RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 ATP10DQ9P241 1426 aa14.35□□□□□ -0.11
DDX39B-220ENST00000482195 EMILIN1Q9Y6C2 1016 aa14.35□□□□□ -0.11
DDX39B-220ENST00000482195 CDCA8Q53HL2 280 aa14.34□□□□□ -0.11
DDX39B-220ENST00000482195 PLCD3Q8N3E9 789 aa14.34□□□□□ -0.11
DDX39B-220ENST00000482195 FLAD1Q8NFF5 587 aa14.34□□□□□ -0.11
DDX39B-220ENST00000482195 WWC3Q9ULE0 1092 aa14.34□□□□□ -0.11
DDX39B-220ENST00000482195 CYP27B1O15528 508 aa14.33□□□□□ -0.12
DDX39B-220ENST00000482195 HMGB2P26583 209 aaKnown RBP14.33□□□□□ -0.12
DDX39B-220ENST00000482195 SMARCC1Q92922 1105 aaPredicted RBP14.33□□□□□ -0.12
DDX39B-220ENST00000482195 KIF24Q5T7B8 1368 aa14.33□□□□□ -0.12
DDX39B-220ENST00000482195 MIER1Q8N108 512 aa14.32□□□□□ -0.12
DDX39B-220ENST00000482195 ZNF526Q8TF50 670 aaPredicted RBP14.31□□□□□ -0.12
DDX39B-220ENST00000482195 CD2APQ9Y5K6 639 aa14.31□□□□□ -0.12
DDX39B-220ENST00000482195 SMIM5Q71RC9 77 aa14.3□□□□□ -0.12
DDX39B-220ENST00000482195 PIGBQ92521 554 aa14.3□□□□□ -0.12
DDX39B-220ENST00000482195 SPG7Q9UQ90 795 aa14.3□□□□□ -0.12
DDX39B-220ENST00000482195 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.29□□□□□ -0.12
DDX39B-220ENST00000482195 AMIGO3Q86WK7 504 aa14.29□□□□□ -0.12
DDX39B-220ENST00000482195 POLR3GLQ9BT43 218 aa14.29□□□□□ -0.12
DDX39B-220ENST00000482195 GPBP1L1Q9HC44 474 aaPredicted RBP14.29□□□□□ -0.12
DDX39B-220ENST00000482195 TMOD3Q9NYL9 352 aa14.29□□□□□ -0.12
DDX39B-220ENST00000482195 IGSF1Q8N6C5 1336 aa14.29□□□□□ -0.12
DDX39B-220ENST00000482195 ECM2O94769 699 aaPredicted RBP14.28□□□□□ -0.12
DDX39B-220ENST00000482195 N4BP2Q86UW6 1770 aaPredicted RBP14.28□□□□□ -0.12
DDX39B-220ENST00000482195 NCAPD2Q15021 1401 aa14.27□□□□□ -0.12
DDX39B-220ENST00000482195 LOC102724428A0A0B4J2F2 783 aa14.27□□□□□ -0.13
DDX39B-220ENST00000482195 GNPATO15228 680 aa14.27□□□□□ -0.13
DDX39B-220ENST00000482195 SIK1P57059 783 aa14.27□□□□□ -0.13
DDX39B-220ENST00000482195 LINC00116Q8NCU8 138 aa14.27□□□□□ -0.13
DDX39B-220ENST00000482195 CARD14Q9BXL6 1004 aa14.27□□□□□ -0.13
DDX39B-220ENST00000482195 CEP350Q5VT06 3117 aa14.27□□□□□ -0.13
DDX39B-220ENST00000482195 SSFA2P28290 1259 aa14.26□□□□□ -0.13
DDX39B-220ENST00000482195 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
DDX39B-220ENST00000482195 ADCY9O60503 1353 aa14.25□□□□□ -0.13
DDX39B-220ENST00000482195 ATP6V1AP38606 617 aa14.25□□□□□ -0.13
DDX39B-220ENST00000482195 TNNT2P45379 298 aaPredicted RBP14.25□□□□□ -0.13
DDX39B-220ENST00000482195 EYA1Q99502 592 aa14.25□□□□□ -0.13
DDX39B-220ENST00000482195 CICQ96RK0 1608 aaPredicted RBP14.25□□□□□ -0.13
DDX39B-220ENST00000482195 KIF13BQ9NQT8 1826 aa14.25□□□□□ -0.13
DDX39B-220ENST00000482195 NKX1-1Q15270 411 aaPredicted RBP14.24□□□□□ -0.13
DDX39B-220ENST00000482195 IFNL2Q8IZJ0 200 aa14.24□□□□□ -0.13
DDX39B-220ENST00000482195 ASAP1Q9ULH1 1129 aa14.24□□□□□ -0.13
DDX39B-220ENST00000482195 COL5A3P25940 1745 aaPredicted RBP14.24□□□□□ -0.13
DDX39B-220ENST00000482195 WASHC2AQ641Q2 1341 aa14.23□□□□□ -0.13
DDX39B-220ENST00000482195 PHKG2P15735 406 aa14.23□□□□□ -0.13
DDX39B-220ENST00000482195 ITPK1Q13572 414 aa14.23□□□□□ -0.13
DDX39B-220ENST00000482195 C4AP0C0L4 1744 aa14.22□□□□□ -0.13
DDX39B-220ENST00000482195 KIAA1551Q9HCM1 1747 aa14.22□□□□□ -0.13
DDX39B-220ENST00000482195 MMP10P09238 476 aa14.21□□□□□ -0.13
DDX39B-220ENST00000482195 RBM42Q9BTD8 480 aaKnown RBP14.21□□□□□ -0.13
DDX39B-220ENST00000482195 PXDNLA1KZ92 1463 aa14.2□□□□□ -0.14
DDX39B-220ENST00000482195 EIF4A2Q14240 407 aaKnown RBP14.2□□□□□ -0.14
DDX39B-220ENST00000482195 ATG3Q9NT62 314 aa14.2□□□□□ -0.14
DDX39B-220ENST00000482195 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.2□□□□□ -0.149e-20■□□□□ 9.5
DDX39B-220ENST00000482195 POLKQ9UBT6 870 aa14.2□□□□□ -0.14
DDX39B-220ENST00000482195 KDRP35968 1356 aa14.2□□□□□ -0.14
DDX39B-220ENST00000482195 ZNF831Q5JPB2 1677 aa14.2□□□□□ -0.14
DDX39B-220ENST00000482195 BRCA1P38398 1863 aaKnown RBP14.19□□□□□ -0.14
DDX39B-220ENST00000482195 HSPA6P17066 643 aa14.19□□□□□ -0.14
DDX39B-220ENST00000482195 RTCBQ9Y3I0 505 aaKnown RBP14.19□□□□□ -0.14
DDX39B-220ENST00000482195 MYH14Q7Z406 1995 aaKnown RBP14.18□□□□□ -0.14
DDX39B-220ENST00000482195 TRAPPC3LQ5T215 181 aa14.18□□□□□ -0.14
DDX39B-220ENST00000482195 BCS1LQ9Y276 419 aa14.18□□□□□ -0.14
DDX39B-220ENST00000482195 C10orf71Q711Q0 1435 aa14.17□□□□□ -0.14
DDX39B-220ENST00000482195 TRIM26Q12899 539 aaPredicted RBP14.17□□□□□ -0.14
DDX39B-220ENST00000482195 ZNF530Q6P9A1 599 aaPredicted RBP14.17□□□□□ -0.14
DDX39B-220ENST00000482195 VIRMAQ69YN4 1812 aaKnown RBP14.17□□□□□ -0.14
DDX39B-220ENST00000482195 ARFGEF1Q9Y6D6 1849 aa14.16□□□□□ -0.14
DDX39B-220ENST00000482195 RGL2O15211 777 aa14.16□□□□□ -0.14
DDX39B-220ENST00000482195 HSP90AB1P08238 724 aaKnown RBP14.16□□□□□ -0.14
DDX39B-220ENST00000482195 IFFO2Q5TF58 517 aa14.16□□□□□ -0.14
DDX39B-220ENST00000482195 CCDC87Q9NVE4 849 aa14.16□□□□□ -0.14
DDX39B-220ENST00000482195 KDM6AO15550 1401 aaPredicted RBP14.15□□□□□ -0.14
DDX39B-220ENST00000482195 A0A0G2JLW4 131 aa14.15□□□□□ -0.14
DDX39B-220ENST00000482195 RFC4P35249 363 aa14.15□□□□□ -0.14
DDX39B-220ENST00000482195 CABP4P57796 275 aa14.15□□□□□ -0.14
DDX39B-220ENST00000482195 PLEKHO1Q53GL0 409 aaPredicted RBP14.15□□□□□ -0.14
DDX39B-220ENST00000482195 BBXQ8WY36 941 aaPredicted RBP14.15□□□□□ -0.14
DDX39B-220ENST00000482195 DCAF5Q96JK2 942 aa14.15□□□□□ -0.14
DDX39B-220ENST00000482195 PARP3Q9Y6F1 533 aa14.15□□□□□ -0.14
DDX39B-220ENST00000482195 TJP1Q07157 1748 aa14.15□□□□□ -0.14
DDX39B-220ENST00000482195 SCN11AQ9UI33 1791 aa14.14□□□□□ -0.15
DDX39B-220ENST00000482195 PLEKHG2Q9H7P9 1386 aa14.14□□□□□ -0.15
DDX39B-220ENST00000482195 ERVV-2B6SEH9 535 aa14.14□□□□□ -0.15
DDX39B-220ENST00000482195 C1orf141Q5JVX7 400 aa14.14□□□□□ -0.15
DDX39B-220ENST00000482195 ARHGAP27Q6ZUM4 889 aa14.14□□□□□ -0.15
DDX39B-220ENST00000482195 NLGN1Q8N2Q7 840 aa14.14□□□□□ -0.15
DDX39B-220ENST00000482195 CNTNAP4Q9C0A0 1308 aa14.14□□□□□ -0.15
DDX39B-220ENST00000482195 KIF3CO14782 793 aa14.13□□□□□ -0.15
DDX39B-220ENST00000482195 FCHSD2O94868 740 aa14.13□□□□□ -0.15
DDX39B-220ENST00000482195 TGFB2P61812 414 aa14.13□□□□□ -0.15
DDX39B-220ENST00000482195 ARHGEF1Q92888 912 aaKnown RBP14.13□□□□□ -0.15
DDX39B-220ENST00000482195 SLC4A9Q96Q91 983 aa14.13□□□□□ -0.15
DDX39B-220ENST00000482195 PTCD1O75127 700 aaKnown RBP14.12□□□□□ -0.15
DDX39B-220ENST00000482195 GYS1P13807 737 aa14.12□□□□□ -0.15
DDX39B-220ENST00000482195 DPEP1P16444 411 aa14.12□□□□□ -0.15
DDX39B-220ENST00000482195 RPS6KA4O75676 772 aa14.11□□□□□ -0.15
DDX39B-220ENST00000482195 MTHFSP49914 203 aa14.11□□□□□ -0.15
DDX39B-220ENST00000482195 AMOTQ4VCS5 1084 aa14.11□□□□□ -0.15
DDX39B-220ENST00000482195 RC3H1Q5TC82 1133 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms