RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 ITPK1Q13572 414 aa14.19□□□□□ -0.14
CPSF4-212ENST00000482251 AMOTQ4VCS5 1084 aa14.19□□□□□ -0.14
CPSF4-212ENST00000482251 DCAF5Q96JK2 942 aa14.19□□□□□ -0.14
CPSF4-212ENST00000482251 HSP90AB1P08238 724 aaKnown RBP14.18□□□□□ -0.14
CPSF4-212ENST00000482251 ATP6V1AP38606 617 aa14.18□□□□□ -0.14
CPSF4-212ENST00000482251 CABP4P57796 275 aa14.18□□□□□ -0.14
CPSF4-212ENST00000482251 RBM42Q9BTD8 480 aaKnown RBP14.18□□□□□ -0.14
CPSF4-212ENST00000482251 SCN11AQ9UI33 1791 aa14.17□□□□□ -0.14
CPSF4-212ENST00000482251 GNPATO15228 680 aa14.17□□□□□ -0.14
CPSF4-212ENST00000482251 DIAPH1O60610 1272 aaKnown RBP14.17□□□□□ -0.14
CPSF4-212ENST00000482251 YY1P25490 414 aa14.17□□□□□ -0.14
CPSF4-212ENST00000482251 NPC1L1Q9UHC9 1359 aa14.17□□□□□ -0.14
CPSF4-212ENST00000482251 UTRNP46939 3433 aa14.16□□□□□ -0.14
CPSF4-212ENST00000482251 COL5A3P25940 1745 aaPredicted RBP14.16□□□□□ -0.14
CPSF4-212ENST00000482251 VIRMAQ69YN4 1812 aaKnown RBP14.16□□□□□ -0.14
CPSF4-212ENST00000482251 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.16□□□□□ -0.14
CPSF4-212ENST00000482251 ERVV-2B6SEH9 535 aa14.16□□□□□ -0.14
CPSF4-212ENST00000482251 NLGN2Q8NFZ4 835 aa14.16□□□□□ -0.14
CPSF4-212ENST00000482251 MAP3K5Q99683 1374 aa14.16□□□□□ -0.14
CPSF4-212ENST00000482251 U2SURPO15042 1029 aaKnown RBP14.15□□□□□ -0.14
CPSF4-212ENST00000482251 PELP1Q8IZL8 1130 aaKnown RBP14.15□□□□□ -0.14
CPSF4-212ENST00000482251 SLC4A9Q96Q91 983 aa14.15□□□□□ -0.14
CPSF4-212ENST00000482251 PTCD1O75127 700 aaKnown RBP14.14□□□□□ -0.15
CPSF4-212ENST00000482251 TJP1Q07157 1748 aa14.13□□□□□ -0.15
CPSF4-212ENST00000482251 AKAP4Q5JQC9 854 aa14.13□□□□□ -0.15
CPSF4-212ENST00000482251 NFATC2IPQ8NCF5 419 aa14.13□□□□□ -0.15
CPSF4-212ENST00000482251 FLAD1Q8NFF5 587 aa14.13□□□□□ -0.15
CPSF4-212ENST00000482251 ZNF831Q5JPB2 1677 aa14.13□□□□□ -0.15
CPSF4-212ENST00000482251 MRC1P22897 1456 aa14.12□□□□□ -0.15
CPSF4-212ENST00000482251 GOLGB1Q14789 3259 aaKnown RBP14.12□□□□□ -0.15
CPSF4-212ENST00000482251 SSFA2P28290 1259 aa14.12□□□□□ -0.15
CPSF4-212ENST00000482251 MTHFSDQ2M296 383 aaKnown RBP14.12□□□□□ -0.15
CPSF4-212ENST00000482251 C4AP0C0L4 1744 aa14.11□□□□□ -0.15
CPSF4-212ENST00000482251 HMGB2P26583 209 aaKnown RBP14.11□□□□□ -0.15
CPSF4-212ENST00000482251 GPR162Q16538 588 aa14.11□□□□□ -0.15
CPSF4-212ENST00000482251 LGR6Q9HBX8 967 aa14.11□□□□□ -0.15
CPSF4-212ENST00000482251 ADAMTS7Q9UKP4 1686 aa14.1□□□□□ -0.15
CPSF4-212ENST00000482251 MYH14Q7Z406 1995 aaKnown RBP14.09□□□□□ -0.15
CPSF4-212ENST00000482251 RNMTO43148 476 aaKnown RBP14.09□□□□□ -0.15
CPSF4-212ENST00000482251 SLC39A6Q13433 755 aa14.09□□□□□ -0.15
CPSF4-212ENST00000482251 SLC52A2Q9HAB3 445 aa14.09□□□□□ -0.15
CPSF4-212ENST00000482251 WWC3Q9ULE0 1092 aa14.09□□□□□ -0.15
CPSF4-212ENST00000482251 RTCBQ9Y3I0 505 aaKnown RBP14.09□□□□□ -0.15
CPSF4-212ENST00000482251 CNTNAP4Q9C0A0 1308 aa14.09□□□□□ -0.15
CPSF4-212ENST00000482251 CICQ96RK0 1608 aaPredicted RBP14.08□□□□□ -0.15
CPSF4-212ENST00000482251 PPP2R1AP30153 589 aa14.08□□□□□ -0.16
CPSF4-212ENST00000482251 CFAP53Q96M91 514 aa14.08□□□□□ -0.16
CPSF4-212ENST00000482251 KCPQ6ZWJ8 1503 aa14.08□□□□□ -0.16
CPSF4-212ENST00000482251 CRKLP46109 303 aaKnown RBP14.07□□□□□ -0.16
CPSF4-212ENST00000482251 CHD4Q14839 1912 aa14.06□□□□□ -0.16
CPSF4-212ENST00000482251 YBX3P16989 372 aaKnown RBP eCLIP14.06□□□□□ -0.16
CPSF4-212ENST00000482251 PRKAR2BP31323 418 aa14.06□□□□□ -0.16
CPSF4-212ENST00000482251 TRAPPC3LQ5T215 181 aa14.06□□□□□ -0.16
CPSF4-212ENST00000482251 UBR2Q8IWV8 1755 aa14.05□□□□□ -0.16
CPSF4-212ENST00000482251 MMP10P09238 476 aa14.05□□□□□ -0.16
CPSF4-212ENST00000482251 DNAJC10Q8IXB1 793 aa14.05□□□□□ -0.16
CPSF4-212ENST00000482251 ARHGEF1Q92888 912 aaKnown RBP14.05□□□□□ -0.16
CPSF4-212ENST00000482251 RSPH6AQ9H0K4 717 aa14.05□□□□□ -0.16
CPSF4-212ENST00000482251 RPS6KA4O75676 772 aa14.04□□□□□ -0.16
CPSF4-212ENST00000482251 U2AF1L5P0DN76 240 aaPredicted RBP14.04□□□□□ -0.16
CPSF4-212ENST00000482251 RFC4P35249 363 aa14.04□□□□□ -0.16
CPSF4-212ENST00000482251 U2AF1Q01081 240 aaKnown RBP eCLIP14.04□□□□□ -0.16
CPSF4-212ENST00000482251 RC3H1Q5TC82 1133 aaKnown RBP14.04□□□□□ -0.16
CPSF4-212ENST00000482251 GAS2L2Q8NHY3 880 aa14.04□□□□□ -0.16
CPSF4-212ENST00000482251 SRP68Q9UHB9 627 aaKnown RBP14.04□□□□□ -0.16
CPSF4-212ENST00000482251 SIPA1L3O60292 1781 aaPredicted RBP14.04□□□□□ -0.16
CPSF4-212ENST00000482251 GNAT3A8MTJ3 354 aa14.03□□□□□ -0.16
CPSF4-212ENST00000482251 PHACTR3Q96KR7 559 aa14.03□□□□□ -0.16
CPSF4-212ENST00000482251 CD2APQ9Y5K6 639 aa14.03□□□□□ -0.16
CPSF4-212ENST00000482251 GYS1P13807 737 aa14.02□□□□□ -0.17
CPSF4-212ENST00000482251 ADRA2BP18089 450 aa14.02□□□□□ -0.17
CPSF4-212ENST00000482251 TEFQ10587 303 aa14.02□□□□□ -0.17
CPSF4-212ENST00000482251 NUDCQ9Y266 331 aa14.02□□□□□ -0.17
CPSF4-212ENST00000482251 INTS5Q6P9B9 1019 aaKnown RBP14.01□□□□□ -0.17
CPSF4-212ENST00000482251 TTC5Q8N0Z6 440 aa14.01□□□□□ -0.17
CPSF4-212ENST00000482251 ZNF784Q8NCA9 323 aaPredicted RBP14.01□□□□□ -0.17
CPSF4-212ENST00000482251 IL17REQ8NFR9 667 aa14.01□□□□□ -0.17
CPSF4-212ENST00000482251 CCDC87Q9NVE4 849 aa14.01□□□□□ -0.17
CPSF4-212ENST00000482251 N4BP2Q86UW6 1770 aaPredicted RBP14.01□□□□□ -0.17
CPSF4-212ENST00000482251 KIAA1551Q9HCM1 1747 aa14.01□□□□□ -0.17
CPSF4-212ENST00000482251 C10orf71Q711Q0 1435 aa14□□□□□ -0.17
CPSF4-212ENST00000482251 USP42Q9H9J4 1324 aaKnown RBP14□□□□□ -0.17
CPSF4-212ENST00000482251 ZBTB1Q9Y2K1 713 aa14□□□□□ -0.17
CPSF4-212ENST00000482251 PXDNLA1KZ92 1463 aa13.99□□□□□ -0.17
CPSF4-212ENST00000482251 KIF13BQ9NQT8 1826 aa13.99□□□□□ -0.17
CPSF4-212ENST00000482251 COL15A1P39059 1388 aa13.99□□□□□ -0.17
CPSF4-212ENST00000482251 SOS1Q07889 1333 aaPredicted RBP13.99□□□□□ -0.17
CPSF4-212ENST00000482251 CYP19A1P11511 503 aaPredicted RBP13.99□□□□□ -0.17
CPSF4-212ENST00000482251 FKBP8Q14318 412 aa13.99□□□□□ -0.17
CPSF4-212ENST00000482251 NLGN1Q8N2Q7 840 aa13.99□□□□□ -0.17
CPSF4-212ENST00000482251 CEMIPQ8WUJ3 1361 aa13.98□□□□□ -0.17
CPSF4-212ENST00000482251 MCM10Q7L590 875 aa13.98□□□□□ -0.17
CPSF4-212ENST00000482251 ZNF496Q96IT1 587 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-212ENST00000482251 PARP3Q9Y6F1 533 aa13.98□□□□□ -0.17
CPSF4-212ENST00000482251 KCNQ3O43525 872 aa13.97□□□□□ -0.17
CPSF4-212ENST00000482251 CANXP27824 592 aaKnown RBP13.97□□□□□ -0.17
CPSF4-212ENST00000482251 DCTN1Q14203 1278 aa13.97□□□□□ -0.17
CPSF4-212ENST00000482251 USPL1Q5W0Q7 1092 aa13.97□□□□□ -0.17
CPSF4-212ENST00000482251 ZNF790Q6PG37 636 aa13.97□□□□□ -0.17
CPSF4-212ENST00000482251 HEG1Q9ULI3 1381 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms