RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 SSFA2P28290 1259 aa26.48■■□□□ 1.83
CHPF2-203ENST00000482173 KNSTRNQ9Y448 316 aa26.47■■□□□ 1.83
CHPF2-203ENST00000482173 ERVV-2B6SEH9 535 aa26.46■■□□□ 1.83
CHPF2-203ENST00000482173 GNPATO15228 680 aa26.46■■□□□ 1.83
CHPF2-203ENST00000482173 HSP90AB1P08238 724 aaKnown RBP26.46■■□□□ 1.83
CHPF2-203ENST00000482173 DCAF5Q96JK2 942 aa26.46■■□□□ 1.83
CHPF2-203ENST00000482173 AMOTQ4VCS5 1084 aa26.44■■□□□ 1.82
CHPF2-203ENST00000482173 ZNF530Q6P9A1 599 aaPredicted RBP26.44■■□□□ 1.82
CHPF2-203ENST00000482173 AEBP1Q8IUX7 1158 aa26.43■■□□□ 1.82
CHPF2-203ENST00000482173 RBM42Q9BTD8 480 aaKnown RBP26.42■■□□□ 1.82
CHPF2-203ENST00000482173 CABP4P57796 275 aa26.41■■□□□ 1.82
CHPF2-203ENST00000482173 SULT6B1Q6IMI4 303 aa26.4■■□□□ 1.82
CHPF2-203ENST00000482173 SLC4A9Q96Q91 983 aa26.4■■□□□ 1.82
CHPF2-203ENST00000482173 GOLGB1Q14789 3259 aaKnown RBP26.4■■□□□ 1.82
CHPF2-203ENST00000482173 MTHFSP49914 203 aa26.39■■□□□ 1.82
CHPF2-203ENST00000482173 C1orf141Q5JVX7 400 aa26.39■■□□□ 1.82
CHPF2-203ENST00000482173 KDRP35968 1356 aa26.38■■□□□ 1.81
CHPF2-203ENST00000482173 C1QTNF8P60827 252 aa26.38■■□□□ 1.81
CHPF2-203ENST00000482173 RTCBQ9Y3I0 505 aaKnown RBP26.38■■□□□ 1.81
CHPF2-203ENST00000482173 KDM6AO15550 1401 aaPredicted RBP26.38■■□□□ 1.81
CHPF2-203ENST00000482173 IL13P35225 146 aa26.37■■□□□ 1.81
CHPF2-203ENST00000482173 TRAPPC3LQ5T215 181 aa26.37■■□□□ 1.81
CHPF2-203ENST00000482173 AMER1Q5JTC6 1135 aaPredicted RBP26.36■■□□□ 1.81
CHPF2-203ENST00000482173 RC3H1Q5TC82 1133 aaKnown RBP26.35■■□□□ 1.81
CHPF2-203ENST00000482173 KIF7Q2M1P5 1343 aa26.35■■□□□ 1.81
CHPF2-203ENST00000482173 GIGYF1O75420 1035 aaPredicted RBP26.33■■□□□ 1.81
CHPF2-203ENST00000482173 MMP10P09238 476 aa26.33■■□□□ 1.81
CHPF2-203ENST00000482173 NFATC2IPQ8NCF5 419 aa26.33■■□□□ 1.81
CHPF2-203ENST00000482173 WWC3Q9ULE0 1092 aa26.33■■□□□ 1.81
CHPF2-203ENST00000482173 ZNF831Q5JPB2 1677 aa26.32■■□□□ 1.8
CHPF2-203ENST00000482173 PTCD1O75127 700 aaKnown RBP26.32■■□□□ 1.8
CHPF2-203ENST00000482173 NLGN1Q8N2Q7 840 aa26.31■■□□□ 1.8
CHPF2-203ENST00000482173 ARHGEF1Q92888 912 aaKnown RBP26.31■■□□□ 1.8
CHPF2-203ENST00000482173 CNTNAP4Q9C0A0 1308 aa26.31■■□□□ 1.8
CHPF2-203ENST00000482173 SENP3-EIF4A1A0A087X0R7 540 aa26.3■■□□□ 1.8
CHPF2-203ENST00000482173 RPS6KA4O75676 772 aa26.3■■□□□ 1.8
CHPF2-203ENST00000482173 ADRA2BP18089 450 aa26.3■■□□□ 1.8
CHPF2-203ENST00000482173 RFC4P35249 363 aa26.29■■□□□ 1.8
CHPF2-203ENST00000482173 COL5A3P25940 1745 aaPredicted RBP26.28■■□□□ 1.8
CHPF2-203ENST00000482173 PER1O15534 1290 aaPredicted RBP26.26■■□□□ 1.79
CHPF2-203ENST00000482173 AKAP4Q5JQC9 854 aa26.26■■□□□ 1.79
CHPF2-203ENST00000482173 ATP10DQ9P241 1426 aa26.25■■□□□ 1.79
CHPF2-203ENST00000482173 HMOX1P09601 288 aa26.25■■□□□ 1.79
CHPF2-203ENST00000482173 GYS1P13807 737 aa26.25■■□□□ 1.79
CHPF2-203ENST00000482173 CC2D1BQ5T0F9 858 aaKnown RBP26.25■■□□□ 1.79
CHPF2-203ENST00000482173 MYH14Q7Z406 1995 aaKnown RBP26.25■■□□□ 1.79
CHPF2-203ENST00000482173 SCN11AQ9UI33 1791 aa26.23■■□□□ 1.79
CHPF2-203ENST00000482173 CRKLP46109 303 aaKnown RBP26.23■■□□□ 1.79
CHPF2-203ENST00000482173 CICQ96RK0 1608 aaPredicted RBP26.22■■□□□ 1.79
CHPF2-203ENST00000482173 LGR6Q9HBX8 967 aa26.22■■□□□ 1.79
CHPF2-203ENST00000482173 DIAPH1O60610 1272 aaKnown RBP26.21■■□□□ 1.79
CHPF2-203ENST00000482173 TGFB2P61812 414 aa26.21■■□□□ 1.79
CHPF2-203ENST00000482173 CCDC87Q9NVE4 849 aa26.21■■□□□ 1.79
CHPF2-203ENST00000482173 PARP3Q9Y6F1 533 aa26.21■■□□□ 1.79
CHPF2-203ENST00000482173 SLC52A2Q9HAB3 445 aa26.2■■□□□ 1.78
CHPF2-203ENST00000482173 GPBP1L1Q9HC44 474 aaPredicted RBP26.2■■□□□ 1.78
CHPF2-203ENST00000482173 KIF13BQ9NQT8 1826 aa26.19■■□□□ 1.78
CHPF2-203ENST00000482173 PXDNLA1KZ92 1463 aa26.19■■□□□ 1.78
CHPF2-203ENST00000482173 A0A0G2JLW4 131 aa26.19■■□□□ 1.78
CHPF2-203ENST00000482173 RNMTO43148 476 aaKnown RBP26.18■■□□□ 1.78
CHPF2-203ENST00000482173 CNGB1Q14028 1251 aaPredicted RBP26.18■■□□□ 1.78
CHPF2-203ENST00000482173 ZNF526Q8TF50 670 aaPredicted RBP26.18■■□□□ 1.78
CHPF2-203ENST00000482173 SRP68Q9UHB9 627 aaKnown RBP26.18■■□□□ 1.78
CHPF2-203ENST00000482173 ADCY9O60503 1353 aa26.18■■□□□ 1.78
CHPF2-203ENST00000482173 C4AP0C0L4 1744 aa26.17■■□□□ 1.78
CHPF2-203ENST00000482173 C10orf71Q711Q0 1435 aa26.17■■□□□ 1.78
CHPF2-203ENST00000482173 MTHFSDQ2M296 383 aaKnown RBP26.17■■□□□ 1.78
CHPF2-203ENST00000482173 INTS5Q6P9B9 1019 aaKnown RBP26.17■■□□□ 1.78
CHPF2-203ENST00000482173 N4BP2Q86UW6 1770 aaPredicted RBP26.17■■□□□ 1.78
CHPF2-203ENST00000482173 TJP1Q07157 1748 aa26.17■■□□□ 1.78
CHPF2-203ENST00000482173 DNAJC10Q8IXB1 793 aa26.16■■□□□ 1.78
CHPF2-203ENST00000482173 BCS1LQ9Y276 419 aa26.16■■□□□ 1.78
CHPF2-203ENST00000482173 DPEP1P16444 411 aa26.15■■□□□ 1.78
CHPF2-203ENST00000482173 SLC39A6Q13433 755 aa26.15■■□□□ 1.78
CHPF2-203ENST00000482173 USP42Q9H9J4 1324 aaKnown RBP26.14■■□□□ 1.78
CHPF2-203ENST00000482173 KIAA1551Q9HCM1 1747 aa26.14■■□□□ 1.78
CHPF2-203ENST00000482173 FKBP8Q14318 412 aa26.14■■□□□ 1.78
CHPF2-203ENST00000482173 VIRMAQ69YN4 1812 aaKnown RBP26.11■■□□□ 1.77
CHPF2-203ENST00000482173 MRC1P22897 1456 aa26.11■■□□□ 1.77
CHPF2-203ENST00000482173 NPC1L1Q9UHC9 1359 aa26.1■■□□□ 1.77
CHPF2-203ENST00000482173 U2SURPO15042 1029 aaKnown RBP26.1■■□□□ 1.77
CHPF2-203ENST00000482173 ZPR1O75312 459 aa26.1■■□□□ 1.77
CHPF2-203ENST00000482173 FCHSD2O94868 740 aa26.1■■□□□ 1.77
CHPF2-203ENST00000482173 CYP19A1P11511 503 aaPredicted RBP26.1■■□□□ 1.77
CHPF2-203ENST00000482173 DDR1Q08345 913 aa26.1■■□□□ 1.77
CHPF2-203ENST00000482173 ARHGAP27Q6ZUM4 889 aa26.1■■□□□ 1.77
CHPF2-203ENST00000482173 KCNA3P22001 575 aa26.08■■□□□ 1.77
CHPF2-203ENST00000482173 SOS1Q07889 1333 aaPredicted RBP26.08■■□□□ 1.77
CHPF2-203ENST00000482173 USPL1Q5W0Q7 1092 aa26.07■■□□□ 1.76
CHPF2-203ENST00000482173 TM4SF1P30408 202 aa26.06■■□□□ 1.76
CHPF2-203ENST00000482173 PIM2Q9P1W9 311 aa26.06■■□□□ 1.76
CHPF2-203ENST00000482173 ADAMTS7Q9UKP4 1686 aa26.06■■□□□ 1.76
CHPF2-203ENST00000482173 COL3A1P02461 1466 aaPredicted RBP26.05■■□□□ 1.76
CHPF2-203ENST00000482173 KCPQ6ZWJ8 1503 aa26.05■■□□□ 1.76
CHPF2-203ENST00000482173 VSIG10Q8N0Z9 540 aa26.05■■□□□ 1.76
CHPF2-203ENST00000482173 POLRMTO00411 1230 aaKnown RBP26.04■■□□□ 1.76
CHPF2-203ENST00000482173 NARFQ9UHQ1 456 aa26.04■■□□□ 1.76
CHPF2-203ENST00000482173 ZBTB1Q9Y2K1 713 aa26.04■■□□□ 1.76
CHPF2-203ENST00000482173 BRCA1P38398 1863 aaKnown RBP26.03■■□□□ 1.76
CHPF2-203ENST00000482173 GNAT3A8MTJ3 354 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 245.8 ms