03
TRA2A-206ENST00000482395 PRKAR2BP31323 418 aa27.71■■■□□ 2.03
TRA2A-206ENST00000482395 FCHSD2O94868 740 aa27.7■■■□□ 2.02
TRA2A-206ENST00000482395 U2AF1L5P0DN76 240 aaPredicted RBP27.7■■■□□ 2.02
TRA2A-206ENST00000482395 U2AF1Q01081 240 aaKnown RBP eCLIP27.7■■■□□ 2.02
TRA2A-206ENST00000482395 KLHL34Q8N239 644 aa27.7■■■□□ 2.02
TRA2A-206ENST00000482395 C4AP0C0L4 1744 aa27.7■■■□□ 2.02
TRA2A-206ENST00000482395 RPS6KA4O75676 772 aa27.69■■■□□ 2.02
TRA2A-206ENST00000482395 TRAPPC3LQ5T215 181 aa27.69■■■□□ 2.02
TRA2A-206ENST00000482395 CHD4Q14839 1912 aa27.69■■■□□ 2.02
TRA2A-206ENST00000482395 KCPQ6ZWJ8 1503 aa27.68■■■□□ 2.02
TRA2A-206ENST00000482395 TEFQ10587 303 aa27.67■■■□□ 2.02
TRA2A-206ENST00000482395 CRKLP46109 303 aaKnown RBP27.65■■■□□ 2.02
TRA2A-206ENST00000482395 RALBP1Q15311 655 aa27.65■■■□□ 2.02
TRA2A-206ENST00000482395 SMIM5Q71RC9 77 aa27.65■■■□□ 2.02
TRA2A-206ENST00000482395 VSIG10Q8N0Z9 540 aa27.65■■■□□ 2.02
TRA2A-206ENST00000482395 CEMIPQ8WUJ3 1361 aa27.64■■■□□ 2.02
TRA2A-206ENST00000482395 PHACTR3Q96KR7 559 aa27.64■■■□□ 2.02
TRA2A-206ENST00000482395 CD2APQ9Y5K6 639 aa27.64■■■□□ 2.02
TRA2A-206ENST00000482395 SLC39A6Q13433 755 aa27.63■■■□□ 2.01
TRA2A-206ENST00000482395 TTC5Q8N0Z6 440 aa27.63■■■□□ 2.01
TRA2A-206ENST00000482395 IL17REQ8NFR9 667 aa27.63■■■□□ 2.01
TRA2A-206ENST00000482395 NLGN1Q8N2Q7 840 aa27.62■■■□□ 2.01
TRA2A-206ENST00000482395 ARHGEF1Q92888 912 aaKnown RBP27.62■■■□□ 2.01
TRA2A-206ENST00000482395 NEFMP07197 916 aa27.61■■■□□ 2.01
TRA2A-206ENST00000482395 RFC4P35249 363 aa27.61■■■□□ 2.01
TRA2A-206ENST00000482395 YY1P25490 414 aa27.6■■■□□ 2.01
TRA2A-206ENST00000482395 DDX10Q13206 875 aaKnown RBP27.6■■■□□ 2.01
TRA2A-206ENST00000482395 DNAJC10Q8IXB1 793 aa27.6■■■□□ 2.01
TRA2A-206ENST00000482395 ZEB1P37275 1124 aaPredicted RBP27.59■■■□□ 2.01
TRA2A-206ENST00000482395 NLGN2Q8NFZ4 835 aa27.59■■■□□ 2.01
TRA2A-206ENST00000482395 RTF1Q92541 710 aaKnown RBP27.59■■■□□ 2.01
TRA2A-206ENST00000482395 CCDC87Q9NVE4 849 aa27.59■■■□□ 2.01
TRA2A-206ENST00000482395 DLG5Q8TDM6 1919 aa27.59■■■□□ 2.01
TRA2A-206ENST00000482395 KIF13BQ9NQT8 1826 aa27.58■■■□□ 2.01
TRA2A-206ENST00000482395 HTATSF1O43719 755 aaKnown RBP27.58■■■□□ 2.01
TRA2A-206ENST00000482395 GPR162Q16538 588 aa27.58■■■□□ 2.01
TRA2A-206ENST00000482395 PNNQ9H307 717 aaKnown RBP27.58■■■□□ 2.01
TRA2A-206ENST00000482395 ZNF790Q6PG37 636 aa27.57■■■□□ 2
TRA2A-206ENST00000482395 CYP19A1P11511 503 aaPredicted RBP27.56■■■□□ 2
TRA2A-206ENST00000482395 INTS5Q6P9B9 1019 aaKnown RBP27.56■■■□□ 2
TRA2A-206ENST00000482395 GYS1P13807 737 aa27.55■■■□□ 2
TRA2A-206ENST00000482395 MMP10P09238 476 aa27.54■■■□□ 2
TRA2A-206ENST00000482395 TEX13AQ9BXU3 409 aaPredicted RBP27.54■■■□□ 2
TRA2A-206ENST00000482395 HEG1Q9ULI3 1381 aa27.54■■■□□ 2
TRA2A-206ENST00000482395 SOS1Q07889 1333 aaPredicted RBP27.53■■■□□ 2
TRA2A-206ENST00000482395 USP42Q9H9J4 1324 aaKnown RBP27.53■■■□□ 2
TRA2A-206ENST00000482395 MYBBP1AQ9BQG0 1328 aaKnown RBP27.52■■■□□ 2
TRA2A-206ENST00000482395 BTBD11A6QL63 1104 aa27.52■■■□□ 2
TRA2A-206ENST00000482395 STARD3NLO95772 234 aa27.52■■■□□ 2
TRA2A-206ENST00000482395 FMNL2Q96PY5 1086 aa27.52■■■□□ 2
TRA2A-206ENST00000482395 ZNF496Q96IT1 587 aaPredicted RBP27.51■■□□□ 1.99
TRA2A-206ENST00000482395 COL15A1P39059 1388 aa27.5■■□□□ 1.99
TRA2A-206ENST00000482395 GRIN3BO60391 1043 aa27.5■■□□□ 1.99
TRA2A-206ENST00000482395 PELP1Q8IZL8 1130 aaKnown RBP27.5■■□□□ 1.99
TRA2A-206ENST00000482395 UTRNP46939 3433 aa27.5■■□□□ 1.99
TRA2A-206ENST00000482395 PLEKHF1Q96S99 279 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms